BLASTX nr result

ID: Coptis23_contig00008335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008335
         (1302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170300.1| PREDICTED: transcription factor MYB1R1-like ...   384   e-104
ref|XP_002274350.1| PREDICTED: transcription factor MYB1R1 [Viti...   384   e-104
gb|AAB32591.2| MybSt1 [Solanum tuberosum]                             384   e-104
ref|XP_002304291.1| predicted protein [Populus trichocarpa] gi|2...   381   e-103
ref|XP_002326659.1| predicted protein [Populus trichocarpa] gi|2...   380   e-103

>ref|XP_004170300.1| PREDICTED: transcription factor MYB1R1-like [Cucumis sativus]
          Length = 335

 Score =  384 bits (987), Expect = e-104
 Identities = 207/349 (59%), Positives = 230/349 (65%), Gaps = 1/349 (0%)
 Frame = -1

Query: 1227 MTRRCSHCSNNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLSHYXXXXXXXXXXXXX 1048
            MTRRCSHCS+NGHNSRTCPNR VKLFGVRLTDGSIRKSASMGNL+HY             
Sbjct: 1    MTRRCSHCSHNGHNSRTCPNRVVKLFGVRLTDGSIRKSASMGNLNHYAGSGSGALQSGSN 60

Query: 1047 XXXXXXXXXXXXXSPGDTPEHGVGGDDGGYASEDFVKGSSSSCRERKKGVPWTEEEHRMF 868
                          PG+TPEHGV  D  GYASEDFV GSSSSCRERKKGVPWTEEEHRMF
Sbjct: 61   NPAS----------PGETPEHGVAAD--GYASEDFVPGSSSSCRERKKGVPWTEEEHRMF 108

Query: 867  LLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKHFIRQTNMSRRKRRSSLFDITADEQV 688
            LLGLQKLGKGDWRGIARNYV+SRTPTQVASHAQK+FIRQTN+SRRKRRSSLFDI ADE+V
Sbjct: 109  LLGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKYFIRQTNVSRRKRRSSLFDIVADERV 168

Query: 687  DTPQVLAQDLFPISHLQAETPGNPSLAATP-AIDEECESMDSTNSNDGEAGLPNPESSQC 511
            +   ++ QD    +   AE+  N  L   P  +DEECESMDSTNSNDGE     P+  QC
Sbjct: 169  EN-SIVQQDFLSANSSHAESQSNNPLPTPPTTVDEECESMDSTNSNDGETAPAEPDGPQC 227

Query: 510  SYXXXXXXXXXXXXXXXXXXXPGYTTEPMIQEAHEVVKPTAVHSKSPINVDELVGMSKXX 331
             Y                    GY+ E   +E HEV+KPTAVHSKSP+NVDEL+GMSK  
Sbjct: 228  CYPVVYPAYVAPFFPFSIPFYSGYSAETTNKETHEVLKPTAVHSKSPLNVDELIGMSKLS 287

Query: 330  XXXXXXXXXXXXXXSRKLVEGTARQSAFHVNPXXXXXXXXXXXXTIHAV 184
                            KL+EG++R+SAFH NP             IHAV
Sbjct: 288  LGESIGHSGPSSLSL-KLLEGSSRRSAFHANPASGSENMSSGGSPIHAV 335


>ref|XP_002274350.1| PREDICTED: transcription factor MYB1R1 [Vitis vinifera]
          Length = 335

 Score =  384 bits (986), Expect = e-104
 Identities = 213/348 (61%), Positives = 231/348 (66%)
 Frame = -1

Query: 1227 MTRRCSHCSNNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLSHYXXXXXXXXXXXXX 1048
            MTRRCSHCS+NGHNSRTCPNRGVK+FGVRLTDG IRKSASMGNLSHY             
Sbjct: 1    MTRRCSHCSHNGHNSRTCPNRGVKIFGVRLTDGLIRKSASMGNLSHYAGSTSGHHQNGVS 60

Query: 1047 XXXXXXXXXXXXXSPGDTPEHGVGGDDGGYASEDFVKGSSSSCRERKKGVPWTEEEHRMF 868
                          PG+TPEHG   D  GYASE FV GSSSS RERKKG PWTEEEHRMF
Sbjct: 61   GNNSVS--------PGETPEHGAAAD--GYASEGFVPGSSSS-RERKKGTPWTEEEHRMF 109

Query: 867  LLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKHFIRQTNMSRRKRRSSLFDITADEQV 688
            LLGLQKLGKGDWRGI+RNYVISRTPTQVASHAQK+FIRQTN+SRRKRRSSLFDI ADE V
Sbjct: 110  LLGLQKLGKGDWRGISRNYVISRTPTQVASHAQKYFIRQTNVSRRKRRSSLFDIVADESV 169

