BLASTX nr result

ID: Coptis23_contig00008456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008456
         (1584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282375.1| PREDICTED: probable RNA 3'-terminal phosphat...   518   e-144
ref|XP_002534151.1| RNA 3' terminal phosphate cyclase, putative ...   510   e-142
ref|XP_002298266.1| predicted protein [Populus trichocarpa] gi|2...   495   e-137
ref|XP_002313504.1| predicted protein [Populus trichocarpa] gi|2...   486   e-135
ref|NP_001242399.1| uncharacterized protein LOC100778883 [Glycin...   478   e-132

>ref|XP_002282375.1| PREDICTED: probable RNA 3'-terminal phosphate cyclase-like protein
            [Vitis vinifera] gi|296087784|emb|CBI35040.3| unnamed
            protein product [Vitis vinifera]
          Length = 376

 Score =  518 bits (1335), Expect = e-144
 Identities = 257/334 (76%), Positives = 284/334 (85%)
 Frame = +1

Query: 106  PVLIDDIRHEDTWPGLRPHEISLLRLLEKITDDCLVEINETGTKLKYKPGVIVGGRNLVH 285
            PVLIDDIRH+DTWPGLRP+E+SLLRL EKI DDC+VEINETGTKLKYKPG+I+GG+NLVH
Sbjct: 28   PVLIDDIRHDDTWPGLRPYEVSLLRLFEKICDDCVVEINETGTKLKYKPGIIMGGKNLVH 87

Query: 286  DCGLSRSIGYFLEPLLVLGVFGKKPLSIRLKGITNDSKDPSVDTFKRTTLPLLKRFGVPS 465
            DCG+ RSIGYFLEPL+VLG+FGKKPLSI LKGITNDSKDPSVDTF+ TTL +LK FGVPS
Sbjct: 88   DCGVGRSIGYFLEPLIVLGLFGKKPLSITLKGITNDSKDPSVDTFQSTTLSILKHFGVPS 147

Query: 466  EGLDLKIESRGSPPQGGGEVLLGIPIVPNSLSAVTWIDEGMVKRIRGTAFSTKVSYQFEK 645
            EGL L I +R  PP GGGEV L IPIV NSL+AVTWIDEGMVKRIRG  F+++VS QFE 
Sbjct: 148  EGLKLTIRNRAPPPHGGGEVELKIPIVQNSLTAVTWIDEGMVKRIRGLTFTSRVSSQFEH 207

Query: 646  TMIHAARGVFNRLLPDVHIFQDHRSGQEAGKSPGYGISLVAETTTGCFISTDTAVCYARG 825
            TM +AARG+FNRLLPDVHI   H    + GKSPGYGIS+VAETT+GCFIS DTAV Y RG
Sbjct: 208  TMRYAARGIFNRLLPDVHISTYH---SKTGKSPGYGISVVAETTSGCFISADTAVSYGRG 264

Query: 826  EXXXXXXXXERKELMPPADVGEQAASMLLGEIEQGGVVDSMHQGILFILCALCPQDVSKV 1005
            E        E  ELMPP +VGEQ AS+LLGEIEQGGVVDS HQG+LF+LCALCPQDVSK+
Sbjct: 265  EESGEDKDEENNELMPPEEVGEQIASVLLGEIEQGGVVDSTHQGLLFLLCALCPQDVSKI 324

Query: 1006 RVGKLSPYAIETLRHIRDFLDVKFVITPDSSTET 1107
            RVGKLSP  IETLRHIRDFL VKFVI PD STET
Sbjct: 325  RVGKLSPNGIETLRHIRDFLGVKFVIKPDPSTET 358


>ref|XP_002534151.1| RNA 3' terminal phosphate cyclase, putative [Ricinus communis]
            gi|223525786|gb|EEF28234.1| RNA 3' terminal phosphate
            cyclase, putative [Ricinus communis]
          Length = 377

