BLASTX nr result
ID: Coptis23_contig00008401
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00008401
(1845 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277245.1| PREDICTED: translation factor GUF1 homolog, ... 828 0.0
ref|XP_002517483.1| GTP-binding protein lepA, putative [Ricinus ... 802 0.0
ref|XP_004162590.1| PREDICTED: LOW QUALITY PROTEIN: translation ... 786 0.0
ref|XP_004148706.1| PREDICTED: translation factor GUF1 homolog, ... 786 0.0
ref|XP_003533605.1| PREDICTED: translation factor GUF1 homolog, ... 781 0.0
>ref|XP_002277245.1| PREDICTED: translation factor GUF1 homolog, mitochondrial [Vitis
vinifera]
Length = 681
Score = 828 bits (2139), Expect = 0.0
Identities = 416/490 (84%), Positives = 440/490 (89%), Gaps = 1/490 (0%)
Frame = -3
Query: 1468 GWIDMVCIHPRTNRKENNVDLSLYPTDRIRNFSIIAHVDHGKSTLADRLLELTGTIKRGL 1289
GW C N ++++VDLS YP +RIRNFSIIAHVDHGKSTLADRLLELTGTIKRG
Sbjct: 50 GWSHTFCSRSLQNSRDSSVDLSQYPPERIRNFSIIAHVDHGKSTLADRLLELTGTIKRGH 109
Query: 1288 GQPQYLDKLQVERERGITVKAQTATMFHSHNY-GSDISDTGDPPSFLLNLIDTPGHVDFS 1112
GQPQYLDKLQVERERGITVKAQTATMFH HN+ G D++ + PSFLLNLIDTPGHVDFS
Sbjct: 110 GQPQYLDKLQVERERGITVKAQTATMFHRHNFDGPDVTIAQESPSFLLNLIDTPGHVDFS 169
Query: 1111 YEVSRSLAACQGALLVVDAAQGVQAQTVANFYLAFESNLTIIPIINKIDQPTADPDRIKA 932
YEVSRSLAACQG LLVVDAAQGVQAQTVANFYLAFESNLTIIP+INKIDQPTADPD +KA
Sbjct: 170 YEVSRSLAACQGVLLVVDAAQGVQAQTVANFYLAFESNLTIIPVINKIDQPTADPDHVKA 229
Query: 931 QLKSMFDLDPEDALLTSAKTGQGLEHVLPAVIERIPPPPGKSSLPLRMLLLDSYYDEYKG 752
QLKSMFDL+P DALLTSAKTGQGLE VLPAVIERIPPPPGKS PLRMLLLDSYYDEYKG
Sbjct: 230 QLKSMFDLNPSDALLTSAKTGQGLEQVLPAVIERIPPPPGKSCSPLRMLLLDSYYDEYKG 289
Query: 751 VICHVAVVDGALQKGTKISSVATGQTYEVLDVGFMHPELKSTGVLFTGQVGYIVTGMRST 572
VICHVAVVDGAL+KG KISS ATG TYEV DVG MHPELKSTGVL TGQVGY+V+GMRST
Sbjct: 290 VICHVAVVDGALRKGDKISSSATGHTYEVFDVGIMHPELKSTGVLLTGQVGYVVSGMRST 349
Query: 571 KEARVGDTLFHNKSIVEPLPGFKPAKHMVFSGVYPADGSDFEALNHAIERLTCNDASVSV 392
KEARVGDTL HNKSIVEPLPGFKPAKHMVFSG+YPADGSDFEALNHAIERLTCNDASVSV
Sbjct: 350 KEARVGDTLHHNKSIVEPLPGFKPAKHMVFSGLYPADGSDFEALNHAIERLTCNDASVSV 409
Query: 391 AKESSTAXXXXXXXXXXXXLHMDVFHQRLEQEHGARVISTTPTVPYIFEFSDGSKVQVQN 212
