BLASTX nr result

ID: Coptis23_contig00008350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008350
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317351.1| multidrug resistance protein ABC transporter...   384   e-105
ref|XP_003633036.1| PREDICTED: ABC transporter C family member 2...   382   e-104
ref|XP_002280819.1| PREDICTED: ABC transporter C family member 2...   382   e-104
ref|XP_002526609.1| mgatp-energized glutathione s-conjugate pump...   381   e-104
ref|XP_002448550.1| hypothetical protein SORBIDRAFT_06g028880 [S...   376   e-102

>ref|XP_002317351.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222860416|gb|EEE97963.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1617

 Score =  384 bits (986), Expect = e-105
 Identities = 195/215 (90%), Positives = 205/215 (95%)
 Frame = -1

Query: 647  KRLDSITRSPVYAQFGEALNGLSSIRAYKAYDRMAKINGDSMDNNVRYTLVNMSANRWLA 468
            KRLDSITRSPVYAQFGEALNGLS+IRAYKAYDRMA ING SMDNNVRYTLVNM ANRWLA
Sbjct: 1075 KRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMASINGKSMDNNVRYTLVNMGANRWLA 1134

Query: 467  IRLETLGGLMIWLTATFAVMQNQRADDQVAFASTMGLLLSYALNITNLLTFVLRLASLAE 288
            IRLETLGG+MIW TATFAVMQN RAD+Q AFASTMGLLLSYALNIT+LLT VLRLASLAE
Sbjct: 1135 IRLETLGGIMIWFTATFAVMQNGRADNQQAFASTMGLLLSYALNITSLLTAVLRLASLAE 1194

Query: 287  NSLNAVERVGTYIELPSEAPGVIESNRPPPGWPSSGLIQFENVVLRYRPELPPVLHGLSF 108
            NSLN+VERVGTYIELPSEAP VIESNRPPPGWPSSG I+FE+VVLRYRPELPPVLHGLSF
Sbjct: 1195 NSLNSVERVGTYIELPSEAPLVIESNRPPPGWPSSGAIKFEDVVLRYRPELPPVLHGLSF 1254

Query: 107  TVSPSEKVGIVGRTGAGKSSMLNALFRIVELERGK 3
            T+ PS+KVGIVGRTGAGKSSMLNALFRIVELERG+
Sbjct: 1255 TIFPSDKVGIVGRTGAGKSSMLNALFRIVELERGR 1289


>ref|XP_003633036.1| PREDICTED: ABC transporter C family member 2 isoform 2 [Vitis
            vinifera]
          Length = 1616

 Score =  382 bits (981), Expect = e-104
 Identities = 193/215 (89%), Positives = 207/215 (96%)
 Frame = -1

Query: 647  KRLDSITRSPVYAQFGEALNGLSSIRAYKAYDRMAKINGDSMDNNVRYTLVNMSANRWLA 468
            KRLDSITRSPVYAQFGEALNGLS+IRAYKAYDRMA ING SMDNN+RYTLVNMS+NRWLA
Sbjct: 1075 KRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGQSMDNNIRYTLVNMSSNRWLA 1134

Query: 467  IRLETLGGLMIWLTATFAVMQNQRADDQVAFASTMGLLLSYALNITNLLTFVLRLASLAE 288
            IRLE LGGLMIWLTATFAVMQN+RA++Q AFASTMGLLLSYALNIT+LLT VLRLASLAE
Sbjct: 1135 IRLEALGGLMIWLTATFAVMQNERAENQQAFASTMGLLLSYALNITSLLTGVLRLASLAE 1194

Query: 287  NSLNAVERVGTYIELPSEAPGVIESNRPPPGWPSSGLIQFENVVLRYRPELPPVLHGLSF 108
            NSLN+VERVG+YIELPSEAP VIESNRPPP WPSSG I+FE+VVLRYRPELPPVLHGLSF
Sbjct: 1195 NSLNSVERVGSYIELPSEAPLVIESNRPPPAWPSSGSIKFEDVVLRYRPELPPVLHGLSF 1254

Query: 107  TVSPSEKVGIVGRTGAGKSSMLNALFRIVELERGK 3
            T+SPS+KVGIVGRTGAGKSSMLNALFRIVELERG+
Sbjct: 1255 TISPSDKVGIVGRTGAGKSSMLNALFRIVELERGR 1289


>ref|XP_002280819.1| PREDICTED: ABC transporter C family member 2 isoform 1 [Vitis
            vinifera] gi|297740795|emb|CBI30977.3| unnamed protein
            product [Vitis vinifera]
          Length = 1623

 Score =  382 bits (981), Expect = e-104
 Identities = 193/215 (89%), Positives = 207/215 (96%)
 Frame = -1

Query: 647  KRLDSITRSPVYAQFGEALNGLSSIRAYKAYDRMAKINGDSMDNNVRYTLVNMSANRWLA 468
            KRLDSITRSPVYAQFGEALNGLS+IRAYKAYDRMA ING SMDNN+RYTLVNMS+NRWLA
Sbjct: 1082 KRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGQSMDNNIRYTLVNMSSNRWLA 1141

