BLASTX nr result

ID: Coptis23_contig00008441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008441
         (885 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGC39093.1| remorin-2 protein [Dimocarpus longan]                  294   2e-77
gb|AFB69340.1| remorin-4b, partial [Dimocarpus longan]                294   2e-77
emb|CBI35798.3| unnamed protein product [Vitis vinifera]              291   1e-76
ref|XP_002271218.1| PREDICTED: uncharacterized protein LOC100260...   291   1e-76
ref|XP_002532949.1| DNA binding protein, putative [Ricinus commu...   285   1e-74

>gb|AGC39093.1| remorin-2 protein [Dimocarpus longan]
          Length = 366

 Score =  294 bits (753), Expect = 2e-77
 Identities = 155/226 (68%), Positives = 176/226 (77%), Gaps = 8/226 (3%)
 Frame = -3

Query: 883 EVQHRDIGTEMTPLPSSTTSRCNTPIKISSPARHNTPADRSGPLV--PFNRT--TISATE 716
           EV H+D+GTEMTPL SST SRC+TP K SSPARHNTPA+RSGPL     N T  TI  ++
Sbjct: 142 EVLHKDVGTEMTPLGSSTVSRCHTPFKSSSPARHNTPANRSGPLAIGHLNSTNNTIDISQ 201

Query: 715 LQECHFAKLELGTQFDSVVSNWSSRXXXXXEISKSLRHFEPSDGCRKNVVDTRVCAWEEE 536
           LQECH AKL+ GTQ+DSV +NWSSR     +ISKSLRHFE  +  RK+V D+R  AWEEE
Sbjct: 202 LQECHLAKLQRGTQYDSVTTNWSSREEEEEDISKSLRHFETGN-VRKSVSDSRAVAWEEE 260

Query: 535 ERTKSCIRYQREEARIQAWVNLQSAKAEAQSRKLEVKIQKMRSNLEEKLMKRMSIVHRKA 356
           E+TK C+RYQREEA+IQAWVNLQSAKAEAQSRKLEVKIQKMRSNLEEKLMKRM+IVHRKA
Sbjct: 261 EKTKCCLRYQREEAKIQAWVNLQSAKAEAQSRKLEVKIQKMRSNLEEKLMKRMAIVHRKA 320

Query: 355 EEWMTAAXXXXXXXXQRATEQAHKLKSKHNS----FNSCSCFPGNN 230
           EEW  AA        Q ATEQAHK+ ++HNS     +SC CFP NN
Sbjct: 321 EEWRAAAQQQHAEQTQSATEQAHKIVNRHNSHVTGHSSCGCFPCNN 366


>gb|AFB69340.1| remorin-4b, partial [Dimocarpus longan]
          Length = 225

 Score =  294 bits (753), Expect = 2e-77
 Identities = 155/226 (68%), Positives = 176/226 (77%), Gaps = 8/226 (3%)
 Frame = -3

Query: 883 EVQHRDIGTEMTPLPSSTTSRCNTPIKISSPARHNTPADRSGPLV--PFNRT--TISATE 716
           EV H+D+GTEMTPL SST SRC+TP K SSPARHNTPA+RSGPL     N T  TI  ++
Sbjct: 1   EVLHKDVGTEMTPLGSSTVSRCHTPFKSSSPARHNTPANRSGPLAIGHLNSTNNTIDISQ 60

Query: 715 LQECHFAKLELGTQFDSVVSNWSSRXXXXXEISKSLRHFEPSDGCRKNVVDTRVCAWEEE 536
           LQECH AKL+ GTQ+DSV +NWSSR     +ISKSLRHFE  +  RK+V D+R  AWEEE
Sbjct: 61  LQECHLAKLQRGTQYDSVTTNWSSREEEEEDISKSLRHFETGN-VRKSVSDSRAVAWEEE 119

Query: 535 ERTKSCIRYQREEARIQAWVNLQSAKAEAQSRKLEVKIQKMRSNLEEKLMKRMSIVHRKA 356
           E+TK C+RYQREEA+IQAWVNLQSAKAEAQSRKLEVKIQKMRSNLEEKLMKRM+IVHRKA
Sbjct: 120 EKTKCCLRYQREEAKIQAWVNLQSAKAEAQSRKLEVKIQKMRSNLEEKLMKRMAIVHRKA 179

Query: 355 EEWMTAAXXXXXXXXQRATEQAHKLKSKHNS----FNSCSCFPGNN 230
           EEW  AA        Q ATEQAHK+ ++HNS     +SC CFP NN
Sbjct: 180 EEWRAAAQQQHAEQTQSATEQAHKIVNRHNSHVTGHSSCGCFPCNN 225


>emb|CBI35798.3| unnamed protein product [Vitis vinifera]
          Length = 456

 Score =  291 bits (746), Expect = 1e-76
 Identities = 149/226 (65%), Positives = 174/226 (76%), Gaps = 8/226 (3%)
 Frame = -3

Query: 883 EVQHRDIGTEMTPLPSSTTSRCNTPIKISSPARHNTPADRSGPLV----PFNRTTISATE 716
           EV HRDIGTEMTP+ SST SRC+TPIK SSPARHNTPA+RSGPL         TTI  ++
Sbjct: 228 EVHHRDIGTEMTPIGSSTVSRCHTPIKSSSPARHNTPANRSGPLALGSSNSTNTTIDISQ 287

