BLASTX nr result

ID: Coptis23_contig00008376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008376
         (821 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272890.1| PREDICTED: uncharacterized protein LOC100267...   209   6e-52
gb|AFK34560.1| unknown [Medicago truncatula]                          183   4e-44
ref|XP_002512224.1| conserved hypothetical protein [Ricinus comm...   181   2e-43
ref|NP_001238033.1| uncharacterized protein LOC100500690 precurs...   180   4e-43
ref|XP_003556465.1| PREDICTED: uncharacterized protein LOC100805...   176   4e-42

>ref|XP_002272890.1| PREDICTED: uncharacterized protein LOC100267439 [Vitis vinifera]
           gi|298204883|emb|CBI34190.3| unnamed protein product
           [Vitis vinifera]
          Length = 206

 Score =  209 bits (532), Expect = 6e-52
 Identities = 92/178 (51%), Positives = 128/178 (71%), Gaps = 3/178 (1%)
 Frame = +2

Query: 23  MAFSYLIVFVALLHILKPITAT---YNSSIDSYLANLCREVECGKGTCKASLDYTFNFIC 193
           MA + L+  +ALL +L P++A    ++ ++  +L NLC EVECGKGTCKASL+Y FNFIC
Sbjct: 1   MASTNLMASMALLLLLLPLSAMGDDWSPALSPFLDNLCDEVECGKGTCKASLEYKFNFIC 60

Query: 194 ECDSGWTQVSKGEEDDGHSFLPCIYPNCTMNYSCGEAPAPTPNVEEPPTNKSFYDPCNWA 373
           ECDSGW + ++G+ +DG  +LPC+ PNCT++YSC  AP+P P V   P N+S +DPC W 
Sbjct: 61  ECDSGWKR-TRGDNEDGLKYLPCVIPNCTLDYSCMTAPSPAPAV---PHNESAFDPCYWM 116

Query: 374 YCGDGSCSPTSGHGYRCDCKQGYTNLMNSTAFPCFGECVIGSDCTGLGVTVPVSIPSS 547
           YCG+G C+ +S +GY+C+C  GY NL+N + +PC+ EC +GSDC  LG+ V  S  SS
Sbjct: 117 YCGEGKCTRSSAYGYKCECNSGYQNLLNISVYPCYSECALGSDCEKLGIKVSNSTSSS 174


>gb|AFK34560.1| unknown [Medicago truncatula]
          Length = 203

 Score =  183 bits (465), Expect = 4e-44
 Identities = 85/193 (44%), Positives = 115/193 (59%), Gaps = 2/193 (1%)
 Frame = +2

Query: 26  AFSYLIVFVALLHILKPITATYNSSIDSYLANLCREVECGKGTCKASLDYTFNFICECDS 205
           +F  L +   +L +L P+ A      D  L  +C EVECGKG C  +  Y  NF+CECDS
Sbjct: 3   SFKLLSLIAVVLMLLLPMAAK-GDFFDDVLEKVCEEVECGKGNCVVNSSYPLNFVCECDS 61

Query: 206 GWTQVSKGEEDDGH--SFLPCIYPNCTMNYSCGEAPAPTPNVEEPPTNKSFYDPCNWAYC 379
           GW + ++ E+DD +  SFLPC+ P C++NY C  AP P P  +  P N S +DPC WAYC
Sbjct: 62  GWKR-TQDEDDDIYATSFLPCVIPQCSLNYGCQPAPPPVPE-KTLPRNISAFDPCYWAYC 119

Query: 380 GDGSCSPTSGHGYRCDCKQGYTNLMNSTAFPCFGECVIGSDCTGLGVTVPVSIPSSVNNA 559
           G+G C+    H +RC+C   Y NL+N + FPC+ EC +GSDC+ LG+ VP S     ++A
Sbjct: 120 GEGQCTKNKTHTHRCECNPNYYNLLNISVFPCYSECTLGSDCSRLGIKVPNSTGDVDSHA 179

Query: 560 YSIIPRSFPWAMV 598
            SI    F W  V
Sbjct: 180 SSIFGGRFHWITV 192


>ref|XP_002512224.1| conserved hypothetical protein [Ricinus communis]
           gi|223548185|gb|EEF49676.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 204

 Score =  181 bits (458), Expect = 2e-43
 Identities = 81/193 (41%), Positives = 112/193 (58%), Gaps = 1/193 (0%)
 Frame = +2

Query: 23  MAFSYLIVFVALLHILKPITATYNSSIDSYLANLCREVECGKGTCKASLDYTFNFICECD 202
           MA      F+AL  +L P  A  ++     L  +C EVECGKGTCK  +     ++CEC+
Sbjct: 1   MAIVKKFCFLALFLVLLPTIALGDNRSTPILDAICNEVECGKGTCKGDILKPLGYVCECE 60

