BLASTX nr result

ID: Coptis23_contig00008378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008378
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278824.1| PREDICTED: transcription factor bHLH71 [Viti...   117   2e-24
gb|AEW69789.1| Hop-interacting protein THI018 [Solanum lycopersi...   108   9e-22
ref|NP_001242622.1| uncharacterized protein LOC100783542 [Glycin...   105   7e-21
ref|XP_003531959.1| PREDICTED: transcription factor bHLH96-like ...   104   2e-20
ref|XP_003628791.1| Transcription factor bHLH96 [Medicago trunca...   102   5e-20

>ref|XP_002278824.1| PREDICTED: transcription factor bHLH71 [Vitis vinifera]
          Length = 315

 Score =  117 bits (292), Expect = 2e-24
 Identities = 81/175 (46%), Positives = 95/175 (54%), Gaps = 3/175 (1%)
 Frame = -3

Query: 518 EALVPHDFSNFNMHENACSSQHSIHDH-NGGFLLPNDASFANLRPLDLHGPLD-PSSSMP 345
           EAL  +D  NF ++E   ++ ++ H     GF L N      L+P DL G LD PS+ M 
Sbjct: 4   EALSSNDLLNFIIYETISATPYTCHAPLEAGFSLENP-----LKPQDLGGALDTPSTVMD 58

Query: 344 SRRFKSTKASDAAXXXXXXXXXXXXXXR-VCKNKEEAETQRMTHINVERNRRKQMNEYLX 168
            R     + S+                  VCKNKEEAETQRMTHI VERNRR+QMNE+L 
Sbjct: 59  PRCSMGPETSNRKQNLAVQGRKKRRRRARVCKNKEEAETQRMTHIAVERNRRRQMNEHL- 117

Query: 167 XXXXXXXXXXXXXXXQMNEYLAILRSLMPESYTHRGDQASIVGGAIEYVKELEQL 3
                                AILRSLMPESY  RGDQASIVGGAIE+VKELE L
Sbjct: 118 ---------------------AILRSLMPESYVQRGDQASIVGGAIEFVKELEHL 151


>gb|AEW69789.1| Hop-interacting protein THI018 [Solanum lycopersicum]
          Length = 328

 Score =  108 bits (270), Expect = 9e-22
 Identities = 73/167 (43%), Positives = 88/167 (52%), Gaps = 3/167 (1%)
 Frame = -3

Query: 494 SNFNMHENACSSQHSIHDHNGGFLL-PNDASFANLRPLDLHGPLDPSSSMP--SRRFKST 324
           SN N+ ENA    +  H+ N  FLL P D  F    PL+    +  S   P  SR   + 
Sbjct: 29  SNNNLDENALFFDN--HEENNAFLLKPQD--FCTTTPLEQQYSIAASVPRPESSREKNNL 84

Query: 323 KASDAAXXXXXXXXXXXXXXRVCKNKEEAETQRMTHINVERNRRKQMNEYLXXXXXXXXX 144
             +  +              ++CKNKEEAE QRMTHI VERNRRKQMNE+L         
Sbjct: 85  SVAAQSGGGGGGRKKRRRRPKICKNKEEAENQRMTHIAVERNRRKQMNEHL--------- 135

Query: 143 XXXXXXXQMNEYLAILRSLMPESYTHRGDQASIVGGAIEYVKELEQL 3
                        ++LRSLMPESY  RGDQASIVGGAIE+VKELE +
Sbjct: 136 -------------SVLRSLMPESYVQRGDQASIVGGAIEFVKELEHI 169


>ref|NP_001242622.1| uncharacterized protein LOC100783542 [Glycine max]
           gi|255636604|gb|ACU18640.1| unknown [Glycine max]
          Length = 303

 Score =  105 bits (262), Expect = 7e-21
 Identities = 67/172 (38%), Positives = 86/172 (50%)
 Frame = -3

Query: 518 EALVPHDFSNFNMHENACSSQHSIHDHNGGFLLPNDASFANLRPLDLHGPLDPSSSMPSR 339
           E L  ++FSNF +++   ++  S H       L +  ++    P   +  L   +   S 
Sbjct: 4   ETLASNEFSNFIIYDTISATPFSSHGSPEASFLESLVNYQEHDPAFDNSALRTRNHQASE 63

Query: 338 RFKSTKASDAAXXXXXXXXXXXXXXRVCKNKEEAETQRMTHINVERNRRKQMNEYLXXXX 159
           +    +  +                RVCKNKEEAETQR+TH  VERNRRKQMNE+L    
Sbjct: 64  QESVGRRQNVVGVQVQGRKKRRRKPRVCKNKEEAETQRITHTTVERNRRKQMNEHL---- 119

Query: 158 XXXXXXXXXXXXQMNEYLAILRSLMPESYTHRGDQASIVGGAIEYVKELEQL 3
                              +LRSLMPESY  RGDQASIVGGAIE+VKELE L
Sbjct: 120 ------------------VVLRSLMPESYVQRGDQASIVGGAIEFVKELEHL 153


>ref|XP_003531959.1| PREDICTED: transcription factor bHLH96-like [Glycine max]
          Length = 303

 Score =  104 bits (259), Expect = 2e-20
 Identities = 73/175 (41%), Positives = 87/175 (49%), Gaps = 3/175 (1%)
 Frame = -3

Query: 518 EALVPHDFSNFNMHENACSSQHSIHDHNGGFLLPNDASFANLRPLDLHGPLDPSSSMPSR 339
           E L  ++FSNF +++   ++  S H       L    SF N +    H   D  +    +
Sbjct: 4   ETLQSNEFSNFIIYDTISATPFSSHGSPEASFLE---SFVNYQEQHDHPTFDNCAMRTRK 60

Query: 338 RFKSTKASDAAXXXXXXXXXXXXXXR---VCKNKEEAETQRMTHINVERNRRKQMNEYLX 168
           R  S   S                 R   VCKN EEAETQR+THI VERNRRKQMNE+L 
Sbjct: 61  REASEPESIGRRQNSVAVQGRKKRRRKPRVCKNTEEAETQRITHITVERNRRKQMNEHL- 119

Query: 167 XXXXXXXXXXXXXXXQMNEYLAILRSLMPESYTHRGDQASIVGGAIEYVKELEQL 3
                                A+LRSLMPESY  RGDQASIVGGAIE+VKELE L
Sbjct: 120 ---------------------AVLRSLMPESYVQRGDQASIVGGAIEFVKELEHL 153


>ref|XP_003628791.1| Transcription factor bHLH96 [Medicago truncatula]
           gi|355522813|gb|AET03267.1| Transcription factor bHLH96
           [Medicago truncatula]
          Length = 312

 Score =  102 bits (255), Expect = 5e-20
 Identities = 56/86 (65%), Positives = 60/86 (69%)
 Frame = -3

Query: 260 VCKNKEEAETQRMTHINVERNRRKQMNEYLXXXXXXXXXXXXXXXXQMNEYLAILRSLMP 81
           VCKNKEEAETQR+THI VERNRRKQMNE+L                      A+LRSLMP
Sbjct: 102 VCKNKEEAETQRITHITVERNRRKQMNEHL----------------------AVLRSLMP 139

Query: 80  ESYTHRGDQASIVGGAIEYVKELEQL 3
           ESY  RGDQASIVGGAIE+VKELE L
Sbjct: 140 ESYVQRGDQASIVGGAIEFVKELEHL 165


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