Query: 715 LQECHFAKLELGTQFDSVVSNWSSRXXXXXEISKSLRHFEPSDGCRKNVVDTRVCAWEEE 536
           LQECH AKL+LG+QFDSV S+WSSR     E+SKSLRH E  + CRK++ + +  +WEEE
Sbjct: 288 LQECHLAKLQLGSQFDSVGSHWSSREEEEEEVSKSLRHSETGNFCRKSISEAKSASWEEE 347

Query: 535 ERTKSCIRYQREEARIQAWVNLQSAKAEAQSRKLEVKIQKMRSNLEEKLMKRMSIVHRKA 356
           E+TK C+RYQREEA+IQAWVNLQ AKAEAQSRKLEVKIQKMRSNLEEKLMKRM++VHRKA
Sbjct: 348 EKTKCCLRYQREEAKIQAWVNLQKAKAEAQSRKLEVKIQKMRSNLEEKLMKRMAVVHRKA 407

Query: 355 EEWMTAAXXXXXXXXQRATEQAHKLKSKHNS----FNSCSCFPGNN 230
           EEW  +A        QRA EQA K+ ++HNS     +SC CFP NN
Sbjct: 408 EEWRASAQVQHSEQIQRAAEQAQKMLNQHNSNFSAHSSCGCFPCNN 453


>ref|XP_002271218.1| PREDICTED: uncharacterized protein LOC100260045 [Vitis vinifera]
          Length = 481

 Score =  291 bits (746), Expect = 1e-76
 Identities = 149/226 (65%), Positives = 174/226 (76%), Gaps = 8/226 (3%)
 Frame = -3

Query: 883 EVQHRDIGTEMTPLPSSTTSRCNTPIKISSPARHNTPADRSGPLV----PFNRTTISATE 716
           EV HRDIGTEMTP+ SST SRC+TPIK SSPARHNTPA+RSGPL         TTI  ++
Sbjct: 253 EVHHRDIGTEMTPIGSSTVSRCHTPIKSSSPARHNTPANRSGPLALGSSNSTNTTIDISQ 312

Query: 715 LQECHFAKLELGTQFDSVVSNWSSRXXXXXEISKSLRHFEPSDGCRKNVVDTRVCAWEEE 536
           LQECH AKL+LG+QFDSV S+WSSR     E+SKSLRH E  + CRK++ + +  +WEEE
Sbjct: 313 LQECHLAKLQLGSQFDSVGSHWSSREEEEEEVSKSLRHSETGNFCRKSISEAKSASWEEE 372

Query: 535 ERTKSCIRYQREEARIQAWVNLQSAKAEAQSRKLEVKIQKMRSNLEEKLMKRMSIVHRKA 356
           E+TK C+RYQREEA+IQAWVNLQ AKAEAQSRKLEVKIQKMRSNLEEKLMKRM++VHRKA
Sbjct: 373 EKTKCCLRYQREEAKIQAWVNLQKAKAEAQSRKLEVKIQKMRSNLEEKLMKRMAVVHRKA 432

Query: 355 EEWMTAAXXXXXXXXQRATEQAHKLKSKHNS----FNSCSCFPGNN 230
           EEW  +A        QRA EQA K+ ++HNS     +SC CFP NN
Sbjct: 433 EEWRASAQVQHSEQIQRAAEQAQKMLNQHNSNFSAHSSCGCFPCNN 478


>ref|XP_002532949.1| DNA binding protein, putative [Ricinus communis]
           gi|223527278|gb|EEF29433.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 487

 Score =  285 bits (728), Expect = 1e-74
 Identities = 146/226 (64%), Positives = 173/226 (76%), Gaps = 9/226 (3%)
 Frame = -3

Query: 883 EVQHRDIGTEMTPLPSSTTSRCNTPIKISSPARHNTPADRSGPLVPFN----RTTISATE 716
           EV+HRD+GT+MTPL SSTTSRC+TP K SSPARHNTPA+RSGPL   N     +TI   +
Sbjct: 255 EVKHRDVGTDMTPLGSSTTSRCHTPFKSSSPARHNTPANRSGPLPLGNSSSSNSTIDIAQ 314

Query: 715 LQECHFAKLELGTQFDSVVSNWSSRXXXXXEISKSLRHFEPSDGCRKNVVDTRVCAWEEE 536
           LQECH AKL+LG+Q+DSV SNWSSR     +ISKSLRHFE    CR++V D+R  AWEEE
Sbjct: 315 LQECHLAKLQLGSQYDSVTSNWSSREEEEEDISKSLRHFETGIICRRSVSDSRAAAWEEE 374

Query: 535 ERTKSCIRYQREEARIQAWVNLQSAKAEAQSRKLEVKIQKMRSNLEEKLMKRMSIVHRKA 356
           E+TK C+RYQREEA+IQAW+NLQ+AKAEAQS+KLEVKIQKMRSNLEEKLMKRM+ V RKA
Sbjct: 375 EKTKCCLRYQREEAKIQAWLNLQTAKAEAQSKKLEVKIQKMRSNLEEKLMKRMANVQRKA 434

Query: 355 EEWMTAAXXXXXXXXQRATEQAHKLKSKHN-----SFNSCSCFPGN 233
           E+W  AA        QRA+E + K+ ++HN     S  SC CFP N
Sbjct: 435 EDWRAAARQQHTDQIQRASELSKKMMNRHNNLQFSSHTSCGCFPCN 480


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