BLASTX nr result

ID: Coptis23_contig00008359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008359
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509573.1| nucleotide-binding protein, putative [Ricinu...    49   9e-08
gb|AAN86569.1| nucleotide binding protein [Cypripedium parviflor...    53   4e-07
ref|XP_003550269.1| PREDICTED: cytosolic Fe-S cluster assembly f...    52   5e-07
ref|XP_003544534.1| PREDICTED: cytosolic Fe-S cluster assembly f...    52   5e-07
gb|ACU23930.1| unknown [Glycine max]                                   52   5e-07

>ref|XP_002509573.1| nucleotide-binding protein, putative [Ricinus communis]
           gi|223549472|gb|EEF50960.1| nucleotide-binding protein,
           putative [Ricinus communis]
          Length = 347

 Score = 48.9 bits (115), Expect(3) = 9e-08
 Identities = 18/22 (81%), Positives = 22/22 (100%)
 Frame = +3

Query: 153 DCPGPQSESAGKSDSCEGCPNQ 218
           +CPGPQSE+AGKSD+C+GCPNQ
Sbjct: 13  NCPGPQSETAGKSDACQGCPNQ 34



 Score = 26.6 bits (57), Expect(3) = 9e-08
 Identities = 14/21 (66%), Positives = 16/21 (76%), Gaps = 4/21 (19%)
 Frame = +1

Query: 223 SPKG----LVEIADRMATVKH 273
           +PKG    LV IA+RMATVKH
Sbjct: 40  APKGPDPDLVAIAERMATVKH 60



 Score = 24.6 bits (52), Expect(3) = 9e-08
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +2

Query: 59 MENGNEIPEDANE 97
          MENG EIPEDANE
Sbjct: 1  MENG-EIPEDANE 12


>gb|AAN86569.1| nucleotide binding protein [Cypripedium parviflorum var. pubescens]
          Length = 352

 Score = 53.1 bits (126), Expect(2) = 4e-07
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = +3

Query: 156 CPGPQSESAGKSDSCEGCPNQNV 224
           CPGPQSESAGKSDSCEGCPNQ +
Sbjct: 16  CPGPQSESAGKSDSCEGCPNQQI 38



 Score = 25.8 bits (55), Expect(2) = 4e-07
 Identities = 13/21 (61%), Positives = 16/21 (76%), Gaps = 4/21 (19%)
 Frame = +1

Query: 223 SPKG----LVEIADRMATVKH 273
           +PKG    LV IA+RMAT+KH
Sbjct: 42  APKGPDPDLVGIAERMATIKH 62


>ref|XP_003550269.1| PREDICTED: cytosolic Fe-S cluster assembly factor NUBP1 homolog
           [Glycine max]
          Length = 355

 Score = 52.0 bits (123), Expect(2) = 5e-07
 Identities = 20/23 (86%), Positives = 22/23 (95%)
 Frame = +3

Query: 156 CPGPQSESAGKSDSCEGCPNQNV 224
           CPGPQSESAGKSD+CEGCPNQ +
Sbjct: 14  CPGPQSESAGKSDACEGCPNQQI 36



 Score = 26.6 bits (57), Expect(2) = 5e-07
 Identities = 14/21 (66%), Positives = 16/21 (76%), Gaps = 4/21 (19%)
 Frame = +1

Query: 223 SPKG----LVEIADRMATVKH 273
           +PKG    LV IA+RMATVKH
Sbjct: 40  APKGPDPDLVAIAERMATVKH 60


>ref|XP_003544534.1| PREDICTED: cytosolic Fe-S cluster assembly factor nubp1-A-like
           [Glycine max]
          Length = 355

 Score = 52.0 bits (123), Expect(2) = 5e-07
 Identities = 20/23 (86%), Positives = 22/23 (95%)
 Frame = +3

Query: 156 CPGPQSESAGKSDSCEGCPNQNV 224
           CPGPQSESAGKSD+CEGCPNQ +
Sbjct: 14  CPGPQSESAGKSDACEGCPNQQI 36



 Score = 26.6 bits (57), Expect(2) = 5e-07
 Identities = 14/21 (66%), Positives = 16/21 (76%), Gaps = 4/21 (19%)
 Frame = +1

Query: 223 SPKG----LVEIADRMATVKH 273
           +PKG    LV IA+RMATVKH
Sbjct: 40  APKGPDPDLVAIAERMATVKH 60


>gb|ACU23930.1| unknown [Glycine max]
          Length = 355

 Score = 52.0 bits (123), Expect(2) = 5e-07
 Identities = 20/23 (86%), Positives = 22/23 (95%)
 Frame = +3

Query: 156 CPGPQSESAGKSDSCEGCPNQNV 224
           CPGPQSESAGKSD+CEGCPNQ +
Sbjct: 14  CPGPQSESAGKSDACEGCPNQQI 36



 Score = 26.6 bits (57), Expect(2) = 5e-07
 Identities = 14/21 (66%), Positives = 16/21 (76%), Gaps = 4/21 (19%)
 Frame = +1

Query: 223 SPKG----LVEIADRMATVKH 273
           +PKG    LV IA+RMATVKH
Sbjct: 40  APKGPDPDLVAIAERMATVKH 60


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