BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008421
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]           256   2e-66
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]   240   1e-61
emb|CAN65406.1| hypothetical protein VITISV_030853 [Vitis vinifera]   239   2e-61
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   237   6e-61
emb|CAN67644.1| hypothetical protein VITISV_028829 [Vitis vinifera]   234   7e-60

>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score =  256 bits (653), Expect = 2e-66
 Identities = 121/158 (76%), Positives = 136/158 (86%)
 Frame = +1

Query: 1    GTSKSCLCFGGSKPLLEGYTDADMAGDVDSMKSTSGYLVTFAGGAVSWQSKLQKCVALST 180
            GTSK CLCFG   P+L GYTDADMAGDVDS KSTSGYL+ F+GGAVSWQSKLQKCVALST
Sbjct: 1161 GTSKLCLCFGEDNPVLVGYTDADMAGDVDSRKSTSGYLINFSGGAVSWQSKLQKCVALST 1220

Query: 181  TEAEYIAATECCKELLWMKRFFDELGLKQKQFVVLCDSQSAIHLSKNPSFHSRSKHIHVR 360
            TEAE+IAATE CKEL+WMK+F  ELG  Q  + + CDSQSAIHL+KN SFHSRSKHI VR
Sbjct: 1221 TEAEFIAATEACKELIWMKKFLTELGFSQDGYQLFCDSQSAIHLAKNASFHSRSKHIDVR 1280

Query: 361  YHWIREVLEDKHLCIEKIHTDKNGSDMMTKVLPKGKFD 474
            Y+WIR+VLE K L +EKIHTD+NGSDM+TK LPKGKF+
Sbjct: 1281 YNWIRDVLEKKMLRLEKIHTDENGSDMLTKTLPKGKFE 1318


>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
          Length = 1362

 Score =  240 bits (612), Expect = 1e-61
 Identities = 114/156 (73%), Positives = 131/156 (83%)
 Frame = +1

Query: 1    GTSKSCLCFGGSKPLLEGYTDADMAGDVDSMKSTSGYLVTFAGGAVSWQSKLQKCVALST 180
            GTSK  L FG  KP+L GYTD+DMAGDVD+ KSTSGYL+TF+GGAVSWQS+LQKCVALST
Sbjct: 1131 GTSKLKLTFGSGKPILVGYTDSDMAGDVDNRKSTSGYLMTFSGGAVSWQSRLQKCVALST 1190

Query: 181  TEAEYIAATECCKELLWMKRFFDELGLKQKQFVVLCDSQSAIHLSKNPSFHSRSKHIHVR 360
            TEAEYIAA E CKELLWMK F  ELG KQ+++VV CD+QSAIHLSKN ++H+RSKHI VR
Sbjct: 1191 TEAEYIAAVEACKELLWMKCFMQELGFKQQRYVVYCDNQSAIHLSKNSTYHARSKHIDVR 1250

Query: 361  YHWIREVLEDKHLCIEKIHTDKNGSDMMTKVLPKGK 468
            YHW+R+ L D    IEKIHTD NGSDM+TK LP+ K
Sbjct: 1251 YHWMRDALNDNLFEIEKIHTDNNGSDMLTKTLPREK 1286


>emb|CAN65406.1| hypothetical protein VITISV_030853 [Vitis vinifera]
          Length = 1017

 Score =  239 bits (610), Expect = 2e-61
 Identities = 113/156 (72%), Positives = 132/156 (84%)
 Frame = +1

Query: 1    GTSKSCLCFGGSKPLLEGYTDADMAGDVDSMKSTSGYLVTFAGGAVSWQSKLQKCVALST 180
            GTSK  L FGG KP+L GYTD+DMAGDVD+ +STSGYL+T +GGAVSWQS+LQKCVALST
Sbjct: 790  GTSKLKLTFGGGKPILVGYTDSDMAGDVDNRRSTSGYLMTCSGGAVSWQSRLQKCVALST 849

Query: 181  TEAEYIAATECCKELLWMKRFFDELGLKQKQFVVLCDSQSAIHLSKNPSFHSRSKHIHVR 360
            TEAEYIAA E CKELLWMK F  ELG KQ+++VV CD+QS IHLSKN ++H+RSKHIHVR
Sbjct: 850  TEAEYIAAAEACKELLWMKCFMQELGFKQQRYVVYCDNQSPIHLSKNSTYHARSKHIHVR 909

Query: 361  YHWIREVLEDKHLCIEKIHTDKNGSDMMTKVLPKGK 468
            YHW+R+ L D  L IEKIHT+ NGSDM+TK LP+ K
Sbjct: 910  YHWMRDALNDNLLEIEKIHTNNNGSDMLTKTLPREK 945


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
            protein product [Nicotiana tabacum]
          Length = 1328

 Score =  237 bits (605), Expect = 6e-61
 Identities = 108/158 (68%), Positives = 137/158 (86%)
 Frame = +1

Query: 1    GTSKSCLCFGGSKPLLEGYTDADMAGDVDSMKSTSGYLVTFAGGAVSWQSKLQKCVALST 180
            GT+  CLCFGGS P+L+GYTDADMAGD+D+ KS++GYL TF+GGA+SWQSKLQKCVALST
Sbjct: 1160 GTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALST 1219

Query: 181  TEAEYIAATECCKELLWMKRFFDELGLKQKQFVVLCDSQSAIHLSKNPSFHSRSKHIHVR 360
            TEAEYIAATE  KE++W+KRF  ELGL QK++VV CDSQSAI LSKN  +H+R+KHI VR
Sbjct: 1220 TEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVR 1279

Query: 361  YHWIREVLEDKHLCIEKIHTDKNGSDMMTKVLPKGKFD 474
            YHWIRE+++D+ L + KI T++N +DM+TKV+P+ KF+
Sbjct: 1280 YHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFE 1317


>emb|CAN67644.1| hypothetical protein VITISV_028829 [Vitis vinifera]
          Length = 831

 Score =  234 bits (596), Expect = 7e-60
 Identities = 107/155 (69%), Positives = 130/155 (83%)
 Frame = +1

Query: 4    TSKSCLCFGGSKPLLEGYTDADMAGDVDSMKSTSGYLVTFAGGAVSWQSKLQKCVALSTT 183
            TSK+CLCFG  KP+L G TD DM GDVDS KS S YL++F+GGAVSWQS+LQKCVALSTT
Sbjct: 662  TSKTCLCFGTDKPVLVGCTDTDMVGDVDSRKSISSYLISFSGGAVSWQSRLQKCVALSTT 721

Query: 184  EAEYIAATECCKELLWMKRFFDELGLKQKQFVVLCDSQSAIHLSKNPSFHSRSKHIHVRY 363
            +AEYIA TE   ELLWMK+F  +LGL+Q+++++ CDSQ+ IHL+KNP+FHSRSKHI+VRY
Sbjct: 722  KAEYIAITEASNELLWMKKFLQKLGLQQERYLLYCDSQNVIHLNKNPTFHSRSKHIYVRY 781

Query: 364  HWIREVLEDKHLCIEKIHTDKNGSDMMTKVLPKGK 468
            HW R+ LE K  C+EKIHTD+NGSDMMTK +P  K
Sbjct: 782  HWTRDALEMKLFCLEKIHTDENGSDMMTKPIPTEK 816