BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008396
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280012.1| PREDICTED: 40S ribosomal protein S13 [Vitis ...    54   6e-13
gb|AAT40507.2| 40S ribosomal protein S13, putative [Solanum demi...    54   8e-13
ref|NP_001234162.1| cytoplasmic ribosomal protein S13 [Solanum l...    54   8e-13
gb|ABB86273.1| cytoplasmic ribosomal protein S13-like [Solanum t...    54   8e-13
ref|XP_002510918.1| 40S ribosomal protein S13, putative [Ricinus...    52   8e-13

>ref|XP_002280012.1| PREDICTED: 40S ribosomal protein S13 [Vitis vinifera]
           gi|147820740|emb|CAN69640.1| hypothetical protein
           VITISV_028568 [Vitis vinifera]
           gi|296089171|emb|CBI38874.3| unnamed protein product
           [Vitis vinifera]
          Length = 151

 Score = 53.5 bits (127), Expect(2) = 6e-13
 Identities = 35/72 (48%), Positives = 35/72 (48%)
 Frame = +2

Query: 68  IVQVKSVTGSKILHILKAHSIAFISVYLFIGXXXXXXXXXXXXXXVALYCGVIGLTPEIP 247
           I QVKSVTGSKIL ILKAH                                  GL PEIP
Sbjct: 60  IAQVKSVTGSKILRILKAH----------------------------------GLAPEIP 85

Query: 248 EDLYHLIKKAVA 283
           EDLYHLIKKAVA
Sbjct: 86  EDLYHLIKKAVA 97



 Score = 45.1 bits (105), Expect(2) = 6e-13
 Identities = 20/22 (90%), Positives = 21/22 (95%)
 Frame = +3

Query: 3  DVEENICKFAKKGLPPSQIGVI 68
          DVEENICKFAKKG+ PSQIGVI
Sbjct: 32 DVEENICKFAKKGMTPSQIGVI 53


>gb|AAT40507.2| 40S ribosomal protein S13, putative [Solanum demissum]
          Length = 165

 Score = 53.5 bits (127), Expect(2) = 8e-13
 Identities = 35/72 (48%), Positives = 35/72 (48%)
 Frame = +2

Query: 68  IVQVKSVTGSKILHILKAHSIAFISVYLFIGXXXXXXXXXXXXXXVALYCGVIGLTPEIP 247
           I QVKSVTGSKIL ILKAH                                  GL PEIP
Sbjct: 85  IAQVKSVTGSKILRILKAH----------------------------------GLAPEIP 110

Query: 248 EDLYHLIKKAVA 283
           EDLYHLIKKAVA
Sbjct: 111 EDLYHLIKKAVA 122



 Score = 44.7 bits (104), Expect(2) = 8e-13
 Identities = 20/22 (90%), Positives = 21/22 (95%)
 Frame = +3

Query: 3   DVEENICKFAKKGLPPSQIGVI 68
           DVE+NICKFAKKGL PSQIGVI
Sbjct: 57  DVEDNICKFAKKGLTPSQIGVI 78


>ref|NP_001234162.1| cytoplasmic ribosomal protein S13 [Solanum lycopersicum]
           gi|68449762|gb|AAY97868.1| cytoplasmic ribosomal protein
           S13 [Solanum lycopersicum]
          Length = 151

 Score = 53.5 bits (127), Expect(2) = 8e-13
 Identities = 35/72 (48%), Positives = 35/72 (48%)
 Frame = +2

Query: 68  IVQVKSVTGSKILHILKAHSIAFISVYLFIGXXXXXXXXXXXXXXVALYCGVIGLTPEIP 247
           I QVKSVTGSKIL ILKAH                                  GL PEIP
Sbjct: 60  IAQVKSVTGSKILRILKAH----------------------------------GLAPEIP 85

Query: 248 EDLYHLIKKAVA 283
           EDLYHLIKKAVA
Sbjct: 86  EDLYHLIKKAVA 97



 Score = 44.7 bits (104), Expect(2) = 8e-13
 Identities = 20/22 (90%), Positives = 21/22 (95%)
 Frame = +3

Query: 3  DVEENICKFAKKGLPPSQIGVI 68
          DVE+NICKFAKKGL PSQIGVI
Sbjct: 32 DVEDNICKFAKKGLTPSQIGVI 53


>gb|ABB86273.1| cytoplasmic ribosomal protein S13-like [Solanum tuberosum]
          Length = 151

 Score = 53.5 bits (127), Expect(2) = 8e-13
 Identities = 35/72 (48%), Positives = 35/72 (48%)
 Frame = +2

Query: 68  IVQVKSVTGSKILHILKAHSIAFISVYLFIGXXXXXXXXXXXXXXVALYCGVIGLTPEIP 247
           I QVKSVTGSKIL ILKAH                                  GL PEIP
Sbjct: 60  IAQVKSVTGSKILRILKAH----------------------------------GLAPEIP 85

Query: 248 EDLYHLIKKAVA 283
           EDLYHLIKKAVA
Sbjct: 86  EDLYHLIKKAVA 97



 Score = 44.7 bits (104), Expect(2) = 8e-13
 Identities = 20/22 (90%), Positives = 21/22 (95%)
 Frame = +3

Query: 3  DVEENICKFAKKGLPPSQIGVI 68
          DVE+NICKFAKKGL PSQIGVI
Sbjct: 32 DVEDNICKFAKKGLTPSQIGVI 53


>ref|XP_002510918.1| 40S ribosomal protein S13, putative [Ricinus communis]
           gi|223550033|gb|EEF51520.1| 40S ribosomal protein S13,
           putative [Ricinus communis]
          Length = 112

 Score = 52.4 bits (124), Expect(2) = 8e-13
 Identities = 34/72 (47%), Positives = 35/72 (48%)
 Frame = +2

Query: 68  IVQVKSVTGSKILHILKAHSIAFISVYLFIGXXXXXXXXXXXXXXVALYCGVIGLTPEIP 247
           I QV+SVTGSKIL ILKAH                                  GL PEIP
Sbjct: 60  IAQVRSVTGSKILRILKAH----------------------------------GLAPEIP 85

Query: 248 EDLYHLIKKAVA 283
           EDLYHLIKKAVA
Sbjct: 86  EDLYHLIKKAVA 97



 Score = 45.8 bits (107), Expect(2) = 8e-13
 Identities = 21/22 (95%), Positives = 21/22 (95%)
 Frame = +3

Query: 3  DVEENICKFAKKGLPPSQIGVI 68
          DVEENICKFAKKGL PSQIGVI
Sbjct: 32 DVEENICKFAKKGLTPSQIGVI 53