BLASTX nr result

ID: Coptis23_contig00008333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008333
         (225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271334.2| PREDICTED: DEAD-box ATP-dependent RNA helica...    72   4e-11
ref|XP_004163548.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    72   6e-11
ref|XP_004135864.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    72   6e-11
sp|Q0E3X4.2|RH35A_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA...    71   8e-11
gb|EEC72494.1| hypothetical protein OsI_05864 [Oryza sativa Indi...    71   8e-11

>ref|XP_002271334.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 35 isoform 1 [Vitis
           vinifera] gi|147861063|emb|CAN78736.1| hypothetical
           protein VITISV_003102 [Vitis vinifera]
           gi|297743544|emb|CBI36411.3| unnamed protein product
           [Vitis vinifera]
          Length = 587

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/42 (80%), Positives = 39/42 (92%)
 Frame = -1

Query: 126 KPSLLFKATQLKRDLPEVTPTQQLVLQEKEMIEHLSDRKTLM 1
           KPSLL KA+QLKRDLPE++P +Q+V QEKEMIEHLSDRKTLM
Sbjct: 47  KPSLLVKASQLKRDLPEISPAEQIVQQEKEMIEHLSDRKTLM 88


>ref|XP_004163548.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Cucumis
           sativus]
          Length = 597

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 34/42 (80%), Positives = 39/42 (92%)
 Frame = -1

Query: 126 KPSLLFKATQLKRDLPEVTPTQQLVLQEKEMIEHLSDRKTLM 1
           KPSLL KA+Q+KRD PEV+PT+Q+V QEKEMIEHLSDRKTLM
Sbjct: 57  KPSLLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLM 98


>ref|XP_004135864.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Cucumis
           sativus]
          Length = 597

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 34/42 (80%), Positives = 39/42 (92%)
 Frame = -1

Query: 126 KPSLLFKATQLKRDLPEVTPTQQLVLQEKEMIEHLSDRKTLM 1
           KPSLL KA+Q+KRD PEV+PT+Q+V QEKEMIEHLSDRKTLM
Sbjct: 57  KPSLLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLM 98


>sp|Q0E3X4.2|RH35A_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 35A
           gi|51535964|dbj|BAD38045.1| putative DEAD-box protein
           abstrakt [Oryza sativa Japonica Group]
          Length = 627

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/42 (83%), Positives = 38/42 (90%)
 Frame = -1

Query: 126 KPSLLFKATQLKRDLPEVTPTQQLVLQEKEMIEHLSDRKTLM 1
           KPSLL KATQLKR  PEVT T+QL++QEKEMIEHLSDRKTLM
Sbjct: 87  KPSLLVKATQLKRAAPEVTHTEQLIMQEKEMIEHLSDRKTLM 128


>gb|EEC72494.1| hypothetical protein OsI_05864 [Oryza sativa Indica Group]
          Length = 513

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/42 (83%), Positives = 38/42 (90%)
 Frame = -1

Query: 126 KPSLLFKATQLKRDLPEVTPTQQLVLQEKEMIEHLSDRKTLM 1
           KPSLL KATQLKR  PEVT T+QL++QEKEMIEHLSDRKTLM
Sbjct: 87  KPSLLVKATQLKRAAPEVTHTEQLIMQEKEMIEHLSDRKTLM 128


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