BLASTX nr result

ID: Coptis23_contig00008385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008385
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275558.1| PREDICTED: uncharacterized protein LOC100252...    71   1e-10
ref|XP_002320740.1| predicted protein [Populus trichocarpa] gi|2...    70   3e-10
ref|XP_003623784.1| hypothetical protein MTR_7g075640 [Medicago ...    65   1e-08
ref|XP_003623761.1| hypothetical protein MTR_7g075410 [Medicago ...    65   1e-08
ref|XP_002511747.1| conserved hypothetical protein [Ricinus comm...    65   1e-08

>ref|XP_002275558.1| PREDICTED: uncharacterized protein LOC100252268 [Vitis vinifera]
           gi|296089095|emb|CBI38798.3| unnamed protein product
           [Vitis vinifera]
          Length = 245

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 44/104 (42%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
 Frame = -3

Query: 416 DLRFDTIKELGGSYGSXXXXXXXXXXXXXXXXXXXXKIGEGQEFPGHEEIKFGDIVVXXX 237
           DLRF+   E     GS                    K  E  +FP HE+IKFG++V    
Sbjct: 132 DLRFEAELEKVAGLGSKRRERKKKYLESRKKKHKKAKTEENLDFPRHEKIKFGEVVEAPP 191

Query: 236 XXXXXXXXXXXK--VQDASHERLRLQAVEAYRKRKGWESRPGLH 111
                         VQDAS ERLRLQAV+AYRKRKGW SRPG+H
Sbjct: 192 KLVAVPKALKALKTVQDASQERLRLQAVDAYRKRKGWVSRPGIH 235


>ref|XP_002320740.1| predicted protein [Populus trichocarpa] gi|222861513|gb|EEE99055.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 37/63 (58%), Positives = 41/63 (65%)
 Frame = -3

Query: 299 EGQEFPGHEEIKFGDIVVXXXXXXXXXXXXXXKVQDASHERLRLQAVEAYRKRKGWESRP 120
           E Q+FPG E+I+FGD VV               V DAS ERLRLQA+EAYR RKGW SRP
Sbjct: 235 EWQDFPGCEQIQFGD-VVQAPPKFTAPSKLLKNVHDASRERLRLQAIEAYRGRKGWTSRP 293

Query: 119 GLH 111
           GLH
Sbjct: 294 GLH 296


>ref|XP_003623784.1| hypothetical protein MTR_7g075640 [Medicago truncatula]
           gi|355498799|gb|AES80002.1| hypothetical protein
           MTR_7g075640 [Medicago truncatula]
          Length = 215

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 34/60 (56%), Positives = 37/60 (61%)
 Frame = -3

Query: 290 EFPGHEEIKFGDIVVXXXXXXXXXXXXXXKVQDASHERLRLQAVEAYRKRKGWESRPGLH 111
           EFPG E+IKFGDIV                 QDASHERLRL+A+E YR RK W SRPG H
Sbjct: 147 EFPGQEKIKFGDIVQAPPKLSFNPKGFKIS-QDASHERLRLRAIEDYRSRKAWASRPGNH 205


>ref|XP_003623761.1| hypothetical protein MTR_7g075410 [Medicago truncatula]
           gi|355498776|gb|AES79979.1| hypothetical protein
           MTR_7g075410 [Medicago truncatula]
          Length = 163

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 34/60 (56%), Positives = 37/60 (61%)
 Frame = -3

Query: 290 EFPGHEEIKFGDIVVXXXXXXXXXXXXXXKVQDASHERLRLQAVEAYRKRKGWESRPGLH 111
           EFPG E+IKFGDIV                 QDASHERLRL+A+E YR RK W SRPG H
Sbjct: 95  EFPGQEKIKFGDIVQAPPKLSFNPKGFKIS-QDASHERLRLRAIEDYRSRKAWASRPGNH 153


>ref|XP_002511747.1| conserved hypothetical protein [Ricinus communis]
           gi|223548927|gb|EEF50416.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 214

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 34/62 (54%), Positives = 39/62 (62%)
 Frame = -3

Query: 299 EGQEFPGHEEIKFGDIVVXXXXXXXXXXXXXXKVQDASHERLRLQAVEAYRKRKGWESRP 120
           E  +FPG E IKFGD+V                V DAS ER+RL+A+EAYRKRKGW SRP
Sbjct: 148 ENLDFPGRELIKFGDVV------QAPPKLVFKNVPDASQERVRLKAIEAYRKRKGWTSRP 201

Query: 119 GL 114
           GL
Sbjct: 202 GL 203


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