KESSTA LHMDVFHQRLEQE+GA +IST PTVPYIFE+SDGSK+QVQN
Sbjct: 410 TKESSTALGLGFRCGFLGLLHMDVFHQRLEQEYGAHIISTVPTVPYIFEYSDGSKIQVQN 469
Query: 211 PAALALTPGKRVTACWEPTVMATIIIPSEYVGPVITLCSDRRGQQLEYSFIDSQRAFMKY 32
PAALA PGKRVTACWEPTV+ATIIIPSEYVGPVITLCS+RRG+QLEYSFIDSQRAFMKY
Sbjct: 470 PAALASNPGKRVTACWEPTVIATIIIPSEYVGPVITLCSERRGEQLEYSFIDSQRAFMKY 529
Query: 31 RIPLREIVVD 2
R+PLREIVVD
Sbjct: 530 RLPLREIVVD 539
>ref|XP_002517483.1| GTP-binding protein lepA, putative [Ricinus communis]
gi|317411652|sp|B9RUN8.1|GUF1_RICCO RecName:
Full=Translation factor GUF1 homolog, mitochondrial;
AltName: Full=Elongation factor 4 homolog; Short=EF-4;
AltName: Full=GTPase GUF1 homolog; AltName:
Full=Ribosomal back-translocase; Flags: Precursor
gi|223543494|gb|EEF45025.1| GTP-binding protein lepA,
putative [Ricinus communis]
Length = 673
Score = 802 bits (2072), Expect = 0.0
Identities = 404/479 (84%), Positives = 434/479 (90%), Gaps = 3/479 (0%)
Frame = -3
Query: 1429 RKEN--NVDLSLYPTDRIRNFSIIAHVDHGKSTLADRLLELTGTIKRGLGQPQYLDKLQV 1256
RKEN +DLS YPT+RIRNFSIIAHVDHGKSTLADRLLELTGTIKRG GQPQYLDKLQV
Sbjct: 53 RKENINPIDLSKYPTERIRNFSIIAHVDHGKSTLADRLLELTGTIKRGHGQPQYLDKLQV 112
Query: 1255 ERERGITVKAQTATMFHSHNY-GSDISDTGDPPSFLLNLIDTPGHVDFSYEVSRSLAACQ 1079
ERERGITVKAQTATMFH +N+ G +I D +PP+FLLNLIDTPGHVDFSYEVSRSLAACQ
Sbjct: 113 ERERGITVKAQTATMFHKYNFHGPNIGDAHEPPTFLLNLIDTPGHVDFSYEVSRSLAACQ 172
Query: 1078 GALLVVDAAQGVQAQTVANFYLAFESNLTIIPIINKIDQPTADPDRIKAQLKSMFDLDPE 899
GALLVVDAAQGVQAQTVANFYLAFESNLT+IP+INKIDQPTADPDR+KAQLKSMFDL+P
Sbjct: 173 GALLVVDAAQGVQAQTVANFYLAFESNLTVIPVINKIDQPTADPDRVKAQLKSMFDLEPS 232
Query: 898 DALLTSAKTGQGLEHVLPAVIERIPPPPGKSSLPLRMLLLDSYYDEYKGVICHVAVVDGA 719
D LLTSAKTGQGLE VLPAVIERIP PPG S+ PLRMLLLDSYYDEYKGVICHVAVVDG
Sbjct: 233 DCLLTSAKTGQGLEQVLPAVIERIPSPPGYSNSPLRMLLLDSYYDEYKGVICHVAVVDGM 292
Query: 718 LQKGTKISSVATGQTYEVLDVGFMHPELKSTGVLFTGQVGYIVTGMRSTKEARVGDTLFH 539
L+KG KISS ATG +YE+LDVGFMHPEL TG+L TGQVGY+V+GMRSTKEARVGDTL+H
Sbjct: 293 LRKGDKISSAATGHSYEILDVGFMHPELTPTGILLTGQVGYVVSGMRSTKEARVGDTLYH 352
Query: 538 NKSIVEPLPGFKPAKHMVFSGVYPADGSDFEALNHAIERLTCNDASVSVAKESSTAXXXX 359
+++ VEPLPGFKPAKHMVFSG+YPADGSDF+ALNHAIERLTCNDASVSV KESS+A
