BLASTX nr result

ID: Coptis23_contig00008336 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008336
         (1417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002439080.1| hypothetical protein SORBIDRAFT_10g031220 [S...   479   e-133
ref|NP_001130789.1| uncharacterized protein LOC100191893 [Zea ma...   472   e-131
ref|NP_001058667.1| Os06g0731900 [Oryza sativa Japonica Group] g...   468   e-129
dbj|BAJ99055.1| predicted protein [Hordeum vulgare subsp. vulgar...   467   e-129
gb|ABK25584.1| unknown [Picea sitchensis]                             459   e-127

>ref|XP_002439080.1| hypothetical protein SORBIDRAFT_10g031220 [Sorghum bicolor]
            gi|241917303|gb|EER90447.1| hypothetical protein
            SORBIDRAFT_10g031220 [Sorghum bicolor]
          Length = 380

 Score =  479 bits (1234), Expect = e-133
 Identities = 228/353 (64%), Positives = 269/353 (76%), Gaps = 22/353 (6%)
 Frame = +1

Query: 112  KLQYEHFKIER---------------------RWDYYLGRRRAAGSSLLPRGIVQSTSDL 228
            ++QY+H K++                      RW     R+ A G+  LPRGIVQ  SD+
Sbjct: 28   QIQYQHLKVDLGKAGFASATQENNAIPSRNRIRWGTARTRKAATGADSLPRGIVQRHSDM 87

Query: 229  QLRPLWTSSRPSFLQDDAREKSSALLAVPVGLKQKRNVDTMVKKFLSVNCSILLFHYDGN 408
             LRPLW     S    +     SALLA+ VG+ Q +NVDTM +KFL  N +++LFHYDGN
Sbjct: 88   SLRPLWEDDAAS-THKNKNGDHSALLAMAVGISQIKNVDTMARKFLKENYAVMLFHYDGN 146

Query: 409  VDAWNDLDWSNKAIHILAQNQTKWWFAKRFLHPDVVYIYDYIFLWDEDLGVDNFHPGRFL 588
            VD W  L+WS+KAIHILA NQTKWWFAKRFLHPDV+ IYD+IFLWDEDLGV++F+P R+L
Sbjct: 147  VDGWRHLEWSDKAIHILAHNQTKWWFAKRFLHPDVMAIYDFIFLWDEDLGVESFNPRRYL 206

Query: 589  QTMISEGLEIAQPALDPDLS-EVHHRITIRNKKEKVHRRVYAVQGSLNCSEESTGPPCTG 765
              M+SEGLEI QPALDPDLS ++HHRITIRNK  KVHRR+Y  + S+NCS+ES GPPCTG
Sbjct: 207  DIMVSEGLEITQPALDPDLSTDIHHRITIRNKMTKVHRRIYDNRPSMNCSDESKGPPCTG 266

Query: 766  WIEGMAPVFSREAWRCVWHLIQNDLIHGWGLDMKIGYCAQGDRTEKVGVIDSEYIVHHGV 945
            W+EGMAPVFSR AW+CVWHLIQNDLIHGWGLDMK+GYCAQGDRTEKVGVIDSEY+VH G+
Sbjct: 267  WVEGMAPVFSRAAWKCVWHLIQNDLIHGWGLDMKLGYCAQGDRTEKVGVIDSEYVVHQGI 326

Query: 946  PSLGGVSGNKAPSDRSLDLRTHIRRQSMAELEVFRQRWDQAVREDEGWADPFD 1104
            PSLGG S +     RSLDLRTHIRRQS AELE F++RW++AVREDEGW DPFD
Sbjct: 327  PSLGGPSLSSKTPRRSLDLRTHIRRQSSAELEKFKERWNRAVREDEGWKDPFD 379


>ref|NP_001130789.1| uncharacterized protein LOC100191893 [Zea mays]
            gi|194690118|gb|ACF79143.1| unknown [Zea mays]
            gi|195614762|gb|ACG29211.1| lysine ketoglutarate
            reductase trans-splicing related 1 [Zea mays]
            gi|238010772|gb|ACR36421.1| unknown [Zea mays]
            gi|413935102|gb|AFW69653.1| lysine ketoglutarate
            reductase trans-splicing 1 [Zea mays]
          Length = 372

