BLASTX nr result

ID: Coptis23_contig00008444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008444
         (1239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517962.1| Peroxisomal membrane protein, putative [Rici...   434   e-119
emb|CBI20352.3| unnamed protein product [Vitis vinifera]              432   e-119
ref|XP_002284644.1| PREDICTED: uncharacterized protein LOC100253...   432   e-119
gb|ABK96261.1| unknown [Populus trichocarpa x Populus deltoides]      427   e-117
ref|XP_002329153.1| predicted protein [Populus trichocarpa] gi|2...   426   e-117

>ref|XP_002517962.1| Peroxisomal membrane protein, putative [Ricinus communis]
           gi|223542944|gb|EEF44480.1| Peroxisomal membrane
           protein, putative [Ricinus communis]
          Length = 344

 Score =  434 bits (1115), Expect = e-119
 Identities = 198/234 (84%), Positives = 216/234 (92%)
 Frame = +3

Query: 159 LVNRTINASIVLAAGTFAITRLLSIDHDYWHGWTFFEILRYVPEHNWIAYEEALKSNPVL 338
           L+ R INASIVL  GT A+++LL+IDHDYWHGWT +E+LRYVPEHNWIAYE+ALKSNPVL
Sbjct: 101 LMTRAINASIVLGFGTLAVSKLLTIDHDYWHGWTLYEVLRYVPEHNWIAYEQALKSNPVL 160

Query: 339 AKMVISGVVYSLGDWIAQCYEGKPLFEFDRTRAFRSGLVGFFLHGSLSHYYYQICEALIP 518
            KM ISG+VYS+GDWIAQCYEGKP+FEFDRTR FRSGLVGF LHGSLSHYYYQ CEAL P
Sbjct: 161 TKMAISGIVYSIGDWIAQCYEGKPIFEFDRTRMFRSGLVGFTLHGSLSHYYYQFCEALFP 220

Query: 519 FDDWWVVPAKVAFDQTVWAALWNSIYFVALGFLRFESPANIFGELKSTFLPMLTAGWKLW 698
           F+DWWVVPAKVAFDQTVWAA+WNSIYF+ LGFLRFESPANIF EL +TF PMLTAGWKLW
Sbjct: 221 FEDWWVVPAKVAFDQTVWAAIWNSIYFLVLGFLRFESPANIFSELTATFWPMLTAGWKLW 280

Query: 699 PFAHLITYGVIPLEQRLLWVDCVELIWVTILSTYSNEKSEARTSEASIETDSKS 860
           PF+HLITYGVIP+EQRLLWVDCVELIWVTILSTYSNEKSEARTSEA+IE  SKS
Sbjct: 281 PFSHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARTSEATIEATSKS 334


>emb|CBI20352.3| unnamed protein product [Vitis vinifera]
          Length = 262

 Score =  432 bits (1112), Expect = e-119
 Identities = 199/241 (82%), Positives = 218/241 (90%)
 Frame = +3

Query: 159 LVNRTINASIVLAAGTFAITRLLSIDHDYWHGWTFFEILRYVPEHNWIAYEEALKSNPVL 338
           L++R+INA+IVLAAG+FA+T+LL+ID DYWHGWT FEILRY P+HNW AYEEALK+NPV 
Sbjct: 21  LIDRSINATIVLAAGSFAVTKLLTIDADYWHGWTIFEILRYAPQHNWSAYEEALKTNPVF 80

Query: 339 AKMVISGVVYSLGDWIAQCYEGKPLFEFDRTRAFRSGLVGFFLHGSLSHYYYQICEALIP 518
           AKMVISGVVYSLGDWIAQCYEGKPLFEFDR R  RSGLVGF LHGSLSHYYYQ CEAL P
Sbjct: 81  AKMVISGVVYSLGDWIAQCYEGKPLFEFDRARMLRSGLVGFTLHGSLSHYYYQFCEALFP 140

Query: 519 FDDWWVVPAKVAFDQTVWAALWNSIYFVALGFLRFESPANIFGELKSTFLPMLTAGWKLW 698
           F DWWVVPAKVAFDQT+WAA+WNSIY+  +GFLRF+SPAN+FGEL++TF PMLTAGWKLW
Sbjct: 141 FQDWWVVPAKVAFDQTLWAAVWNSIYYTVVGFLRFDSPANVFGELRATFWPMLTAGWKLW 200

Query: 699 PFAHLITYGVIPLEQRLLWVDCVELIWVTILSTYSNEKSEARTSEASIETDSKSP*VSSP 878
           PFAHLITYGVIP+EQRLLWVDCVELIWVTILSTYSNEKSEAR SEAS E  S SP   SP
Sbjct: 201 PFAHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARVSEASAEAASNSPPTGSP 260

Query: 879 E 881
           E
Sbjct: 261 E 261


>ref|XP_002284644.1| PREDICTED: uncharacterized protein LOC100253839 [Vitis vinifera]
          Length = 371

 Score =  432 bits (1112), Expect = e-119
 Identities = 199/241 (82%), Positives = 218/241 (90%)
 Frame = +3

Query: 159 LVNRTINASIVLAAGTFAITRLLSIDHDYWHGWTFFEILRYVPEHNWIAYEEALKSNPVL 338
           L++R+INA+IVLAAG+FA+T+LL+ID DYWHGWT FEILRY P+HNW AYEEALK+NPV 
Sbjct: 130 LIDRSINATIVLAAGSFAVTKLLTIDADYWHGWTIFEILRYAPQHNWSAYEEALKTNPVF 189