Query: 687  DTPQVLAQDLFPISHLQAETPGNPSLAATPAIDEECESMDSTNSNDGEAGLPNPESSQCS 508
            DTP V ++D F  +  QAET  N  L   PA+DEECESMDSTNSNDGE  +P P+  Q  
Sbjct: 170  DTPMV-SRDFFSTNPSQAETLSNNPLPVPPALDEECESMDSTNSNDGEPPIPKPDGLQGC 228

Query: 507  YXXXXXXXXXXXXXXXXXXXPGYTTEPMIQEAHEVVKPTAVHSKSPINVDELVGMSKXXX 328
                                PG ++EP   E HEV+KPTAVHSKSPINVDELVGMSK   
Sbjct: 229  PPVIYPTYFSPFFPFSFPFWPGNSSEPTKMETHEVLKPTAVHSKSPINVDELVGMSKLSL 288

Query: 327  XXXXXXXXXXXXXSRKLVEGTARQSAFHVNPXXXXXXXXXXXXTIHAV 184
                           KL+EG++RQSAFH NP             IHAV
Sbjct: 289  GESIGHAGPSSLTL-KLLEGSSRQSAFHANPASGSSSMNSSGSPIHAV 335


>gb|AAB32591.2| MybSt1 [Solanum tuberosum]
          Length = 342

 Score =  384 bits (986), Expect = e-104
 Identities = 218/353 (61%), Positives = 230/353 (65%), Gaps = 5/353 (1%)
 Frame = -1

Query: 1227 MTRRCSHCSNNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLSHYXXXXXXXXXXXXX 1048
            MTRRCSHCS NGHNSRTCPNRGVKLFGVRLTDG IRKSASMGNL+H+             
Sbjct: 1    MTRRCSHCSTNGHNSRTCPNRGVKLFGVRLTDGLIRKSASMGNLTHFASGSGGGSTPLNG 60

Query: 1047 XXXXXXXXXXXXXSPGDTPEHGV--GGDDGGYASEDFVKGSSSSCRERKKGVPWTEEEHR 874
                          PGDTP+H    GG   GYASEDFV GSSSS RERKKGVPWTEEEHR
Sbjct: 61   VVHDS---------PGDTPDHPAVGGGSADGYASEDFVAGSSSS-RERKKGVPWTEEEHR 110

Query: 873  MFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKHFIRQTNMSRRKRRSSLFDITADE 694
            MFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQK+FIRQ+NMSRRKRRSSLFDI ADE
Sbjct: 111  MFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKYFIRQSNMSRRKRRSSLFDIVADE 170

Query: 693  QVDTPQVLAQDLFPISHLQAETPGNPSLAATPAIDEECESMD---STNSNDGEAGLPNPE 523
              DTP V ++D       QAE   N  L  TPA+DEECESM    S NS DGE  LP PE
Sbjct: 171  SGDTPMV-SRDFLADDPAQAEMQSNNLLPPTPAVDEECESMGSAASANSIDGEHALPIPE 229

Query: 522  SSQCSYXXXXXXXXXXXXXXXXXXXPGYTTEPMIQEAHEVVKPTAVHSKSPINVDELVGM 343
            SSQ  +                   PGYT EP I E HEV+KP AVHSKSPINVDELVGM
Sbjct: 230  SSQYQHPLVYPAYVAPFYPMPYPCWPGYTAEPAIAETHEVLKPIAVHSKSPINVDELVGM 289

Query: 342  SKXXXXXXXXXXXXXXXXSRKLVEGTARQSAFHVNPXXXXXXXXXXXXTIHAV 184
            SK                S KLVEG++RQSAFH NP             IHAV
Sbjct: 290  SKLSLGESIGDAAKPPSLSLKLVEGSSRQSAFHANPSSGSSGMNSSHNPIHAV 342


>ref|XP_002304291.1| predicted protein [Populus trichocarpa] gi|222841723|gb|EEE79270.1|
            predicted protein [Populus trichocarpa]
          Length = 336

 Score =  381 bits (979), Expect = e-103
 Identities = 213/351 (60%), Positives = 229/351 (65%), Gaps = 3/351 (0%)
 Frame = -1

Query: 1227 MTRRCSHCSNNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLSHYXXXXXXXXXXXXX 1048
            MTRRCSHCS+NGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLSHY             
Sbjct: 1    MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLSHYTGSSNVGGPLTSG 60

