BLASTX nr result

ID: Coptis23_contig00008458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008458
         (1087 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABS52645.1| GEM-like 1 [Vitis vinifera]                            349   6e-94
gb|ACU23491.1| unknown [Glycine max]                                  348   1e-93
ref|XP_002285708.1| PREDICTED: GEM-like 1 [Vitis vinifera]            347   3e-93
ref|XP_003526540.1| PREDICTED: GEM-like protein 1-like [Glycine ...   347   4e-93
ref|XP_003602953.1| GLABRA2 expression modulator [Medicago trunc...   341   2e-91

>gb|ABS52645.1| GEM-like 1 [Vitis vinifera]
          Length = 284

 Score =  349 bits (896), Expect = 6e-94
 Identities = 179/261 (68%), Positives = 201/261 (77%), Gaps = 32/261 (12%)
 Frame = -2

Query: 999 SSDYAPYPKLNSDDITPP--------IFGSDP-----NKPGPVSES-------------- 901
           S+DYAPYPKL+ +D+ PP        I    P     N   P+SES              
Sbjct: 21  SADYAPYPKLDPNDVAPPKEDWTTVTISSQTPHPVSQNSGSPISESASEGPAPIARNSAT 80

Query: 900 -----NNPYITASPAPSSSVKITVDSVKDTLGRWGKKVDEATKKAGDLAGNVWQHLKTAP 736
                +NPYI++SPAP+SS+K  +DSVKD LG+WGKK  EATKKA DLAGN+WQHLKT P
Sbjct: 81  TMPVESNPYISSSPAPASSMKNKMDSVKDVLGKWGKKAAEATKKAEDLAGNMWQHLKTGP 140

Query: 735 SVTDAAMGRIAQSTKVLAEGGYDKIFQQTFETVPEEQLLKSYACYLSTSAGPVMGILYLS 556
           S  DAA+GRIAQ TKVLAEGGY+KIFQQTFETVPEEQL KSYACYLSTSAGPVMGILYLS
Sbjct: 141 SFADAAVGRIAQGTKVLAEGGYEKIFQQTFETVPEEQLQKSYACYLSTSAGPVMGILYLS 200

Query: 555 TAKLAFSSDSPLSYKEGDKTEWSYYKVVIPLHQFKAINTSASKANPAEKYIQIISVDNHE 376
           T KLAF SDSPLSYK G++TEWSYYKVVIPLHQ KA+NTS SK NPAEKY+QIISVDNHE
Sbjct: 201 TEKLAFCSDSPLSYKVGEQTEWSYYKVVIPLHQLKAVNTSTSKVNPAEKYVQIISVDNHE 260

Query: 375 FWYMGFVNYDSAVNSLQEALQ 313
           FW+MGFV+YDSAV +LQ ALQ
Sbjct: 261 FWFMGFVHYDSAVKNLQGALQ 281


>gb|ACU23491.1| unknown [Glycine max]
          Length = 269

 Score =  348 bits (893), Expect = 1e-93
 Identities = 168/238 (70%), Positives = 195/238 (81%), Gaps = 8/238 (3%)
 Frame = -2

Query: 1002 HSSDYAPYPKLNSDDITPPIFGSDPNKPGPVSES--------NNPYITASPAPSSSVKIT 847
            HS DYAPYPKL+  D+ PP    +     P+SE         +NPY+T +PA +SS K T
Sbjct: 30   HSGDYAPYPKLDPTDVAPPQQPLNTESRAPISEDAATTMPKDSNPYVTPAPATASSTKTT 89

Query: 846  VDSVKDTLGRWGKKVDEATKKAGDLAGNVWQHLKTAPSVTDAAMGRIAQSTKVLAEGGYD 667
            +DSVKD LG+WGKK  EATKKA DLAGN+WQHLKT PS  DAA+GRIAQ TKVLAEGGY+
Sbjct: 90   LDSVKDVLGKWGKKAAEATKKAEDLAGNMWQHLKTGPSFADAAVGRIAQGTKVLAEGGYE 149