 Score =  510 bits (1314), Expect = e-142
 Identities = 247/334 (73%), Positives = 286/334 (85%)
 Frame = +1

Query: 106  PVLIDDIRHEDTWPGLRPHEISLLRLLEKITDDCLVEINETGTKLKYKPGVIVGGRNLVH 285
            P+LI+DIR +DT PGLR HE+S LRLLE+I+DDC +EINETGTK KYKPG+++GG++ VH
Sbjct: 28   PLLIEDIRADDTLPGLRSHEVSFLRLLERISDDCHIEINETGTKFKYKPGIVMGGKHHVH 87

Query: 286  DCGLSRSIGYFLEPLLVLGVFGKKPLSIRLKGITNDSKDPSVDTFKRTTLPLLKRFGVPS 465
            DCG+SRS+GYFLEPL+VL +F KKPL IRL+GITNDSKDP VDTF+ TTLP+LKRFGVPS
Sbjct: 88   DCGVSRSVGYFLEPLIVLALFAKKPLEIRLRGITNDSKDPCVDTFRSTTLPMLKRFGVPS 147

Query: 466  EGLDLKIESRGSPPQGGGEVLLGIPIVPNSLSAVTWIDEGMVKRIRGTAFSTKVSYQFEK 645
            EGL LKIESRGSPP GGGEV+L +PIV  SL AVTW DEGM+KRIRG  +ST+VS QFE 
Sbjct: 148  EGLGLKIESRGSPPHGGGEVVLSVPIV-QSLQAVTWTDEGMIKRIRGVTYSTRVSSQFEN 206

Query: 646  TMIHAARGVFNRLLPDVHIFQDHRSGQEAGKSPGYGISLVAETTTGCFISTDTAVCYARG 825
            TMIHAARG+FN LLPDVHIF DH++G +AG SPGYGISLVAETT+GCF+S DTA+ YARG
Sbjct: 207  TMIHAARGIFNHLLPDVHIFTDHKAGPQAGNSPGYGISLVAETTSGCFLSADTAISYARG 266

Query: 826  EXXXXXXXXERKELMPPADVGEQAASMLLGEIEQGGVVDSMHQGILFILCALCPQDVSKV 1005
            +        E+K+LMPP DVGEQ AS+LL E+EQGGVVDS HQ +LF+LCALCPQDVSK+
Sbjct: 267  D-DIGEMEDEKKDLMPPEDVGEQIASVLLEEVEQGGVVDSTHQALLFLLCALCPQDVSKI 325

Query: 1006 RVGKLSPYAIETLRHIRDFLDVKFVITPDSSTET 1107
            RVGKLSPY IETLR IRDFL VKFVI PD ST T
Sbjct: 326  RVGKLSPYGIETLRSIRDFLGVKFVIKPDPSTGT 359


>ref|XP_002298266.1| predicted protein [Populus trichocarpa] gi|222845524|gb|EEE83071.1|
            predicted protein [Populus trichocarpa]
          Length = 376

 Score =  495 bits (1274), Expect = e-137
 Identities = 248/334 (74%), Positives = 283/334 (84%)
 Frame = +1

Query: 106  PVLIDDIRHEDTWPGLRPHEISLLRLLEKITDDCLVEINETGTKLKYKPGVIVGGRNLVH 285
            P++I  IR  D  PGLR HE+SLLRLLEKI+DDC+V+INETGT ++YKPG+++GGR+LVH
Sbjct: 28   PIIIKGIRANDMLPGLRLHEVSLLRLLEKISDDCVVKINETGTMVQYKPGILMGGRHLVH 87

Query: 286  DCGLSRSIGYFLEPLLVLGVFGKKPLSIRLKGITNDSKDPSVDTFKRTTLPLLKRFGVPS 465
            DCG SR+IGYFLEPLLVLG+F KK LSIRLKGITNDS DP VDTF+ TTLPLLK+FGVPS
Sbjct: 88   DCGESRAIGYFLEPLLVLGLFSKKALSIRLKGITNDSNDPCVDTFRSTTLPLLKQFGVPS 147