Query: 203 SGWTQVSKGEEDDGHSFLPCIYPNCTMNYSCGEAPAPTPNVEEPPTNKSFYDPCNWAYCG 382
           SGW +    + +D   FLPC+YP CT+NY   +   PTP  +  P N SFYDPC W +CG
Sbjct: 61  SGWARSPDADVNDTLQFLPCVYPKCTLNYDGCQPAPPTPPEKTVPLNSSFYDPCYWMFCG 120

Query: 383 DGSCSPTSGHGYRCDCKQGYTNLMNSTAFPCFGECVIGSDCTGLGVTVPVSIPS-SVNNA 559
           +G+C+  S + + C CK G++NL++   FPC+  C IGSDC  LG+ V  S  S   N A
Sbjct: 121 EGTCTKNSTYNHLCTCKSGFSNLLDVPYFPCYSPCTIGSDCASLGIKVSNSESSPGTNPA 180

Query: 560 YSIIPRSFPWAMV 598
            SI+P  F W ++
Sbjct: 181 SSILPGKFRWMII 193


>ref|NP_001238033.1| uncharacterized protein LOC100500690 precursor [Glycine max]
           gi|255630943|gb|ACU15834.1| unknown [Glycine max]
          Length = 204

 Score =  180 bits (456), Expect = 4e-43
 Identities = 80/194 (41%), Positives = 116/194 (59%), Gaps = 2/194 (1%)
 Frame = +2

Query: 23  MAFSYLIVFVALLHILKPITATYNSSIDSYLANLCREVECGKGTCKASLDYTFNFICECD 202
           M  S L+  +A+L I+    A    +I  +   +C EVECGKG+C  +  Y  NF+CECD
Sbjct: 1   MGSSKLLGIMAMLFIVLLPMAAKGDNITDFFDKVCEEVECGKGSCVVNTSYPLNFVCECD 60

Query: 203 SGWTQVSKGEEDDGHSFLPCIYPNCTMNYSCGEAPAPTPNVEEPPTNKSFYDPCNWAYCG 382
           SGW +    +++   SFLPC+ P C++NY C  AP P P  +  P N S +DPC WAYCG
Sbjct: 61  SGWKRTQDDDDEYATSFLPCVIPECSLNYGCQPAPPPVPE-KSFPHNFSAFDPCYWAYCG 119

Query: 383 DGSCSPTSGHGYRCDCKQGYTNLMNSTAFPCFGECVIGSDCTGLGVTVPVSI--PSSVNN 556
           +G+C+    H +RC+C+  Y NL+N + FPC+ EC +GSDC+ LG+ V  S     S ++
Sbjct: 120 EGTCTKNRTHTHRCECQPNYYNLLNISVFPCYSECTLGSDCSRLGIKVANSSTDSGSQDS 179

Query: 557 AYSIIPRSFPWAMV 598
           + SI    F W ++
Sbjct: 180 SASIFTGRFHWMVM 193


>ref|XP_003556465.1| PREDICTED: uncharacterized protein LOC100805440 [Glycine max]
          Length = 202

 Score =  176 bits (447), Expect = 4e-42
 Identities = 79/194 (40%), Positives = 115/194 (59%), Gaps = 2/194 (1%)
 Frame = +2

Query: 23  MAFSYLIVFVALLHILKPITATYNSSIDSYLANLCREVECGKGTCKASLDYTFNFICECD 202
           M  S L+  +A+L ++    A    +I  +L  +C EVECGKG+C  +  Y  NF+CECD
Sbjct: 1   MGSSKLLGTMAMLFVVLLPMAAKGDNITDFLDKVCEEVECGKGSCVVNTSYPLNFVCECD 60

Query: 203 SGWTQVSKGEEDDGHSFLPCIYPNCTMNYSCGEAPAPTPNVEEPPTNKSFYDPCNWAYCG 382
           SGW +    ++    SFLPC+ P C++NY C  AP P P  +  P N S +D C WAYCG
Sbjct: 61  SGWKRTQDDDDKYAASFLPCVIPECSLNYGCQPAPPPVPE-KSFPHNFSAFDTCYWAYCG 119

Query: 383 DGSCSPTSGHGYRCDCKQGYTNLMNSTAFPCFGECVIGSDCTGLGVTVPVSI--PSSVNN 556
           +G+C+    H +RC+C+  Y NL+N + FPC+ EC +GSDC+ LG+ V  S     S ++
Sbjct: 120 EGTCTKNRTHTHRCECQPNYYNLLNISVFPCYSECTLGSDCSRLGIKVANSSTDSGSQDS 179

Query: 557 AYSIIPRSFPWAMV 598
           + SI    F W ++
Sbjct: 180 SASIFTGKFHWIVM 193


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