Query: 666  KIFQQTFETVPEEQLLKSYACYLSTSAGPVMGILYLSTAKLAFSSDSPLSYKEGDKTEWS 487
            KIF+QTFETVPEEQLLK+YACYLSTSAGPVMG+LYLSTAKLAF SD+PLSY+ GD+T+WS
Sbjct: 150  KIFRQTFETVPEEQLLKTYACYLSTSAGPVMGVLYLSTAKLAFCSDNPLSYQVGDQTQWS 209

Query: 486  YYKVVIPLHQFKAINTSASKANPAEKYIQIISVDNHEFWYMGFVNYDSAVNSLQEALQ 313
            YYKVVIPLHQ +A+N S SK N +EKYIQIISVDNHEFW+MGFV+YDSAV ++Q ALQ
Sbjct: 210  YYKVVIPLHQLRAVNASTSKTNQSEKYIQIISVDNHEFWFMGFVHYDSAVKNIQGALQ 267


>ref|XP_002285708.1| PREDICTED: GEM-like 1 [Vitis vinifera]
          Length = 284

 Score =  347 bits (890), Expect = 3e-93
 Identities = 178/261 (68%), Positives = 200/261 (76%), Gaps = 32/261 (12%)
 Frame = -2

Query: 999 SSDYAPYPKLNSDDITPP--------IFGSDP-----NKPGPVSES-------------- 901
           S+DYAPYPKL+ +D+ PP        I    P     N   P+SES              
Sbjct: 21  SADYAPYPKLDPNDVAPPKEDWTTVTISSQTPHPVSQNSGSPISESASEGPAPIARNSAT 80

Query: 900 -----NNPYITASPAPSSSVKITVDSVKDTLGRWGKKVDEATKKAGDLAGNVWQHLKTAP 736
                +NPYI++SPAP+SS+K  +DSVKD LG+WGKK  EATKKA DLAGN+WQHLK  P
Sbjct: 81  TMPVESNPYISSSPAPASSMKNKMDSVKDVLGKWGKKAAEATKKAEDLAGNMWQHLKMGP 140

Query: 735 SVTDAAMGRIAQSTKVLAEGGYDKIFQQTFETVPEEQLLKSYACYLSTSAGPVMGILYLS 556
           S  DAA+GRIAQ TKVLAEGGY+KIFQQTFETVPEEQL KSYACYLSTSAGPVMGILYLS
Sbjct: 141 SFADAAVGRIAQGTKVLAEGGYEKIFQQTFETVPEEQLQKSYACYLSTSAGPVMGILYLS 200

Query: 555 TAKLAFSSDSPLSYKEGDKTEWSYYKVVIPLHQFKAINTSASKANPAEKYIQIISVDNHE 376
           T KLAF SDSPLSYK G++TEWSYYKVVIPLHQ KA+NTS SK NPAEKY+QIISVDNHE
Sbjct: 201 TEKLAFCSDSPLSYKVGEQTEWSYYKVVIPLHQLKAVNTSTSKVNPAEKYVQIISVDNHE 260

Query: 375 FWYMGFVNYDSAVNSLQEALQ 313
           FW+MGFV+YDSAV +LQ ALQ
Sbjct: 261 FWFMGFVHYDSAVKNLQGALQ 281


>ref|XP_003526540.1| PREDICTED: GEM-like protein 1-like [Glycine max]
          Length = 269

 Score =  347 bits (889), Expect = 4e-93
 Identities = 167/238 (70%), Positives = 194/238 (81%), Gaps = 8/238 (3%)
 Frame = -2

Query: 1002 HSSDYAPYPKLNSDDITPPIFGSDPNKPGPVSES--------NNPYITASPAPSSSVKIT 847
            HS DYAPYPKL+  D+ PP    +     P+SE         +NPY+T +P  +SS K T
Sbjct: 30   HSGDYAPYPKLDPTDVAPPQQPLNTESRAPISEDAATTMPKDSNPYVTPAPVTASSTKTT 89