Sbjct: 353 SRTSVEPLPGFKPAKHMVFSGLYPADGSDFDALNHAIERLTCNDASVSVTKESSSALGLG 412
Query: 358 XXXXXXXXLHMDVFHQRLEQEHGARVISTTPTVPYIFEFSDGSKVQVQNPAALALTPGKR 179
LHMDVFHQRLEQE+GA VIST PTVPYIFE+SDGSKVQVQNPAAL P KR
Sbjct: 413 FRCGFLGLLHMDVFHQRLEQEYGAHVISTVPTVPYIFEYSDGSKVQVQNPAALPSNPKKR 472
Query: 178 VTACWEPTVMATIIIPSEYVGPVITLCSDRRGQQLEYSFIDSQRAFMKYRIPLREIVVD 2
VTA WEPTV+ATIIIPSEYVGPVITLCS+RRGQQLEYSFIDSQRAFMKYR+PLREIVVD
Sbjct: 473 VTASWEPTVVATIIIPSEYVGPVITLCSERRGQQLEYSFIDSQRAFMKYRLPLREIVVD 531
>ref|XP_004162590.1| PREDICTED: LOW QUALITY PROTEIN: translation factor GUF1 homolog,
mitochondrial-like [Cucumis sativus]
Length = 766
Score = 786 bits (2029), Expect = 0.0
Identities = 396/483 (81%), Positives = 425/483 (87%)
Frame = -3
Query: 1450 CIHPRTNRKENNVDLSLYPTDRIRNFSIIAHVDHGKSTLADRLLELTGTIKRGLGQPQYL 1271
C R N KE +DL+ YP +RIRNFSIIAHVDHGKSTLADRLLELTGTIKRG GQPQYL
Sbjct: 144 CSPSRQNLKEAGIDLTQYPPERIRNFSIIAHVDHGKSTLADRLLELTGTIKRGHGQPQYL 203
Query: 1270 DKLQVERERGITVKAQTATMFHSHNYGSDISDTGDPPSFLLNLIDTPGHVDFSYEVSRSL 1091
DKLQVERERGITVKAQTATMFH N D +T + P FL+NLIDTPGHVDFSYEVSRSL
Sbjct: 204 DKLQVERERGITVKAQTATMFHKCNLVGD--NTSEQPPFLINLIDTPGHVDFSYEVSRSL 261
Query: 1090 AACQGALLVVDAAQGVQAQTVANFYLAFESNLTIIPIINKIDQPTADPDRIKAQLKSMFD 911
AACQGALLVVDAAQGVQAQTVANFYLAFESNLT+IP+INKIDQPTADPDR+KAQLKSMFD
Sbjct: 262 AACQGALLVVDAAQGVQAQTVANFYLAFESNLTVIPVINKIDQPTADPDRVKAQLKSMFD 321
Query: 910 LDPEDALLTSAKTGQGLEHVLPAVIERIPPPPGKSSLPLRMLLLDSYYDEYKGVICHVAV 731
L+P ALLTSAKTGQGLE VLPA+IERIPPPPGKS+ PLRMLLLDSYYDEYKGVICHVAV
Sbjct: 322 LEPTHALLTSAKTGQGLEQVLPAIIERIPPPPGKSTSPLRMLLLDSYYDEYKGVICHVAV 381
Query: 730 VDGALQKGTKISSVATGQTYEVLDVGFMHPELKSTGVLFTGQVGYIVTGMRSTKEARVGD 551
VDG L+KG KISS ATGQ YEVLDVG MHPEL STG+L TGQVGY+V+GMRSTKEAR+GD
Sbjct: 382 VDGVLRKGDKISSAATGQAYEVLDVGIMHPELTSTGILLTGQVGYVVSGMRSTKEARIGD 441
Query: 550 TLFHNKSIVEPLPGFKPAKHMVFSGVYPADGSDFEALNHAIERLTCNDASVSVAKESSTA 371
TL +K++VEPLPGFKP KHMVFSG++PADGSDF+ALNHAIERLTCNDASVSV KE+STA
Sbjct: 442 TLHQSKTVVEPLPGFKPVKHMVFSGLFPADGSDFDALNHAIERLTCNDASVSVTKETSTA 501
Query: 370 XXXXXXXXXXXXLHMDVFHQRLEQEHGARVISTTPTVPYIFEFSDGSKVQVQNPAALALT 191