 Score =  472 bits (1215), Expect = e-131
 Identities = 219/309 (70%), Positives = 254/309 (82%), Gaps = 1/309 (0%)
 Frame = +1

Query: 181  GSSLLPRGIVQSTSDLQLRPLWTSSRPSFLQDDAREKSSALLAVPVGLKQKRNVDTMVKK 360
            G+  LPRGIV   SD+ LRPLW     S    +     SALLA+ VG+ Q +N+DTM +K
Sbjct: 64   GAHSLPRGIVHRHSDMSLRPLWEDDTAS-THKNKNSDYSALLAMAVGISQIKNIDTMARK 122

Query: 361  FLSVNCSILLFHYDGNVDAWNDLDWSNKAIHILAQNQTKWWFAKRFLHPDVVYIYDYIFL 540
            FL  N +++LFHYDGNVD W  L+WS+KAIHILA NQTKWWFAKRFLHPDV+ IYD+IFL
Sbjct: 123  FLKENYAVMLFHYDGNVDGWRHLEWSDKAIHILAHNQTKWWFAKRFLHPDVMAIYDFIFL 182

Query: 541  WDEDLGVDNFHPGRFLQTMISEGLEIAQPALDPDLS-EVHHRITIRNKKEKVHRRVYAVQ 717
            WDEDLGV+NF+P R+L  M+SEGLEI QPALDPDLS ++HHRITIRNK  KVHRR+Y  +
Sbjct: 183  WDEDLGVENFNPRRYLDIMVSEGLEITQPALDPDLSTDIHHRITIRNKMAKVHRRIYDNR 242

Query: 718  GSLNCSEESTGPPCTGWIEGMAPVFSREAWRCVWHLIQNDLIHGWGLDMKIGYCAQGDRT 897
             S+NCS+ES GPPCTGW+EGMAPVFSR AW+CVWHLIQNDLIHGWGLDMK+GYCAQGDRT
Sbjct: 243  PSMNCSDESKGPPCTGWVEGMAPVFSRTAWKCVWHLIQNDLIHGWGLDMKLGYCAQGDRT 302

Query: 898  EKVGVIDSEYIVHHGVPSLGGVSGNKAPSDRSLDLRTHIRRQSMAELEVFRQRWDQAVRE 1077
            EKVGVIDSEY+VH G+PSLGG S +     RSLDLRTHIRRQS AELE F++RW++AVRE
Sbjct: 303  EKVGVIDSEYVVHQGIPSLGGPSLSSKTPRRSLDLRTHIRRQSSAELEKFKERWNRAVRE 362

Query: 1078 DEGWADPFD 1104
            DEGW DPFD
Sbjct: 363  DEGWRDPFD 371


>ref|NP_001058667.1| Os06g0731900 [Oryza sativa Japonica Group]
            gi|54291575|dbj|BAD62499.1| putative lysine ketoglutarate
            reductase trans-splicing related 1 [Oryza sativa Japonica
            Group] gi|113596707|dbj|BAF20581.1| Os06g0731900 [Oryza
            sativa Japonica Group] gi|215693852|dbj|BAG89051.1|
            unnamed protein product [Oryza sativa Japonica Group]
          Length = 360

 Score =  468 bits (1203), Expect = e-129
 Identities = 219/309 (70%), Positives = 255/309 (82%), Gaps = 1/309 (0%)
 Frame = +1

Query: 181  GSSLLPRGIVQSTSDLQLRPLWTSSRPSFLQDDAREKSSALLAVPVGLKQKRNVDTMVKK 360
            G+  LPRGIV S SD+ LRPLW S      ++D     +ALLA+ VG+ Q +NVD M +K
Sbjct: 54   GAEGLPRGIVHSNSDMYLRPLWDSGANPKNKND---NHNALLAMAVGISQMQNVDIMARK 110