Query: 1047 XXXXXXXXXXXXXSPGDTPEHGVGGDDGGYASEDFVKGSSSSCRERKKGVPWTEEEHRMF 868
                          PGDTP+HG+     GYASEDFV GSSSS RERKKGVPWTEEEHRMF
Sbjct: 61   PNNPGS--------PGDTPDHGIAAAAAGYASEDFVPGSSSS-RERKKGVPWTEEEHRMF 111

Query: 867  LLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKHFIRQTNMSRRKRRSSLFDITADEQV 688
            LLGLQKLGKGDWRGIARNYVISRTPTQVASHAQK+FIRQ+N+SRRKRRSSLFDI ADE  
Sbjct: 112  LLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDIVADEPG 171

Query: 687  DTPQVLAQDLFPI---SHLQAETPGNPSLAATPAIDEECESMDSTNSNDGEAGLPNPESS 517
            DTP      L  I   S  Q+E P        P +DEECESMDSTNSNDGE   P P+ S
Sbjct: 172  DTPMESQDFLSTIEQESEAQSENP-----VPVPPLDEECESMDSTNSNDGEPPPPKPDCS 226

Query: 516  QCSYXXXXXXXXXXXXXXXXXXXPGYTTEPMIQEAHEVVKPTAVHSKSPINVDELVGMSK 337
            Q +Y                    G++ EP   E HEV+KPTAVHSKSPINVDELVGMSK
Sbjct: 227  QSAYPVVYPSYFSPFFPFSFPFWSGHSAEPTKTETHEVLKPTAVHSKSPINVDELVGMSK 286

Query: 336  XXXXXXXXXXXXXXXXSRKLVEGTARQSAFHVNPXXXXXXXXXXXXTIHAV 184
                            S+KL+EG+ RQSAFH NP             IHAV
Sbjct: 287  -LSLGESIGQDGPSSLSQKLLEGSPRQSAFHANPASNSSSMNRSSSPIHAV 336


>ref|XP_002326659.1| predicted protein [Populus trichocarpa] gi|222833981|gb|EEE72458.1|
            predicted protein [Populus trichocarpa]
          Length = 337

 Score =  380 bits (976), Expect = e-103
 Identities = 210/348 (60%), Positives = 230/348 (66%)
 Frame = -1

Query: 1227 MTRRCSHCSNNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLSHYXXXXXXXXXXXXX 1048
            MTRRCSHCS+NGHNSRTCPNR VKLFGVRLTDGSIRKSASMGNLS Y             
Sbjct: 1    MTRRCSHCSHNGHNSRTCPNRVVKLFGVRLTDGSIRKSASMGNLSLYTGSSNMGGPHASG 60

Query: 1047 XXXXXXXXXXXXXSPGDTPEHGVGGDDGGYASEDFVKGSSSSCRERKKGVPWTEEEHRMF 868
                          P DTP+HG      GYASEDFV GSSSS RERKKGVPWTEEEHRMF
Sbjct: 61   SNNPGS--------PSDTPDHGAAAAADGYASEDFVPGSSSS-RERKKGVPWTEEEHRMF 111

Query: 867  LLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKHFIRQTNMSRRKRRSSLFDITADEQV 688
            LLGLQKLGKGDWRGIARNYVISR+PTQVASHAQK+FIRQ+N+SRRKRRSSLFDI ADEQ+
Sbjct: 112  LLGLQKLGKGDWRGIARNYVISRSPTQVASHAQKYFIRQSNVSRRKRRSSLFDIVADEQL 171

Query: 687  DTPQVLAQDLFPISHLQAETPGNPSLAATPAIDEECESMDSTNSNDGEAGLPNPESSQCS 508
            DTP V +QD    +H + +T  +  L A P +DEECESMDSTNSN+GE   P P+SSQ +
Sbjct: 172  DTPMV-SQDFLSTNHPRVDTQTDNPLPAPPPLDEECESMDSTNSNEGEPLPPKPDSSQPA 230

Query: 507  YXXXXXXXXXXXXXXXXXXXPGYTTEPMIQEAHEVVKPTAVHSKSPINVDELVGMSKXXX 328
            Y                    G + EP   E HEV+KPTAVHSKSPINVDELVGMSK   
Sbjct: 231  YPVVYPAYLSPFFPCSFPFWSGCSAEPSKTETHEVLKPTAVHSKSPINVDELVGMSKLSI 290

Query: 327  XXXXXXXXXXXXXSRKLVEGTARQSAFHVNPXXXXXXXXXXXXTIHAV 184
                           KL+EG +RQSAFH NP             IHAV
Sbjct: 291  GESIGDDGSSSLSL-KLLEGPSRQSAFHANPASNSSGINRSSSPIHAV 337


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