BLASTX nr result
ID: Coptis23_contig00008359
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00008359 (273 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002509573.1| nucleotide-binding protein, putative [Ricinu... 49 9e-08 gb|AAN86569.1| nucleotide binding protein [Cypripedium parviflor... 53 4e-07 ref|XP_003550269.1| PREDICTED: cytosolic Fe-S cluster assembly f... 52 5e-07 ref|XP_003544534.1| PREDICTED: cytosolic Fe-S cluster assembly f... 52 5e-07 gb|ACU23930.1| unknown [Glycine max] 52 5e-07 >ref|XP_002509573.1| nucleotide-binding protein, putative [Ricinus communis] gi|223549472|gb|EEF50960.1| nucleotide-binding protein, putative [Ricinus communis] Length = 347 Score = 48.9 bits (115), Expect(3) = 9e-08 Identities = 18/22 (81%), Positives = 22/22 (100%) Frame = +3 Query: 153 DCPGPQSESAGKSDSCEGCPNQ 218 +CPGPQSE+AGKSD+C+GCPNQ Sbjct: 13 NCPGPQSETAGKSDACQGCPNQ 34 Score = 26.6 bits (57), Expect(3) = 9e-08 Identities = 14/21 (66%), Positives = 16/21 (76%), Gaps = 4/21 (19%) Frame = +1 Query: 223 SPKG----LVEIADRMATVKH 273 +PKG LV IA+RMATVKH Sbjct: 40 APKGPDPDLVAIAERMATVKH 60 Score = 24.6 bits (52), Expect(3) = 9e-08 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = +2 Query: 59 MENGNEIPEDANE 97 MENG EIPEDANE Sbjct: 1 MENG-EIPEDANE 12 >gb|AAN86569.1| nucleotide binding protein [Cypripedium parviflorum var. pubescens] Length = 352 Score = 53.1 bits (126), Expect(2) = 4e-07 Identities = 21/23 (91%), Positives = 22/23 (95%) Frame = +3 Query: 156 CPGPQSESAGKSDSCEGCPNQNV 224 CPGPQSESAGKSDSCEGCPNQ + Sbjct: 16 CPGPQSESAGKSDSCEGCPNQQI 38 Score = 25.8 bits (55), Expect(2) = 4e-07 Identities = 13/21 (61%), Positives = 16/21 (76%), Gaps = 4/21 (19%) Frame = +1 Query: 223 SPKG----LVEIADRMATVKH 273 +PKG LV IA+RMAT+KH Sbjct: 42 APKGPDPDLVGIAERMATIKH 62 >ref|XP_003550269.1| PREDICTED: cytosolic Fe-S cluster assembly factor NUBP1 homolog [Glycine max] Length = 355 Score = 52.0 bits (123), Expect(2) = 5e-07 Identities = 20/23 (86%), Positives = 22/23 (95%) Frame = +3 Query: 156 CPGPQSESAGKSDSCEGCPNQNV 224 CPGPQSESAGKSD+CEGCPNQ + Sbjct: 14 CPGPQSESAGKSDACEGCPNQQI 36 Score = 26.6 bits (57), Expect(2) = 5e-07 Identities = 14/21 (66%), Positives = 16/21 (76%), Gaps = 4/21 (19%) Frame = +1 Query: 223 SPKG----LVEIADRMATVKH 273 +PKG LV IA+RMATVKH Sbjct: 40 APKGPDPDLVAIAERMATVKH 60 >ref|XP_003544534.1| PREDICTED: cytosolic Fe-S cluster assembly factor nubp1-A-like [Glycine max] Length = 355 Score = 52.0 bits (123), Expect(2) = 5e-07 Identities = 20/23 (86%), Positives = 22/23 (95%) Frame = +3 Query: 156 CPGPQSESAGKSDSCEGCPNQNV 224 CPGPQSESAGKSD+CEGCPNQ + Sbjct: 14 CPGPQSESAGKSDACEGCPNQQI 36 Score = 26.6 bits (57), Expect(2) = 5e-07 Identities = 14/21 (66%), Positives = 16/21 (76%), Gaps = 4/21 (19%) Frame = +1 Query: 223 SPKG----LVEIADRMATVKH 273 +PKG LV IA+RMATVKH Sbjct: 40 APKGPDPDLVAIAERMATVKH 60 >gb|ACU23930.1| unknown [Glycine max] Length = 355 Score = 52.0 bits (123), Expect(2) = 5e-07 Identities = 20/23 (86%), Positives = 22/23 (95%) Frame = +3 Query: 156 CPGPQSESAGKSDSCEGCPNQNV 224 CPGPQSESAGKSD+CEGCPNQ + Sbjct: 14 CPGPQSESAGKSDACEGCPNQQI 36 Score = 26.6 bits (57), Expect(2) = 5e-07 Identities = 14/21 (66%), Positives = 16/21 (76%), Gaps = 4/21 (19%) Frame = +1 Query: 223 SPKG----LVEIADRMATVKH 273 +PKG LV IA+RMATVKH Sbjct: 40 APKGPDPDLVAIAERMATVKH 60