Query: 846  VDSVKDTLGRWGKKVDEATKKAGDLAGNVWQHLKTAPSVTDAAMGRIAQSTKVLAEGGYD 667
            +DSVKD LG+WGKK  EATKKA DLAGN+WQHLKT PS  DAA+GRIAQ TKVLAEGGY+
Sbjct: 90   LDSVKDVLGKWGKKAAEATKKAEDLAGNMWQHLKTGPSFADAAVGRIAQGTKVLAEGGYE 149

Query: 666  KIFQQTFETVPEEQLLKSYACYLSTSAGPVMGILYLSTAKLAFSSDSPLSYKEGDKTEWS 487
            KIF+QTFETVPEEQLLK+YACYLSTSAGPVMG+LYLSTAKLAF SD+PLSY+ GD+T+WS
Sbjct: 150  KIFRQTFETVPEEQLLKTYACYLSTSAGPVMGVLYLSTAKLAFCSDNPLSYQVGDQTQWS 209

Query: 486  YYKVVIPLHQFKAINTSASKANPAEKYIQIISVDNHEFWYMGFVNYDSAVNSLQEALQ 313
            YYKVVIPLHQ +A+N S SK N +EKYIQIISVDNHEFW+MGFV+YDSAV ++Q ALQ
Sbjct: 210  YYKVVIPLHQLRAVNASTSKTNQSEKYIQIISVDNHEFWFMGFVHYDSAVKNIQGALQ 267


>ref|XP_003602953.1| GLABRA2 expression modulator [Medicago truncatula]
            gi|355492001|gb|AES73204.1| GLABRA2 expression modulator
            [Medicago truncatula]
          Length = 258

 Score =  341 bits (874), Expect = 2e-91
 Identities = 168/246 (68%), Positives = 197/246 (80%), Gaps = 14/246 (5%)
 Frame = -2

Query: 1002 HSSDYAPYPKLNSDDITPPIFGSDPNKPGPVSESN-------------NPYITASPAPS- 865
            H+ DYAPYPKL+ +D+ PP        P PV+  +             NPY++ +P P+ 
Sbjct: 21   HTPDYAPYPKLDPNDVAPP--------PPPVATESRATDAATTMPAESNPYVSPAPVPAP 72

Query: 864  SSVKITVDSVKDTLGRWGKKVDEATKKAGDLAGNVWQHLKTAPSVTDAAMGRIAQSTKVL 685
            +S K T+DSVKD LG+WGKK  EATKKA DLAGN+WQHLKT PS  DAA+GRIAQ TKVL
Sbjct: 73   TSAKNTLDSVKDVLGKWGKKAAEATKKAEDLAGNMWQHLKTGPSFADAAVGRIAQGTKVL 132

Query: 684  AEGGYDKIFQQTFETVPEEQLLKSYACYLSTSAGPVMGILYLSTAKLAFSSDSPLSYKEG 505
            AEGGY+KIF+QTFETVPEEQLLK+YACYLSTSAGPVMG+LYLSTAKLAF SD+PLSY+ G
Sbjct: 133  AEGGYEKIFRQTFETVPEEQLLKTYACYLSTSAGPVMGVLYLSTAKLAFCSDNPLSYQTG 192

Query: 504  DKTEWSYYKVVIPLHQFKAINTSASKANPAEKYIQIISVDNHEFWYMGFVNYDSAVNSLQ 325
            D+T+WSYYKVVIPLHQ +A+N S SKANP EK+IQIISVDNHEFW+MGFV YDSAV  +Q
Sbjct: 193  DQTQWSYYKVVIPLHQLRAVNPSTSKANPTEKFIQIISVDNHEFWFMGFVYYDSAVKHIQ 252

Query: 324  EALQTR 307
            EALQ+R
Sbjct: 253  EALQSR 258


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