Query: 361  FLSVNCSILLFHYDGNVDAWNDLDWSNKAIHILAQNQTKWWFAKRFLHPDVVYIYDYIFL 540
            FL+ N +++LFHYDGNVD W++L+WS+KAIHILA+NQTKWWFAKRFLHPDVV IY +IFL
Sbjct: 111  FLNQNYTVMLFHYDGNVDGWHNLEWSDKAIHILARNQTKWWFAKRFLHPDVVAIYGFIFL 170

Query: 541  WDEDLGVDNFHPGRFLQTMISEGLEIAQPALDPDLS-EVHHRITIRNKKEKVHRRVYAVQ 717
            WDEDLGVDNF P R+L  M+SEGLEI QPALDPDLS ++HHRITIRNK  KVHRR+Y  +
Sbjct: 171  WDEDLGVDNFDPRRYLDIMVSEGLEITQPALDPDLSTDIHHRITIRNKMMKVHRRIYDNR 230

Query: 718  GSLNCSEESTGPPCTGWIEGMAPVFSREAWRCVWHLIQNDLIHGWGLDMKIGYCAQGDRT 897
             S+NCS+ S GPPCTGW+EGMAPVFSR AWRCVWHLIQNDLIHGWGLDMK+GYCAQGDR 
Sbjct: 231  ASMNCSDGSKGPPCTGWVEGMAPVFSRAAWRCVWHLIQNDLIHGWGLDMKLGYCAQGDRA 290

Query: 898  EKVGVIDSEYIVHHGVPSLGGVSGNKAPSDRSLDLRTHIRRQSMAELEVFRQRWDQAVRE 1077
            EKVGVIDSEY+VH G+PSLGG S +     RSLDLRTHIRRQS AELE F++RW++AVRE
Sbjct: 291  EKVGVIDSEYVVHQGIPSLGGPSLSSKTPRRSLDLRTHIRRQSSAELEKFKERWNRAVRE 350

Query: 1078 DEGWADPFD 1104
            DE W DPFD
Sbjct: 351  DEEWTDPFD 359


>dbj|BAJ99055.1| predicted protein [Hordeum vulgare subsp. vulgare]
            gi|326506814|dbj|BAJ91448.1| predicted protein [Hordeum
            vulgare subsp. vulgare]
          Length = 388

 Score =  467 bits (1201), Expect = e-129
 Identities = 213/312 (68%), Positives = 256/312 (82%), Gaps = 1/312 (0%)
 Frame = +1

Query: 172  RAAGSSLLPRGIVQSTSDLQLRPLWTSSRPSFLQDDAREKSSALLAVPVGLKQKRNVDTM 351
            R  G+  LPRGIV+++SD+ LRPLW S+       +  ++  ALLA+ VG+ Q +NVD M
Sbjct: 76   RRTGAEGLPRGIVETSSDMFLRPLWDSTAKHASAKNKHDQHKALLAMAVGISQMQNVDIM 135

Query: 352  VKKFLSVNCSILLFHYDGNVDAWNDLDWSNKAIHILAQNQTKWWFAKRFLHPDVVYIYDY 531
             +KFL+ + +++LFHYDGNVD W  L+WS+KAIHILA NQTKWWFAKRFLHP VV IYD+
Sbjct: 136  ARKFLNESYTVMLFHYDGNVDGWRSLEWSDKAIHILAPNQTKWWFAKRFLHPSVVAIYDF 195

Query: 532  IFLWDEDLGVDNFHPGRFLQTMISEGLEIAQPALDPDLS-EVHHRITIRNKKEKVHRRVY 708
            IFLWDEDLGV+NF P R++  M+SEGLEI QPALDPDLS ++HHRITIRNK  KVHRRVY
Sbjct: 196  IFLWDEDLGVENFDPRRYIDIMVSEGLEITQPALDPDLSTDIHHRITIRNKLTKVHRRVY 255

