BLASTX nr result

ID: Coptis23_contig00008446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008446
         (1185 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264007.1| PREDICTED: uncharacterized protein LOC100243...   351   2e-94
ref|XP_003546825.1| PREDICTED: uncharacterized protein LOC100804...   341   2e-91
ref|XP_003532914.1| PREDICTED: uncharacterized protein LOC100795...   340   3e-91
ref|XP_002315073.1| predicted protein [Populus trichocarpa] gi|2...   340   3e-91
ref|XP_003531814.1| PREDICTED: uncharacterized protein LOC100797...   336   8e-90

>ref|XP_002264007.1| PREDICTED: uncharacterized protein LOC100243255 [Vitis vinifera]
           gi|297736123|emb|CBI24161.3| unnamed protein product
           [Vitis vinifera]
          Length = 275

 Score =  351 bits (901), Expect = 2e-94
 Identities = 184/275 (66%), Positives = 212/275 (77%), Gaps = 18/275 (6%)
 Frame = +2

Query: 92  MAFVISNLSASPLFQPN---KSSSLVQKPI---------FSFPLTKLETPPKGGLQDKGG 235
           MA+++ NLS S L   +   K +S+  KPI          S   T L       LQD   
Sbjct: 1   MAYLLPNLSPSLLISSSSKSKPNSIPTKPINFNLSSSSSSSSTSTTLTNLQSSTLQDAQV 60

Query: 236 LLSSVV----EKKDVNKQERNDFYVNLGLAVRTLREDMPFLFSKDLNYSIYRDDITFIDP 403
            L +      ++++  +Q+R+DFYVNLGLAVRTLRED+P LFSKDLNY IYRDDITF+DP
Sbjct: 61  NLQTAGAHDNQQQNQQQQQRDDFYVNLGLAVRTLREDLPLLFSKDLNYDIYRDDITFLDP 120

Query: 404 LNTFTGMEKYKLIFWALRFHGRILFRDISLEVFRIWQPSENVILIRWNLRGVPRVPWEAK 583
           LNTFTG+E YKLIFWALRFHGRILFR+ISLEVFR+WQPSENVILIRWNLRGVPRVPWEAK
Sbjct: 121 LNTFTGIENYKLIFWALRFHGRILFREISLEVFRVWQPSENVILIRWNLRGVPRVPWEAK 180

Query: 584 GQFQGTSRYKLDRNGKIYEHKVDNLAFNFPQSLRPAASVLDLVTACPTSPNPTFFWG-PA 760
           G+FQGTSRYKLDRNGKIYEHKVDNLAFNFPQ L+PAASVLDLVTACP SPNPTF WG  A
Sbjct: 181 GEFQGTSRYKLDRNGKIYEHKVDNLAFNFPQPLKPAASVLDLVTACPASPNPTFLWGSAA 240

Query: 761 DLKSSSWLLFYRAVRETLDSEAY-LPGKERLIACS 862
           D+ SSSW+ FYRAVRETLD + + L  ++ L+ CS
Sbjct: 241 DVYSSSWVEFYRAVRETLDRQEHNLLAQDGLVTCS 275


>ref|XP_003546825.1| PREDICTED: uncharacterized protein LOC100804596 [Glycine max]
          Length = 262

 Score =  341 bits (875), Expect = 2e-91
 Identities = 168/265 (63%), Positives = 201/265 (75%), Gaps = 8/265 (3%)
 Frame = +2

Query: 92  MAFVISNLSASPLFQPNKSSSLV--------QKPIFSFPLTKLETPPKGGLQDKGGLLSS 247
           MAF++ NL  S L Q   +            QKP   FP++   T     LQ       S
Sbjct: 1   MAFLLPNLQPSLLAQSKSNKDKANLHQTLSPQKPTSQFPISST-TCSSSSLQTAQAAQVS 59

Query: 248 VVEKKDVNKQERNDFYVNLGLAVRTLREDMPFLFSKDLNYSIYRDDITFIDPLNTFTGME 427
             + K   +Q +++FY+NLGLAVRT+RED+P +F KDLNY IYRDDITF+DPLNTFTG+E
Sbjct: 60  TPQDKQ-QQQPKDEFYLNLGLAVRTIREDLPLVFVKDLNYDIYRDDITFMDPLNTFTGIE 118