Query: 339 AKMVISGVVYSLGDWIAQCYEGKPLFEFDRTRAFRSGLVGFFLHGSLSHYYYQICEALIP 518
           AKMVISGVVYSLGDWIAQCYEGKPLFEFDR R  RSGLVGF LHGSLSHYYYQ CEAL P
Sbjct: 190 AKMVISGVVYSLGDWIAQCYEGKPLFEFDRARMLRSGLVGFTLHGSLSHYYYQFCEALFP 249

Query: 519 FDDWWVVPAKVAFDQTVWAALWNSIYFVALGFLRFESPANIFGELKSTFLPMLTAGWKLW 698
           F DWWVVPAKVAFDQT+WAA+WNSIY+  +GFLRF+SPAN+FGEL++TF PMLTAGWKLW
Sbjct: 250 FQDWWVVPAKVAFDQTLWAAVWNSIYYTVVGFLRFDSPANVFGELRATFWPMLTAGWKLW 309

Query: 699 PFAHLITYGVIPLEQRLLWVDCVELIWVTILSTYSNEKSEARTSEASIETDSKSP*VSSP 878
           PFAHLITYGVIP+EQRLLWVDCVELIWVTILSTYSNEKSEAR SEAS E  S SP   SP
Sbjct: 310 PFAHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARVSEASAEAASNSPPTGSP 369

Query: 879 E 881
           E
Sbjct: 370 E 370


>gb|ABK96261.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 369

 Score =  427 bits (1098), Expect = e-117
 Identities = 200/241 (82%), Positives = 217/241 (90%)
 Frame = +3

Query: 159 LVNRTINASIVLAAGTFAITRLLSIDHDYWHGWTFFEILRYVPEHNWIAYEEALKSNPVL 338
           L++RTINA IVL AGT+AIT+LL+IDH+YWHGWT FEILRY P+HNW AYEEALK+NPVL
Sbjct: 129 LIDRTINAMIVLGAGTYAITKLLTIDHNYWHGWTLFEILRYAPQHNWSAYEEALKTNPVL 188

Query: 339 AKMVISGVVYSLGDWIAQCYEGKPLFEFDRTRAFRSGLVGFFLHGSLSHYYYQICEALIP 518
           AKM+ISG+VYSLGDWIAQCYEGKPLFE+DRTR FRSGLVGF LHGSLSHYYYQ CE L P
Sbjct: 189 AKMMISGIVYSLGDWIAQCYEGKPLFEYDRTRMFRSGLVGFTLHGSLSHYYYQFCEELFP 248

Query: 519 FDDWWVVPAKVAFDQTVWAALWNSIYFVALGFLRFESPANIFGELKSTFLPMLTAGWKLW 698
           F DWWVVPAKVAFDQT+WAA WNSIYF ALGFLR ESPA+IF EL +TF PMLTAGWKLW
Sbjct: 249 FQDWWVVPAKVAFDQTLWAAAWNSIYFTALGFLRLESPASIFSELTATFWPMLTAGWKLW 308

Query: 699 PFAHLITYGVIPLEQRLLWVDCVELIWVTILSTYSNEKSEARTSEASIETDSKSP*VSSP 878
           PFAHLITYGVIP+EQRLLWVDCVELIWVTILSTYSNEKSEAR SEA++E  S S   SSP
Sbjct: 309 PFAHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARISEAAVEASSSSL-PSSP 367

Query: 879 E 881
           E
Sbjct: 368 E 368


>ref|XP_002329153.1| predicted protein [Populus trichocarpa] gi|222869822|gb|EEF06953.1|
           predicted protein [Populus trichocarpa]
          Length = 238

 Score =  426 bits (1095), Expect = e-117
 Identities = 196/234 (83%), Positives = 213/234 (91%)
 Frame = +3

Query: 159 LVNRTINASIVLAAGTFAITRLLSIDHDYWHGWTFFEILRYVPEHNWIAYEEALKSNPVL 338
           L++RTINA IVL AGT+AIT+LL+IDH+YWHGWT FEILRY P+HNW AYEEALK+NPVL
Sbjct: 5   LIDRTINAMIVLGAGTYAITKLLTIDHNYWHGWTLFEILRYAPQHNWSAYEEALKTNPVL 64

Query: 339 AKMVISGVVYSLGDWIAQCYEGKPLFEFDRTRAFRSGLVGFFLHGSLSHYYYQICEALIP 518
           AKM+ISG+VYSLGDWIAQCYEGKPLFE+DRTR FRSGLVGF LHGSLSHYYYQ CE L P
Sbjct: 65  AKMMISGIVYSLGDWIAQCYEGKPLFEYDRTRMFRSGLVGFTLHGSLSHYYYQFCEELFP 124

Query: 519 FDDWWVVPAKVAFDQTVWAALWNSIYFVALGFLRFESPANIFGELKSTFLPMLTAGWKLW 698
           F DWWVVPAKVAFDQT+WAA WNSIYF ALGFLR ESPA+IF EL +TF PMLTAGWKLW
Sbjct: 125 FQDWWVVPAKVAFDQTLWAAAWNSIYFTALGFLRLESPASIFSELTATFWPMLTAGWKLW 184

Query: 699 PFAHLITYGVIPLEQRLLWVDCVELIWVTILSTYSNEKSEARTSEASIETDSKS 860
           PFAHLITYGVIP+EQRLLWVDCVELIWVTILSTYSNEKSEAR SEA++E  S S
Sbjct: 185 PFAHLITYGVIPVEQRLLWVDCVELIWVTILSTYSNEKSEARISEAAVEASSSS 238


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