BLASTX nr result

ID: Coptis23_contig00008347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008347
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266878.1| PREDICTED: uncharacterized protein LOC100255...    62   5e-08
emb|CAN66887.1| hypothetical protein VITISV_012135 [Vitis vinifera]    59   5e-07
gb|ADE76082.1| unknown [Picea sitchensis]                              58   7e-07
ref|XP_002331820.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06

>ref|XP_002266878.1| PREDICTED: uncharacterized protein LOC100255280 [Vitis vinifera]
           gi|302143706|emb|CBI22567.3| unnamed protein product
           [Vitis vinifera]
          Length = 673

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/61 (45%), Positives = 40/61 (65%)
 Frame = -1

Query: 183 SRIKANSKNWRNWESAIDMDTSFEAEPKLCMRAVCALYRQHKRQEKPMGQSLHFTSRGFS 4
           SRI+ NS     WE   DM  +F  +P+LCM+AVCALYRQ   +EK + ++++   RGFS
Sbjct: 547 SRIRRNSDKKSKWEFEADMLAAFGKDPELCMKAVCALYRQQTSEEKTVKETIYSNQRGFS 606

Query: 3   K 1
           +
Sbjct: 607 Q 607


>emb|CAN66887.1| hypothetical protein VITISV_012135 [Vitis vinifera]
          Length = 628

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/59 (44%), Positives = 38/59 (64%)
 Frame = -1

Query: 177 IKANSKNWRNWESAIDMDTSFEAEPKLCMRAVCALYRQHKRQEKPMGQSLHFTSRGFSK 1
           I+ NS     WE   DM  +F  +P+LCM+AVCALYRQ   +EK + ++++   RGFS+
Sbjct: 510 IRRNSDKKSKWEFEADMLAAFGKDPELCMKAVCALYRQQTSEEKTVKETIYSNQRGFSQ 568


>gb|ADE76082.1| unknown [Picea sitchensis]
          Length = 125

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/59 (47%), Positives = 35/59 (59%)
 Frame = -1

Query: 177 IKANSKNWRNWESAIDMDTSFEAEPKLCMRAVCALYRQHKRQEKPMGQSLHFTSRGFSK 1
           ++  SK   NWE   DM  +F  +P LCMRA+CALYRQ   +EK    SL+   RGF K
Sbjct: 1   MRRQSKQKLNWEYEADMLAAFAKDPLLCMRAICALYRQQTNEEKRGKSSLYQNRRGFDK 59


>ref|XP_002331820.1| predicted protein [Populus trichocarpa] gi|222875058|gb|EEF12189.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/61 (45%), Positives = 38/61 (62%)
 Frame = -1

Query: 183 SRIKANSKNWRNWESAIDMDTSFEAEPKLCMRAVCALYRQHKRQEKPMGQSLHFTSRGFS 4
           SR + +  +   WE   DM + F  +P+LCM+AVCALYRQ   +EK   ++LH   RGFS
Sbjct: 449 SRFQRSKDHKFKWEFEGDMLSDFGKDPELCMKAVCALYRQQSDEEKLNKETLHGNGRGFS 508

Query: 3   K 1
           K
Sbjct: 509 K 509


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