Query: 428 KYKLIFWALRFHGRILFRDISLEVFRIWQPSENVILIRWNLRGVPRVPWEAKGQFQGTSR 607
           KYKL+FWALRFHG+ILFR+I+L+V+R+WQPSENVIL+RWNLRGVPRVPWEAKG+FQGTSR
Sbjct: 119 KYKLVFWALRFHGKILFREIALDVYRVWQPSENVILVRWNLRGVPRVPWEAKGEFQGTSR 178

Query: 608 YKLDRNGKIYEHKVDNLAFNFPQSLRPAASVLDLVTACPTSPNPTFFWGPADLKSSSWLL 787
           YKLDRNGKIYEHKVDNLAFNFPQ+++P  SVLDLVTACP SPNPTF WGP D  SSSW+ 
Sbjct: 179 YKLDRNGKIYEHKVDNLAFNFPQNIKP-VSVLDLVTACPASPNPTFLWGPVDAYSSSWIA 237

Query: 788 FYRAVRETLDSEAYLPGKERLIACS 862
           FY+AVR+TLD E  L  ++ L  CS
Sbjct: 238 FYKAVRDTLDQERSLLPQDGLATCS 262


>ref|XP_003532914.1| PREDICTED: uncharacterized protein LOC100795419 [Glycine max]
          Length = 263

 Score =  340 bits (873), Expect = 3e-91
 Identities = 167/266 (62%), Positives = 201/266 (75%), Gaps = 9/266 (3%)
 Frame = +2

Query: 92  MAFVISNLSASPLFQPNKSSSLV--------QKPIFSFPLTKLETPPKGGLQDKGGLLSS 247
           MAF++ N+  S L Q                QKP   FP++   T     LQ     ++ 
Sbjct: 1   MAFLLPNVQPSLLAQSKSKKDKANLHQTLSPQKPTSQFPISS--TTCSSSLQTSTAQVAK 58

Query: 248 VVEKKDVNKQE-RNDFYVNLGLAVRTLREDMPFLFSKDLNYSIYRDDITFIDPLNTFTGM 424
           V    D  +Q+ +++FY+NLGL VRT+RED+P +F KDLNY IYRDDITF+DPLNTFTG+
Sbjct: 59  VSTPHDKQQQQPKDEFYLNLGLDVRTIREDLPLIFIKDLNYDIYRDDITFMDPLNTFTGI 118

Query: 425 EKYKLIFWALRFHGRILFRDISLEVFRIWQPSENVILIRWNLRGVPRVPWEAKGQFQGTS 604
           EKYKLIFWALRFHG+ILFR+I+L+V+R+WQPSENVIL+RWNLRGVPRVPWEAKG+FQGTS
Sbjct: 119 EKYKLIFWALRFHGKILFREIALDVYRVWQPSENVILVRWNLRGVPRVPWEAKGEFQGTS 178

Query: 605 RYKLDRNGKIYEHKVDNLAFNFPQSLRPAASVLDLVTACPTSPNPTFFWGPADLKSSSWL 784
           RYKLDRNGKIYEHKVDNLAFNFPQ+++P  SVLDLVTACP SPNPTF WGP D  SSSW+
Sbjct: 179 RYKLDRNGKIYEHKVDNLAFNFPQNIKP-VSVLDLVTACPASPNPTFLWGPVDAYSSSWI 237

Query: 785 LFYRAVRETLDSEAYLPGKERLIACS 862
            FY+A+RETLD E  L  ++ L  CS
Sbjct: 238 TFYKAIRETLDQERSLLPQDGLATCS 263


>ref|XP_002315073.1| predicted protein [Populus trichocarpa] gi|222864113|gb|EEF01244.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score =  340 bits (873), Expect = 3e-91
 Identities = 163/214 (76%), Positives = 184/214 (85%)
 Frame = +2