Query: 467  IRLETLGGLMIWLTATFAVMQNQRADDQVAFASTMGLLLSYALNITNLLTFVLRLASLAE 288
            IRLE LGGLMIWLTATFAVMQN+RA++Q AFASTMGLLLSYALNIT+LLT VLRLASLAE
Sbjct: 1142 IRLEALGGLMIWLTATFAVMQNERAENQQAFASTMGLLLSYALNITSLLTGVLRLASLAE 1201

Query: 287  NSLNAVERVGTYIELPSEAPGVIESNRPPPGWPSSGLIQFENVVLRYRPELPPVLHGLSF 108
            NSLN+VERVG+YIELPSEAP VIESNRPPP WPSSG I+FE+VVLRYRPELPPVLHGLSF
Sbjct: 1202 NSLNSVERVGSYIELPSEAPLVIESNRPPPAWPSSGSIKFEDVVLRYRPELPPVLHGLSF 1261

Query: 107  TVSPSEKVGIVGRTGAGKSSMLNALFRIVELERGK 3
            T+SPS+KVGIVGRTGAGKSSMLNALFRIVELERG+
Sbjct: 1262 TISPSDKVGIVGRTGAGKSSMLNALFRIVELERGR 1296


>ref|XP_002526609.1| mgatp-energized glutathione s-conjugate pump, putative [Ricinus
            communis] gi|223534049|gb|EEF35768.1| mgatp-energized
            glutathione s-conjugate pump, putative [Ricinus communis]
          Length = 1569

 Score =  381 bits (979), Expect = e-104
 Identities = 193/215 (89%), Positives = 206/215 (95%)
 Frame = -1

Query: 647  KRLDSITRSPVYAQFGEALNGLSSIRAYKAYDRMAKINGDSMDNNVRYTLVNMSANRWLA 468
            KR+DSI+RSPVYAQFGEALNGLS+IRAYKAYDRMA ING SMDNN+R+TLVNMSANRWLA
Sbjct: 1027 KRMDSISRSPVYAQFGEALNGLSTIRAYKAYDRMADINGRSMDNNIRFTLVNMSANRWLA 1086

Query: 467  IRLETLGGLMIWLTATFAVMQNQRADDQVAFASTMGLLLSYALNITNLLTFVLRLASLAE 288
            IRLETLGG+MIWLTATFAVMQN RA++Q AFASTMGLLLSYALNIT LLT VLRLASLAE
Sbjct: 1087 IRLETLGGIMIWLTATFAVMQNGRAENQQAFASTMGLLLSYALNITGLLTGVLRLASLAE 1146

Query: 287  NSLNAVERVGTYIELPSEAPGVIESNRPPPGWPSSGLIQFENVVLRYRPELPPVLHGLSF 108
            NSLNAVERVGTYI+LPSEAP VIE NRPPPGWPSSG I+FE+VVLRYRPELPPVLHGLSF
Sbjct: 1147 NSLNAVERVGTYIDLPSEAPPVIEGNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSF 1206

Query: 107  TVSPSEKVGIVGRTGAGKSSMLNALFRIVELERGK 3
            TVSPS+KVGIVGRTGAGKSSMLNALFRIVELERG+
Sbjct: 1207 TVSPSDKVGIVGRTGAGKSSMLNALFRIVELERGR 1241


>ref|XP_002448550.1| hypothetical protein SORBIDRAFT_06g028880 [Sorghum bicolor]
            gi|241939733|gb|EES12878.1| hypothetical protein
            SORBIDRAFT_06g028880 [Sorghum bicolor]
          Length = 1627

 Score =  376 bits (966), Expect = e-102
 Identities = 189/215 (87%), Positives = 204/215 (94%)
 Frame = -1

Query: 647  KRLDSITRSPVYAQFGEALNGLSSIRAYKAYDRMAKINGDSMDNNVRYTLVNMSANRWLA 468
            KRLDSITRSPVYAQF EALNGLS+IRAYKAYDRMA ING SMDNN+R+TLVNMSANRWLA
Sbjct: 1087 KRLDSITRSPVYAQFSEALNGLSTIRAYKAYDRMANINGRSMDNNIRFTLVNMSANRWLA 1146

Query: 467  IRLETLGGLMIWLTATFAVMQNQRADDQVAFASTMGLLLSYALNITNLLTFVLRLASLAE 288
            IRLETLGG+MIW TATFAVMQNQRA++Q AFASTMGLLL+Y LNITNLLT VLRLASLAE
Sbjct: 1147 IRLETLGGIMIWFTATFAVMQNQRAENQKAFASTMGLLLTYTLNITNLLTAVLRLASLAE 1206

Query: 287  NSLNAVERVGTYIELPSEAPGVIESNRPPPGWPSSGLIQFENVVLRYRPELPPVLHGLSF 108
            NSLNAVERVGTYIELPSEAP VIE +RPPPGWPSSG+I+FE+VVLRYRPELPPVLHG+SF
Sbjct: 1207 NSLNAVERVGTYIELPSEAPPVIEDHRPPPGWPSSGVIKFEDVVLRYRPELPPVLHGISF 1266

Query: 107  TVSPSEKVGIVGRTGAGKSSMLNALFRIVELERGK 3
             ++ SEKVGIVGRTGAGKSSMLNALFRIVELERG+
Sbjct: 1267 LINGSEKVGIVGRTGAGKSSMLNALFRIVELERGR 1301


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