Query: 466  EGLDLKIESRGSPPQGGGEVLLGIPIVPNSLSAVTWIDEGMVKRIRGTAFSTKVSYQFEK 645
            EGL+LKIESRG+PP GGGEVLL IP +  SL+AVTWIDEGMV+RIRG  FST+VS QFE 
Sbjct: 148  EGLELKIESRGAPPHGGGEVLLSIPNI-QSLTAVTWIDEGMVRRIRGVTFSTRVSSQFEN 206

Query: 646  TMIHAARGVFNRLLPDVHIFQDHRSGQEAGKSPGYGISLVAETTTGCFISTDTAVCYARG 825
            TMIHAARG+FN LLPDVHIF DH++G +AG SPGYGISLVAETT+GCFIS +TAV YAR 
Sbjct: 207  TMIHAARGIFNHLLPDVHIFTDHKAGPQAGNSPGYGISLVAETTSGCFISANTAVSYART 266

Query: 826  EXXXXXXXXERKELMPPADVGEQAASMLLGEIEQGGVVDSMHQGILFILCALCPQDVSKV 1005
            E        E+ ELMPP DVGEQ AS+LL EIEQGGVVD+ HQG+LF+LCALCPQDVSK+
Sbjct: 267  E--DGGMEDEKGELMPPEDVGEQIASVLLQEIEQGGVVDTTHQGLLFLLCALCPQDVSKI 324

Query: 1006 RVGKLSPYAIETLRHIRDFLDVKFVITPDSSTET 1107
            RVGKL P+ IE LR IRDFL VKFVI PD ST T
Sbjct: 325  RVGKLIPHGIEVLRLIRDFLGVKFVIKPDPSTGT 358


>ref|XP_002313504.1| predicted protein [Populus trichocarpa] gi|222849912|gb|EEE87459.1|
            predicted protein [Populus trichocarpa]
          Length = 340

 Score =  486 bits (1251), Expect = e-135
 Identities = 237/316 (75%), Positives = 276/316 (87%)
 Frame = +1

Query: 106  PVLIDDIRHEDTWPGLRPHEISLLRLLEKITDDCLVEINETGTKLKYKPGVIVGGRNLVH 285
            PV ++DIR  D  PGLRPHE+SLLRLLEKI+DDC+V+INETGTK +YKPG+++GGR+LVH
Sbjct: 28   PVQVEDIRANDMMPGLRPHEVSLLRLLEKISDDCVVKINETGTKFQYKPGIVMGGRHLVH 87

Query: 286  DCGLSRSIGYFLEPLLVLGVFGKKPLSIRLKGITNDSKDPSVDTFKRTTLPLLKRFGVPS 465
            DCG+SR+IGYFLEPL+VLG+F KKPLSIRLKGITNDSKDP VDTF+  TLPLLK+FGVPS
Sbjct: 88   DCGVSRAIGYFLEPLVVLGLFSKKPLSIRLKGITNDSKDPCVDTFRSATLPLLKQFGVPS 147

Query: 466  EGLDLKIESRGSPPQGGGEVLLGIPIVPNSLSAVTWIDEGMVKRIRGTAFSTKVSYQFEK 645
            EGL+LKIESRG+PP GGGEVLL +PI+  SL+AVTWIDEGMVKRIRG  FST+VS QFE 
Sbjct: 148  EGLELKIESRGAPPHGGGEVLLSVPII-QSLTAVTWIDEGMVKRIRGVTFSTRVSSQFEN 206