Query: 709  AVQGSLNCSEESTGPPCTGWIEGMAPVFSREAWRCVWHLIQNDLIHGWGLDMKIGYCAQG 888
              + S+NCS++S GPPCTGW+EGMAPVFSR AW+CVWHLIQNDLIHGWGLDMK+GYCAQG
Sbjct: 256  DNRSSMNCSDDSRGPPCTGWVEGMAPVFSRAAWKCVWHLIQNDLIHGWGLDMKLGYCAQG 315

Query: 889  DRTEKVGVIDSEYIVHHGVPSLGGVSGNKAPSDRSLDLRTHIRRQSMAELEVFRQRWDQA 1068
            DR EKVGVIDSEY+VH G+PSLGG S       RS+DLRTHIRRQS AELE+F++RW++A
Sbjct: 316  DRAEKVGVIDSEYVVHQGIPSLGGPSDTSKLPRRSMDLRTHIRRQSSAELEMFKERWEKA 375

Query: 1069 VREDEGWADPFD 1104
            VRED+ W DPFD
Sbjct: 376  VREDDEWMDPFD 387


>gb|ABK25584.1| unknown [Picea sitchensis]
          Length = 441

 Score =  459 bits (1182), Expect = e-127
 Identities = 219/372 (58%), Positives = 271/372 (72%), Gaps = 14/372 (3%)
 Frame = +1

Query: 40   KQFRMKGSWSXXXXXXXXXXXXXTKLQYEHFKIERRWDY--YLGRRRAAGSSLLPRGIVQ 213
            +Q R +G W                 +Y    ++  W     L      G   LPRGIVQ
Sbjct: 59   EQTRAEGRWQPFDSAKNSNLTASNHRKYLSKNLQEEWRITDQLNTDNKKGIESLPRGIVQ 118

Query: 214  STSDLQLRPLWTSSRPSFLQDDAREKSSALLAVPVGLKQKRNVDTMVKKFLSVNCSILLF 393
             TSDL+L+PLW +SR   ++D  ++  + L+A+ +G+KQK NV+ +V+KFLS N SI+LF
Sbjct: 119  ETSDLELKPLWRNSR---IKDTGKQHRN-LMAMTIGIKQKANVNLIVQKFLSANFSIILF 174

Query: 394  HYDGNVDAWNDLDWSNKAIHILAQNQTKWWFAKRFLHPDVVYIYDYIFLWDEDLGVDNFH 573
            HYDGNVD WNDL+WS K +HI AQNQTKWWFAKRFLHP VV +YDYIF+WDEDLGV+NFH
Sbjct: 175  HYDGNVDGWNDLEWSRKTVHIGAQNQTKWWFAKRFLHPAVVSVYDYIFIWDEDLGVENFH 234

Query: 574  PGRFLQTMISEGLEIAQPALDPDLSEVHHRITIRNKKEKVHRRVYAVQGSLNCSEESTGP 753
            PGR+L+ M +EGLEI+QPALDP  SE+HHRITIRNK  +VHRR+Y ++GS NCS  S GP
Sbjct: 235  PGRYLRIMKAEGLEISQPALDPKSSEIHHRITIRNKTRRVHRRLYNLRGSTNCSATSIGP 294

Query: 754  PCTGWIEGMAPVFSREAWRCVWHLIQNDLIHGWGLDMKIGYCAQGDRTEKVGVIDSEYIV 933
            PCTGW+EGMAPVF+R AW+C WHLIQNDLIHGWG+DMK+GYCAQGD T+ VGVIDSEYIV
Sbjct: 295  PCTGWVEGMAPVFTRAAWQCAWHLIQNDLIHGWGMDMKLGYCAQGDHTKNVGVIDSEYIV 354

Query: 934  HHGVPSLGGVSGNK-----APSDRS-------LDLRTHIRRQSMAELEVFRQRWDQAVRE 1077
            H G+ SLGG S NK     +PS RS       +D R+ IRRQS+AEL +FR+RW +AV E
Sbjct: 355  HQGLQSLGGPSANKSSVAVSPSQRSVTKAASEVDPRSEIRRQSVAELTIFRRRWQRAVEE 414

Query: 1078 DEGWADPFDDFK 1113
            D+ W DPF+D +
Sbjct: 415  DKNWVDPFEDLR 426


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