BLASTX nr result

ID: Coptis23_contig00008342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008342
         (1203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320387.1| predicted protein [Populus trichocarpa] gi|2...   248   2e-63
ref|XP_002273337.1| PREDICTED: uncharacterized protein LOC100240...   243   7e-62
ref|XP_004148871.1| PREDICTED: uncharacterized protein LOC101218...   242   1e-61
ref|XP_003554235.1| PREDICTED: uncharacterized protein LOC100775...   238   2e-60
ref|XP_003520553.1| PREDICTED: uncharacterized protein LOC100795...   236   7e-60

>ref|XP_002320387.1| predicted protein [Populus trichocarpa] gi|222861160|gb|EEE98702.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  248 bits (634), Expect = 2e-63
 Identities = 133/224 (59%), Positives = 157/224 (70%), Gaps = 6/224 (2%)
 Frame = +3

Query: 99  STSINTTHLFKF---PATLFIT---RNNSIKLSGFCKREERIPKFIASSNSVDTQTVXXX 260
           STS+  +H+ K    P +  ++     N+ +  G      RI +   ++N VDTQT    
Sbjct: 8   STSLCNSHILKLTSKPTSFRLSLPCNTNTTQYLGCDSLSLRI-RASNNANEVDTQTAKED 66

Query: 261 XXXXXXXXDSQPSTASAAGGSDIEKDLKKVVQKTAATFAPRASTASRNPAVPGSTLYTVF 440
                    +Q S++S+A    I+KDLKKVVQKTAATFAPRASTA++NPAVPG+TLYTVF
Sbjct: 67  QATET---SNQVSSSSSAAPPAIDKDLKKVVQKTAATFAPRASTATKNPAVPGTTLYTVF 123

Query: 441 EVQAYVSMLLGGVLSFNLLFPSNEPDIWRLMGMWSIWMFTIPSLRARDCSKNEKEAXXXX 620
           EVQ YV MLLGG LSFNL+FPSNEPDIWRLMGMWSIWMFTIPSLRARDCSKNEKEA    
Sbjct: 124 EVQGYVCMLLGGALSFNLIFPSNEPDIWRLMGMWSIWMFTIPSLRARDCSKNEKEALNYL 183

Query: 621 XXXXXXXXXXXXXFWKSFSVVWSADTIAFFGMYAWKMGWLQKTD 752
                        FWKSF++VWSADTIAFFGMYAWK+GWLQKT+
Sbjct: 184 FLLVPLLNVTIPFFWKSFALVWSADTIAFFGMYAWKLGWLQKTE 227


>ref|XP_002273337.1| PREDICTED: uncharacterized protein LOC100240873 [Vitis vinifera]
           gi|296086680|emb|CBI32315.3| unnamed protein product
           [Vitis vinifera]
          Length = 215

 Score =  243 bits (620), Expect = 7e-62
 Identities = 119/178 (66%), Positives = 133/178 (74%)
 Frame = +3

Query: 219 ASSNSVDTQTVXXXXXXXXXXXDSQPSTASAAGGSDIEKDLKKVVQKTAATFAPRASTAS 398
           A+SN VDTQTV            +   +  ++    ++KDLKKVVQKTAATFAPRASTA+
Sbjct: 38  ANSNEVDTQTVEERTEEESQNNGASNISTPSSTAPALDKDLKKVVQKTAATFAPRASTAT 97

Query: 399 RNPAVPGSTLYTVFEVQAYVSMLLGGVLSFNLLFPSNEPDIWRLMGMWSIWMFTIPSLRA 578
           +NPAVPG+ LYTVFEVQ Y+SMLLGG LSFN LFPSNEPDIWRLMGMWSIWMFTIPSLRA
Sbjct: 98  KNPAVPGTVLYTVFEVQGYLSMLLGGALSFNFLFPSNEPDIWRLMGMWSIWMFTIPSLRA 157

Query: 579 RDCSKNEKEAXXXXXXXXXXXXXXXXXFWKSFSVVWSADTIAFFGMYAWKMGWLQKTD 752
           RDCSKNEKEA                 FWKSF+VVWSADT+AF GMYAWK+GWLQK D
Sbjct: 158 RDCSKNEKEALNYLFLIIPLLNIMIPFFWKSFAVVWSADTVAFVGMYAWKLGWLQKED 215


>ref|XP_004148871.1| PREDICTED: uncharacterized protein LOC101218251 [Cucumis sativus]
           gi|449491541|ref|XP_004158931.1| PREDICTED:
           uncharacterized protein LOC101231741 [Cucumis sativus]
          Length = 221

 Score =  242 bits (618), Expect = 1e-61
 Identities = 120/178 (67%), Positives = 131/178 (73%)
 Frame = +3

