BLASTX nr result

ID: Coptis23_contig00008343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008343
         (1827 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27184.3| unnamed protein product [Vitis vinifera]              134   8e-29
ref|XP_002276461.1| PREDICTED: protein NAP1-like [Vitis vinifera]     134   8e-29
ref|XP_003556250.1| PREDICTED: protein NAP1-like [Glycine max]        132   4e-28
ref|XP_002523639.1| conserved hypothetical protein [Ricinus comm...   129   2e-27
ref|XP_002881375.1| GRL/NAP1 [Arabidopsis lyrata subsp. lyrata] ...   125   4e-26

>emb|CBI27184.3| unnamed protein product [Vitis vinifera]
          Length = 1392

 Score =  134 bits (337), Expect = 8e-29
 Identities = 72/139 (51%), Positives = 94/139 (67%), Gaps = 6/139 (4%)
 Frame = -3

Query: 976 VAKSRQQFA------SPTSARSREWDKPTRWFEYLTSEMNLPATSSSWKPESSEG*PKEF 815
           +AKSRQ FA      SPT+ RSREWD P+RW EYL  ++  P T+ S +  SS+G  +  
Sbjct: 1   MAKSRQHFANQDASLSPTAGRSREWDGPSRWSEYLNLQVTSPMTARSHRNVSSDGQAQSS 60

Query: 814 GRSQKGLNMHSNIQ*YQLSQMVCLAKMYRLNQILGYANPISHVCSEYFWKAGVIPNHLKI 635
             S KGLNM   +Q  Q+++ + +AKMYRLNQIL + + ++HV SE FWKAGV PN  +I
Sbjct: 61  SGSHKGLNMQYVVQLTQVAEGL-MAKMYRLNQILDFPDSVNHVFSEAFWKAGVFPNCPRI 119

Query: 634 CLLISKNFSEHHSILQLER 578
           C+L+SK F EHH  LQLER
Sbjct: 120 CVLLSKKFPEHHIKLQLER 138


>ref|XP_002276461.1| PREDICTED: protein NAP1-like [Vitis vinifera]
          Length = 1386

 Score =  134 bits (337), Expect = 8e-29
 Identities = 72/139 (51%), Positives = 94/139 (67%), Gaps = 6/139 (4%)
 Frame = -3

Query: 976 VAKSRQQFA------SPTSARSREWDKPTRWFEYLTSEMNLPATSSSWKPESSEG*PKEF 815
           +AKSRQ FA      SPT+ RSREWD P+RW EYL  ++  P T+ S +  SS+G  +  
Sbjct: 1   MAKSRQHFANQDASLSPTAGRSREWDGPSRWSEYLNLQVTSPMTARSHRNVSSDGQAQSS 60

Query: 814 GRSQKGLNMHSNIQ*YQLSQMVCLAKMYRLNQILGYANPISHVCSEYFWKAGVIPNHLKI 635
             S KGLNM   +Q  Q+++ + +AKMYRLNQIL + + ++HV SE FWKAGV PN  +I
Sbjct: 61  SGSHKGLNMQYVVQLTQVAEGL-MAKMYRLNQILDFPDSVNHVFSEAFWKAGVFPNCPRI 119

Query: 634 CLLISKNFSEHHSILQLER 578
           C+L+SK F EHH  LQLER
Sbjct: 120 CVLLSKKFPEHHIKLQLER 138


>ref|XP_003556250.1| PREDICTED: protein NAP1-like [Glycine max]
          Length = 1388

 Score =  132 bits (331), Expect = 4e-28
 Identities = 73/141 (51%), Positives = 98/141 (69%), Gaps = 8/141 (5%)
 Frame = -3

Query: 976 VAKSRQQFA------SPTSARSREWDKPTRWFEYLTSEMNLPATSSSWKPESSEG*PKEF 815
           +AKSRQ+F+      SPT+ARSREWD P+RW +YL  EM  P +SSS +    +G  +  
Sbjct: 1   MAKSRQKFSNQDSSLSPTAARSREWDGPSRWTDYLGPEMASPLSSSSSRNIYHDGQSQGT 60

Query: 814 --GRSQKGLNMHSNIQ*YQLSQMVCLAKMYRLNQILGYANPISHVCSEYFWKAGVIPNHL 641
              +S KG+NM   +Q  ++++ + +AKMYRLNQ+L Y +PI+HV SE FWKAGV PNH 
Sbjct: 61  TPAQSHKGINMQWVVQLTEVAEGL-MAKMYRLNQLLDYPDPINHVFSEGFWKAGVFPNHP 119

Query: 640 KICLLISKNFSEHHSILQLER 578
           +IC+L+SK F EH S LQLER
Sbjct: 120 RICVLLSKKFPEHFSKLQLER 140


>ref|XP_002523639.1| conserved hypothetical protein [Ricinus communis]
           gi|223537091|gb|EEF38725.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 823

 Score =  129 bits (325), Expect = 2e-27
 Identities = 69/139 (49%), Positives = 91/139 (65%), Gaps = 6/139 (4%)
 Frame = -3

Query: 976 VAKSRQQF------ASPTSARSREWDKPTRWFEYLTSEMNLPATSSSWKPESSEG*PKEF 815
           +AKSRQ         SPT ARSREW+ P+RW EYL+ +M  P    + +    +G  +  
Sbjct: 1   MAKSRQDVYVRDASLSPTGARSREWEGPSRWTEYLSPDMTSPMAFRTSRNRGPDGQVQSS 60

Query: 814 GRSQKGLNMHSNIQ*YQLSQMVCLAKMYRLNQILGYANPISHVCSEYFWKAGVIPNHLKI 635
           G S KGLN+   +Q  ++++ + +AKMYRLNQIL Y +P+ HV SE FWKAGV PN+ +I
Sbjct: 61  GGSHKGLNLQWVVQLTEVAEGL-MAKMYRLNQILDYPDPVGHVFSEAFWKAGVFPNYPRI 119

Query: 634 CLLISKNFSEHHSILQLER 578
           CLL+SK F EH S LQLER
Sbjct: 120 CLLLSKRFPEHFSKLQLER 138


>ref|XP_002881375.1| GRL/NAP1 [Arabidopsis lyrata subsp. lyrata]
           gi|297327214|gb|EFH57634.1| GRL/NAP1 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1426

 Score =  125 bits (314), Expect = 4e-26
 Identities = 71/139 (51%), Positives = 91/139 (65%), Gaps = 6/139 (4%)
 Frame = -3

Query: 976 VAKSRQQFAS------PTSARSREWDKPTRWFEYLTSEMNLPATSSSWKPESSEG*PKEF 815
           +AKSRQ + S      PTS RSREW+ P+RW EYL  EM   A+ SS   +  +G  +  
Sbjct: 1   MAKSRQYYPSQDESMSPTSVRSREWEGPSRWTEYLGPEM--AASVSSRSSKQIDGNLQSS 58

Query: 814 GRSQKGLNMHSNIQ*YQLSQMVCLAKMYRLNQILGYANPISHVCSEYFWKAGVIPNHLKI 635
           G S K LN+   +Q  ++++ + +AKMYRLNQIL Y +P+ HV SE FWKAGV PNH +I
Sbjct: 59  GGSTKALNIQWVVQMIEVAEGL-MAKMYRLNQILEYPDPVGHVFSEAFWKAGVFPNHPRI 117

Query: 634 CLLISKNFSEHHSILQLER 578
           C L+SK F EH S LQLER
Sbjct: 118 CTLLSKKFPEHFSKLQLER 136


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