BLASTX nr result

ID: Coptis23_contig00008368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008368
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269582.1| PREDICTED: uncharacterized protein LOC100242...    86   4e-15
gb|AFK37850.1| unknown [Lotus japonicus]                               84   1e-14
ref|XP_003609890.1| hypothetical protein MTR_4g124080 [Medicago ...    80   2e-13
gb|ACJ86204.1| unknown [Medicago truncatula] gi|388508412|gb|AFK...    80   2e-13
ref|XP_002314335.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12

>ref|XP_002269582.1| PREDICTED: uncharacterized protein LOC100242564 [Vitis vinifera]
           gi|147865786|emb|CAN81152.1| hypothetical protein
           VITISV_020818 [Vitis vinifera]
          Length = 362

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 37/63 (58%), Positives = 47/63 (74%)
 Frame = -3

Query: 490 KCMGKCRDGPNVRIVNECNPDLAENLDGPVRPQTNPLCIGVGLEDVGVIVANFLGQERQD 311
           KCMGKCR GPNVR++N      AE +D  VR   NPLC+GVGL+DVG+IV+NF G+  +D
Sbjct: 296 KCMGKCRVGPNVRVLNSIEGVEAEGMDDSVRTPANPLCVGVGLQDVGIIVSNFFGETHED 355

Query: 310 LGL 302
           +GL
Sbjct: 356 IGL 358


>gb|AFK37850.1| unknown [Lotus japonicus]
          Length = 334

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 38/66 (57%), Positives = 48/66 (72%)
 Frame = -3

Query: 490 KCMGKCRDGPNVRIVNECNPDLAENLDGPVRPQTNPLCIGVGLEDVGVIVANFLGQERQD 311
           KCMGKC+  PNVRI N  + +LAE L+  V+   NPLCIGVGLEDV  +VA FLG+  QD
Sbjct: 267 KCMGKCKSAPNVRIQNAVDHELAEGLNDSVKVPANPLCIGVGLEDVDAVVARFLGENYQD 326

Query: 310 LGLMVA 293
           +G++ A
Sbjct: 327 MGMVAA 332


>ref|XP_003609890.1| hypothetical protein MTR_4g124080 [Medicago truncatula]
           gi|355510945|gb|AES92087.1| hypothetical protein
           MTR_4g124080 [Medicago truncatula]
          Length = 341

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 35/66 (53%), Positives = 49/66 (74%)
 Frame = -3

Query: 490 KCMGKCRDGPNVRIVNECNPDLAENLDGPVRPQTNPLCIGVGLEDVGVIVANFLGQERQD 311
           KCMGKC+  PNVRI N  + ++ + +D  V+  +NPLCIGVGLEDV  IVA FLG++ +D
Sbjct: 273 KCMGKCKTAPNVRIQNSVDLNMVQGIDDSVKIPSNPLCIGVGLEDVDTIVARFLGEDYKD 332

Query: 310 LGLMVA 293
           +G++ A
Sbjct: 333 VGMVAA 338


>gb|ACJ86204.1| unknown [Medicago truncatula] gi|388508412|gb|AFK42272.1| unknown
           [Medicago truncatula] gi|388510858|gb|AFK43495.1|
           unknown [Medicago truncatula]
          Length = 341

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 35/66 (53%), Positives = 49/66 (74%)
 Frame = -3

Query: 490 KCMGKCRDGPNVRIVNECNPDLAENLDGPVRPQTNPLCIGVGLEDVGVIVANFLGQERQD 311
           KCMGKC+  PNVRI N  + ++ + +D  V+  +NPLCIGVGLEDV  IVA FLG++ +D
Sbjct: 273 KCMGKCKTAPNVRIQNSVDLNMVQGIDDSVKIPSNPLCIGVGLEDVDTIVARFLGEDYKD 332

Query: 310 LGLMVA 293
           +G++ A
Sbjct: 333 VGMVAA 338


>ref|XP_002314335.1| predicted protein [Populus trichocarpa] gi|222863375|gb|EEF00506.1|
           predicted protein [Populus trichocarpa]
          Length = 237

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 40/58 (68%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
 Frame = -3

Query: 490 KCMGKCRDGPNVRIVNECNPDLAENLDGPVR-PQTNPLCIGVGLEDVGVIVANFLGQE 320
           KCMGKCRDGPNVRI+   N    E +D  VR P  NPLCIGVGLEDV VIVANF G+E
Sbjct: 177 KCMGKCRDGPNVRILKSGN----EGVDDSVRIPAANPLCIGVGLEDVDVIVANFFGKE 230


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