Query: 219 ASSNSVDTQTVXXXXXXXXXXXDSQPSTASAAGGSDIEKDLKKVVQKTAATFAPRASTAS 398
           A+SN + TQ V                   A+    ++KDLKKVVQKTAATFAPRASTAS
Sbjct: 40  ANSNDLQTQAVEEPKEEENGIAAEPQQQTKASSAPALDKDLKKVVQKTAATFAPRASTAS 99

Query: 399 RNPAVPGSTLYTVFEVQAYVSMLLGGVLSFNLLFPSNEPDIWRLMGMWSIWMFTIPSLRA 578
           +NPAVPG+TLYTVFEVQ Y SMLLGGVLSFNLLFPSNEPDIWRLMGMWSIWMFTIPSLRA
Sbjct: 100 KNPAVPGTTLYTVFEVQGYASMLLGGVLSFNLLFPSNEPDIWRLMGMWSIWMFTIPSLRA 159

Query: 579 RDCSKNEKEAXXXXXXXXXXXXXXXXXFWKSFSVVWSADTIAFFGMYAWKMGWLQKTD 752
           RDCSKNEKEA                 F KSF+VVWSADT+AFFGMYAWK+GW Q+TD
Sbjct: 160 RDCSKNEKEALNYLFLLVPLLNVIIPFFLKSFAVVWSADTVAFFGMYAWKLGWFQRTD 217


>ref|XP_003554235.1| PREDICTED: uncharacterized protein LOC100775266 [Glycine max]
          Length = 236

 Score =  238 bits (608), Expect = 2e-60
 Identities = 116/178 (65%), Positives = 133/178 (74%)
 Frame = +3

Query: 219 ASSNSVDTQTVXXXXXXXXXXXDSQPSTASAAGGSDIEKDLKKVVQKTAATFAPRASTAS 398
           A+S+ VDTQTV           ++     ++   S I+K+LKKV QKTAATFAPRASTA+
Sbjct: 59  ATSDEVDTQTVVEELAEEKKVEENTNEDNTSTFSSPIDKELKKVAQKTAATFAPRASTAT 118

Query: 399 RNPAVPGSTLYTVFEVQAYVSMLLGGVLSFNLLFPSNEPDIWRLMGMWSIWMFTIPSLRA 578
           +NPAVPG+ LY+VFEVQ YVSMLLGG LSFNL+FPS+EPDIWRLMGMWSIWMFTIPSLRA
Sbjct: 119 KNPAVPGTVLYSVFEVQGYVSMLLGGALSFNLIFPSDEPDIWRLMGMWSIWMFTIPSLRA 178

Query: 579 RDCSKNEKEAXXXXXXXXXXXXXXXXXFWKSFSVVWSADTIAFFGMYAWKMGWLQKTD 752
           RDCSKNEKEA                 FWKSF+VVWSAD +AF GMYAWK GWLQ+TD
Sbjct: 179 RDCSKNEKEALNYLFLLIPLINVIIPFFWKSFAVVWSADVVAFLGMYAWKFGWLQRTD 236


>ref|XP_003520553.1| PREDICTED: uncharacterized protein LOC100795293 [Glycine max]
          Length = 294

 Score =  236 bits (603), Expect = 7e-60
 Identities = 116/180 (64%), Positives = 136/180 (75%), Gaps = 2/180 (1%)
 Frame = +3

Query: 219 ASSNSVDTQTVXXXXXXXXXXXDS--QPSTASAAGGSDIEKDLKKVVQKTAATFAPRAST 392
           A+S+ VDTQTV           ++  + +T ++   + I+K+LKKV QKTAATFAPRAST
Sbjct: 115 ATSDEVDTQTVVEELSEENKVEENTNEDNTNTSTFSAPIDKELKKVAQKTAATFAPRAST 174

Query: 393 ASRNPAVPGSTLYTVFEVQAYVSMLLGGVLSFNLLFPSNEPDIWRLMGMWSIWMFTIPSL 572
           A++NPAVPG+ LY+VFEVQ YVSMLLGG LSFNL+FPS+EPDIWRLMGMWSIWMFTIPSL
Sbjct: 175 ATKNPAVPGTVLYSVFEVQGYVSMLLGGALSFNLIFPSDEPDIWRLMGMWSIWMFTIPSL 234

Query: 573 RARDCSKNEKEAXXXXXXXXXXXXXXXXXFWKSFSVVWSADTIAFFGMYAWKMGWLQKTD 752
           RARDCSKNEKEA                 FWKSF+VVWSAD +AF GMYAWK GWLQ+TD
Sbjct: 235 RARDCSKNEKEALNYLFLLVPLINVIIPFFWKSFAVVWSADVVAFLGMYAWKFGWLQRTD 294


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