LHMDVFHQRLEQE+GA VIST PTVPYIFE+SDGSK VQNPAAL
Sbjct: 502 LGLGFRCGFLGLLHMDVFHQRLEQEYGAHVISTVPTVPYIFEYSDGSKAHVQNPAALPSN 561
Query: 190 PGKRVTACWEPTVMATIIIPSEYVGPVITLCSDRRGQQLEYSFIDSQRAFMKYRIPLREI 11
P KRV A WEPTV+ATIIIPSEYVG VITLCS+RRGQQLEYSFIDSQRAFMKYR+PLREI
Sbjct: 562 PKKRVIAGWEPTVLATIIIPSEYVGAVITLCSERRGQQLEYSFIDSQRAFMKYRLPLREI 621
Query: 10 VVD 2
VVD
Sbjct: 622 VVD 624
>ref|XP_004148706.1| PREDICTED: translation factor GUF1 homolog, mitochondrial-like
[Cucumis sativus]
Length = 766
Score = 786 bits (2029), Expect = 0.0
Identities = 396/483 (81%), Positives = 425/483 (87%)
Frame = -3
Query: 1450 CIHPRTNRKENNVDLSLYPTDRIRNFSIIAHVDHGKSTLADRLLELTGTIKRGLGQPQYL 1271
C R N KE +DL+ YP +RIRNFSIIAHVDHGKSTLADRLLELTGTIKRG GQPQYL
Sbjct: 144 CSPSRQNLKEAGIDLTQYPPERIRNFSIIAHVDHGKSTLADRLLELTGTIKRGHGQPQYL 203
Query: 1270 DKLQVERERGITVKAQTATMFHSHNYGSDISDTGDPPSFLLNLIDTPGHVDFSYEVSRSL 1091
DKLQVERERGITVKAQTATMFH N D +T + P FL+NLIDTPGHVDFSYEVSRSL
Sbjct: 204 DKLQVERERGITVKAQTATMFHKCNLVGD--NTSEQPPFLINLIDTPGHVDFSYEVSRSL 261
Query: 1090 AACQGALLVVDAAQGVQAQTVANFYLAFESNLTIIPIINKIDQPTADPDRIKAQLKSMFD 911
AACQGALLVVDAAQGVQAQTVANFYLAFESNLT+IP+INKIDQPTADPDR+KAQLKSMFD
Sbjct: 262 AACQGALLVVDAAQGVQAQTVANFYLAFESNLTVIPVINKIDQPTADPDRVKAQLKSMFD 321
Query: 910 LDPEDALLTSAKTGQGLEHVLPAVIERIPPPPGKSSLPLRMLLLDSYYDEYKGVICHVAV 731
L+P ALLTSAKTGQGLE VLPA+IERIPPPPGKS+ PLRMLLLDSYYDEYKGVICHVAV
Sbjct: 322 LEPTHALLTSAKTGQGLEQVLPAIIERIPPPPGKSTSPLRMLLLDSYYDEYKGVICHVAV 381
Query: 730 VDGALQKGTKISSVATGQTYEVLDVGFMHPELKSTGVLFTGQVGYIVTGMRSTKEARVGD 551
VDG L+KG KISS ATGQ YEVLDVG MHPEL STG+L TGQVGY+V+GMRSTKEAR+GD
Sbjct: 382 VDGVLRKGDKISSAATGQAYEVLDVGIMHPELTSTGILLTGQVGYVVSGMRSTKEARIGD 441
Query: 550 TLFHNKSIVEPLPGFKPAKHMVFSGVYPADGSDFEALNHAIERLTCNDASVSVAKESSTA 371
TL +K++VEPLPGFKP KHMVFSG++PADGSDF+ALNHAIERLTCNDASVSV KE+STA
Sbjct: 442 TLHQSKTVVEPLPGFKPVKHMVFSGLFPADGSDFDALNHAIERLTCNDASVSVTKETSTA 501
Query: 370 XXXXXXXXXXXXLHMDVFHQRLEQEHGARVISTTPTVPYIFEFSDGSKVQVQNPAALALT 191
LHMDVFHQRLEQE+GA VIST PTVPYIFE+SDGSK VQNPAAL
Sbjct: 502 LGLGFRCGFLGLLHMDVFHQRLEQEYGAHVISTVPTVPYIFEYSDGSKAHVQNPAALPSN 561
Query: 190 PGKRVTACWEPTVMATIIIPSEYVGPVITLCSDRRGQQLEYSFIDSQRAFMKYRIPLREI 11