Query: 182 PLTKLETPPKGGLQDKGGLLSSVVEKKDVNKQERNDFYVNLGLAVRTLREDMPFLFSKDL 361
           P  +++TPP  G QDK              + +R++FYVNLGLAVRTLRED+P LF++DL
Sbjct: 3   PPLQVKTPP--GAQDK-------------EQHQRDEFYVNLGLAVRTLREDLPVLFTEDL 47

Query: 362 NYSIYRDDITFIDPLNTFTGMEKYKLIFWALRFHGRILFRDISLEVFRIWQPSENVILIR 541
           NY IYRDDITFIDPLNTFTG++ YKLIFWALRFHG++LFR+ISLEV+RIWQPSENVILIR
Sbjct: 48  NYDIYRDDITFIDPLNTFTGIDNYKLIFWALRFHGKMLFREISLEVYRIWQPSENVILIR 107

Query: 542 WNLRGVPRVPWEAKGQFQGTSRYKLDRNGKIYEHKVDNLAFNFPQSLRPAASVLDLVTAC 721
           WNL+GVPRVPWEAKG+FQGTSRYKLDRNGKIYEHKVDNLAFNFPQ L+PAASVLDLV AC
Sbjct: 108 WNLKGVPRVPWEAKGEFQGTSRYKLDRNGKIYEHKVDNLAFNFPQQLKPAASVLDLVAAC 167

Query: 722 PTSPNPTFFWGPADLKSSSWLLFYRAVRETLDSE 823
           P SPNPTF WGPAD+ SSSW+ FYRAVRETLD E
Sbjct: 168 PASPNPTFLWGPADVYSSSWVEFYRAVRETLDRE 201


>ref|XP_003531814.1| PREDICTED: uncharacterized protein LOC100797159 [Glycine max]
          Length = 268

 Score =  336 bits (861), Expect = 8e-90
 Identities = 173/270 (64%), Positives = 203/270 (75%), Gaps = 13/270 (4%)
 Frame = +2

Query: 92  MAFVISNLSASPLFQPNKSSSLVQKPIFSFPLTKLETP---------PKGGLQDKGGLLS 244
           MAF++SNL  S L Q  KS  + Q P  S      ++P         P   LQ     ++
Sbjct: 1   MAFLLSNLKPSLLPQ-TKSKPIPQTPSPSSAKPTSQSPSLFFFTSSAPLSALQSSTAQVA 59

Query: 245 S----VVEKKDVNKQERNDFYVNLGLAVRTLREDMPFLFSKDLNYSIYRDDITFIDPLNT 412
                    +D  +Q++++FY+NLGLAVRTLREDMPF+F KDLNY IYRDDITF DPLNT
Sbjct: 60  QGHTPTTGARDELQQQKDEFYLNLGLAVRTLREDMPFIFVKDLNYDIYRDDITFKDPLNT 119

Query: 413 FTGMEKYKLIFWALRFHGRILFRDISLEVFRIWQPSENVILIRWNLRGVPRVPWEAKGQF 592
           FTG+EKYKLIFWALRFHG+ILFR+I+L+V+RIWQPSENVILIRWNLRGVPRVPWEAKG+F
Sbjct: 120 FTGIEKYKLIFWALRFHGKILFREIALDVYRIWQPSENVILIRWNLRGVPRVPWEAKGEF 179

Query: 593 QGTSRYKLDRNGKIYEHKVDNLAFNFPQSLRPAASVLDLVTACPTSPNPTFFWGPADLKS 772
           QGTSRYKLDRNGKIYEHKVDNLAFNFPQ+L+P  SVLDLVTACP SPN TF WGP D  S
Sbjct: 180 QGTSRYKLDRNGKIYEHKVDNLAFNFPQTLKP-VSVLDLVTACPASPNLTFSWGPLDSNS 238

Query: 773 SSWLLFYRAVRETLDSEAYLPGKERLIACS 862
           SSWL FY AV++T+D E  L  ++ +  CS
Sbjct: 239 SSWLEFYHAVKDTVDQEERLLPQDCMATCS 268


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