Query: 646  TMIHAARGVFNRLLPDVHIFQDHRSGQEAGKSPGYGISLVAETTTGCFISTDTAVCYARG 825
            TMIHAARG+FNRLLPDVHIF DH++GQ+AG SPGYGISLVAETT+GCFI+ DTAV YAR 
Sbjct: 207  TMIHAARGIFNRLLPDVHIFTDHKAGQQAGNSPGYGISLVAETTSGCFITADTAVSYARA 266

Query: 826  EXXXXXXXXERKELMPPADVGEQAASMLLGEIEQGGVVDSMHQGILFILCALCPQDVSKV 1005
            +        E++EL+P  DVGEQ AS+LL EIEQGGVVD+ HQG+LF+LCALCPQDVSK+
Sbjct: 267  D--DGGMEGEKQELVPAEDVGEQIASVLLNEIEQGGVVDTTHQGLLFLLCALCPQDVSKI 324

Query: 1006 RVGKLSPYAIETLRHI 1053
            RVGKL  + IETLR I
Sbjct: 325  RVGKLVTHGIETLRLI 340


>ref|NP_001242399.1| uncharacterized protein LOC100778883 [Glycine max]
            gi|255636967|gb|ACU18816.1| unknown [Glycine max]
          Length = 379

 Score =  478 bits (1231), Expect = e-132
 Identities = 235/335 (70%), Positives = 279/335 (83%), Gaps = 1/335 (0%)
 Frame = +1

Query: 106  PVLIDDIRHEDTWPGLRPHEISLLRLLEKITDDCLVEINETGTKLKYKPGVIVGGR-NLV 282
            P+LI+DIR ++TWPGLR HEISLLRL E + DDC VEINETGTKLKYKPG I+GGR +  
Sbjct: 28   PILIEDIRADETWPGLRNHEISLLRLFETVCDDCHVEINETGTKLKYKPGTIMGGRQHSP 87

Query: 283  HDCGLSRSIGYFLEPLLVLGVFGKKPLSIRLKGITNDSKDPSVDTFKRTTLPLLKRFGVP 462
            HDCG+SRSIGYFLEPL+VL +F K+PL+IRLKGITNDSKDPSVDTFK TTLP+LKRFGVP
Sbjct: 88   HDCGVSRSIGYFLEPLIVLCLFAKQPLTIRLKGITNDSKDPSVDTFKSTTLPILKRFGVP 147

Query: 463  SEGLDLKIESRGSPPQGGGEVLLGIPIVPNSLSAVTWIDEGMVKRIRGTAFSTKVSYQFE 642
            SEGL++K+ESRG PP GGGEVLL +P+V  SL+AV+WIDEG V++IRGT+FST+VS QFE
Sbjct: 148  SEGLEIKVESRGLPPNGGGEVLLSVPVV-QSLTAVSWIDEGFVRKIRGTSFSTRVSVQFE 206

Query: 643  KTMIHAARGVFNRLLPDVHIFQDHRSGQEAGKSPGYGISLVAETTTGCFISTDTAVCYAR 822
              MI AARG+ N L+ DVHIF DHRSG EAG SPGYGISLVAETT+GCFIS DTAV   R
Sbjct: 207  YGMIKAARGIINPLVSDVHIFSDHRSGPEAGNSPGYGISLVAETTSGCFISVDTAVSQVR 266

Query: 823  GEXXXXXXXXERKELMPPADVGEQAASMLLGEIEQGGVVDSMHQGILFILCALCPQDVSK 1002
             +         +++LM P D+G   AS LLGEI Q GVVDS HQG+LF+LCALCPQDVSK
Sbjct: 267  DDDTSGLADDAKRDLMSPDDIGVGIASALLGEIAQSGVVDSTHQGLLFLLCALCPQDVSK 326

Query: 1003 VRVGKLSPYAIETLRHIRDFLDVKFVITPDSSTET 1107
            VRVGKLS + +ETLR++RDFLD+KF+I PD ++++
Sbjct: 327  VRVGKLSQHGVETLRNLRDFLDLKFIIKPDPNSQS 361


Top