P KRV A WEPTV+ATIIIPSEYVG VITLCS+RRGQQLEYSFIDSQRAFMKYR+PLREI
Sbjct: 562 PKKRVIAGWEPTVLATIIIPSEYVGAVITLCSERRGQQLEYSFIDSQRAFMKYRLPLREI 621
Query: 10 VVD 2
VVD
Sbjct: 622 VVD 624
>ref|XP_003533605.1| PREDICTED: translation factor GUF1 homolog, mitochondrial-like
[Glycine max]
Length = 675
Score = 781 bits (2017), Expect = 0.0
Identities = 387/479 (80%), Positives = 423/479 (88%), Gaps = 1/479 (0%)
Frame = -3
Query: 1435 TNRKENNVDLSLYPTDRIRNFSIIAHVDHGKSTLADRLLELTGTIKRGLGQPQYLDKLQV 1256
T R+++ +DLS YP + +RNFSIIAHVDHGKSTLADRLLELTGTIK+G GQPQYLDKLQV
Sbjct: 55 TTREKSTIDLSQYPKELVRNFSIIAHVDHGKSTLADRLLELTGTIKKGHGQPQYLDKLQV 114
Query: 1255 ERERGITVKAQTATMFHSHNY-GSDISDTGDPPSFLLNLIDTPGHVDFSYEVSRSLAACQ 1079
ERERGITVKAQTATMF+ H G D SD + P FLLNLIDTPGHVDFSYEVSRSLAACQ
Sbjct: 115 ERERGITVKAQTATMFYKHGVNGDDCSDGKESPKFLLNLIDTPGHVDFSYEVSRSLAACQ 174
Query: 1078 GALLVVDAAQGVQAQTVANFYLAFESNLTIIPIINKIDQPTADPDRIKAQLKSMFDLDPE 899
G LLVVDAAQGVQAQTVANFYLAFESNLTI+P+INKIDQPTADPDR+KAQLKSMFDLDP
Sbjct: 175 GVLLVVDAAQGVQAQTVANFYLAFESNLTIVPVINKIDQPTADPDRVKAQLKSMFDLDPS 234
Query: 898 DALLTSAKTGQGLEHVLPAVIERIPPPPGKSSLPLRMLLLDSYYDEYKGVICHVAVVDGA 719
D LLTSAKTG+GL+ +LPAVIERIP PPG+S PLRMLLLDSYYDEYKGVICHVAVVDG
Sbjct: 235 DVLLTSAKTGEGLQQILPAVIERIPAPPGRSDSPLRMLLLDSYYDEYKGVICHVAVVDGV 294
Query: 718 LQKGTKISSVATGQTYEVLDVGFMHPELKSTGVLFTGQVGYIVTGMRSTKEARVGDTLFH 539
L+KG KISS ATGQ+YE D+G MHPEL TG+L TGQVGY+V+GMRSTKEARVGDT++H
Sbjct: 295 LRKGDKISSAATGQSYEASDIGIMHPELTPTGILLTGQVGYVVSGMRSTKEARVGDTIYH 354
Query: 538 NKSIVEPLPGFKPAKHMVFSGVYPADGSDFEALNHAIERLTCNDASVSVAKESSTAXXXX 359
+S VEPLPGFKPAKHMVFSG+YPADGSDFEALNHAIERLTCNDASVS+AKE+STA
Sbjct: 355 TRSTVEPLPGFKPAKHMVFSGLYPADGSDFEALNHAIERLTCNDASVSIAKETSTALGLG 414
Query: 358 XXXXXXXXLHMDVFHQRLEQEHGARVISTTPTVPYIFEFSDGSKVQVQNPAALALTPGKR 179
LHMDVFHQRLEQE+GA VIST PTVPYIFEF DGSK++VQNPA+L P +
Sbjct: 415 FRCGFLGLLHMDVFHQRLEQEYGAHVISTVPTVPYIFEFHDGSKLEVQNPASLPSNPKHK 474
Query: 178 VTACWEPTVMATIIIPSEYVGPVITLCSDRRGQQLEYSFIDSQRAFMKYRIPLREIVVD 2
VTACWEPTV+ATIIIPSEYVGPVITL S+RRGQQLEYSFIDSQR FMKYR+PLREIVVD
Sbjct: 475 VTACWEPTVLATIIIPSEYVGPVITLVSERRGQQLEYSFIDSQRVFMKYRLPLREIVVD 533