BLASTX nr result

ID: Coptis23_contig00008323 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008323
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38025.3| unnamed protein product [Vitis vinifera]              243   9e-63
ref|XP_002263493.1| PREDICTED: chromatin structure-remodeling co...   243   9e-63
ref|XP_004148528.1| PREDICTED: BAH and coiled-coil domain-contai...   241   4e-62
ref|XP_004145431.1| PREDICTED: BAH and coiled-coil domain-contai...   233   1e-59
ref|NP_001236094.1| uncharacterized protein LOC100526926 [Glycin...   230   8e-59

>emb|CBI38025.3| unnamed protein product [Vitis vinifera]
          Length = 215

 Score =  243 bits (621), Expect = 9e-63
 Identities = 112/146 (76%), Positives = 128/146 (87%)
 Frame = +3

Query: 33  MARPRLPPKSLDSYTVKSINKTITVGDCVLMRPAENSKLPYVAKIEKIETDTRNQVKVHV 212
           MA+ R P ++LDSYT+KSINKTI  GDCVLMRP+++SK  YVAK+EKIE+D R  VKVHV
Sbjct: 1   MAKARAPRRTLDSYTIKSINKTIRAGDCVLMRPSDSSKPSYVAKVEKIESDGRGSVKVHV 60

Query: 213 RWYYRPEESIGGRRPFHGSKELFLSDHLDIQSADTIEGICVVHSFKSYIKLDAIGTEDYF 392
           RWYYRPEESIGGRR FHGSKE+FLSDH D+QSADTIEG C VH+FKSY KLDA+G +D+F
Sbjct: 61  RWYYRPEESIGGRRQFHGSKEVFLSDHYDVQSADTIEGKCTVHTFKSYTKLDAVGNDDFF 120

Query: 393 SRFEYNSITGAFNPDRVAVFCKCEMP 470
            RFEYNS TGAFNPDRVAV+CKCEMP
Sbjct: 121 CRFEYNSSTGAFNPDRVAVYCKCEMP 146


>ref|XP_002263493.1| PREDICTED: chromatin structure-remodeling complex subunit RSC1-like
           [Vitis vinifera]
          Length = 224

 Score =  243 bits (621), Expect = 9e-63
 Identities = 112/146 (76%), Positives = 128/146 (87%)
 Frame = +3

Query: 33  MARPRLPPKSLDSYTVKSINKTITVGDCVLMRPAENSKLPYVAKIEKIETDTRNQVKVHV 212
           MA+ R P ++LDSYT+KSINKTI  GDCVLMRP+++SK  YVAK+EKIE+D R  VKVHV
Sbjct: 10  MAKARAPRRTLDSYTIKSINKTIRAGDCVLMRPSDSSKPSYVAKVEKIESDGRGSVKVHV 69

Query: 213 RWYYRPEESIGGRRPFHGSKELFLSDHLDIQSADTIEGICVVHSFKSYIKLDAIGTEDYF 392
           RWYYRPEESIGGRR FHGSKE+FLSDH D+QSADTIEG C VH+FKSY KLDA+G +D+F
Sbjct: 70  RWYYRPEESIGGRRQFHGSKEVFLSDHYDVQSADTIEGKCTVHTFKSYTKLDAVGNDDFF 129

Query: 393 SRFEYNSITGAFNPDRVAVFCKCEMP 470
            RFEYNS TGAFNPDRVAV+CKCEMP
Sbjct: 130 CRFEYNSSTGAFNPDRVAVYCKCEMP 155


>ref|XP_004148528.1| PREDICTED: BAH and coiled-coil domain-containing protein 1-like
           [Cucumis sativus] gi|449516389|ref|XP_004165229.1|
           PREDICTED: BAH and coiled-coil domain-containing protein
           1-like [Cucumis sativus]
          Length = 216

 Score =  241 bits (615), Expect = 4e-62
 Identities = 114/147 (77%), Positives = 127/147 (86%), Gaps = 1/147 (0%)
 Frame = +3

Query: 33  MARPRLPPKSLDSYTVKSINKTITVGDCVLMRPAENSKLPYVAKIEKIETDTRN-QVKVH 209
           MA+P+ P ++LDSYTVK INKTI  GDCVLMRP+E SK  YVAKIEKIE D+R   VKVH
Sbjct: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVH 60

Query: 210 VRWYYRPEESIGGRRPFHGSKELFLSDHLDIQSADTIEGICVVHSFKSYIKLDAIGTEDY 389
           VRWYYRPEESIGGRR FHGSKELFLSDH D+QSADTIEG C VH+FK+Y KLDA+G +DY
Sbjct: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHTFKNYTKLDAVGNDDY 120

Query: 390 FSRFEYNSITGAFNPDRVAVFCKCEMP 470
           F RF+YNS TGAFNPDRVAV+CKCEMP
Sbjct: 121 FCRFDYNSTTGAFNPDRVAVYCKCEMP 147


>ref|XP_004145431.1| PREDICTED: BAH and coiled-coil domain-containing protein 1-like
           [Cucumis sativus] gi|449487648|ref|XP_004157731.1|
           PREDICTED: BAH and coiled-coil domain-containing protein
           1-like [Cucumis sativus]
          Length = 216

 Score =  233 bits (594), Expect = 1e-59
 Identities = 105/146 (71%), Positives = 122/146 (83%)
 Frame = +3

Query: 33  MARPRLPPKSLDSYTVKSINKTITVGDCVLMRPAENSKLPYVAKIEKIETDTRNQVKVHV 212
           MA+ + P K LDSYT+++ NK +  GDCVLMRP+E SKLPYVA +EKIE D RN +KV V
Sbjct: 1   MAKTKPPKKDLDSYTIRATNKIVRAGDCVLMRPSETSKLPYVALVEKIEADNRNNIKVRV 60

Query: 213 RWYYRPEESIGGRRPFHGSKELFLSDHLDIQSADTIEGICVVHSFKSYIKLDAIGTEDYF 392
           RWYYRPEESIGGRR FHG+KELFLSDH D+QSA TIEG C+VHSFK+Y KLD +G EDY+
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYY 120

Query: 393 SRFEYNSITGAFNPDRVAVFCKCEMP 470
           SRFEY + TGAF PDRVAV+CKCEMP
Sbjct: 121 SRFEYKAATGAFTPDRVAVYCKCEMP 146


>ref|NP_001236094.1| uncharacterized protein LOC100526926 [Glycine max]
           gi|255631163|gb|ACU15947.1| unknown [Glycine max]
          Length = 216

 Score =  230 bits (587), Expect = 8e-59
 Identities = 107/147 (72%), Positives = 126/147 (85%), Gaps = 1/147 (0%)
 Frame = +3

Query: 33  MARPRLPPKSLDSYTVKSINKTITVGDCVLMRPAENSKLPYVAKIEKIETDTR-NQVKVH 209
           MA+P+ P ++L+SY+VK I+KTI  GDCVLMRP++ SK  YVA+IE+IE D R + VK+H
Sbjct: 1   MAKPKAPRRTLESYSVKHISKTIRAGDCVLMRPSDLSKPSYVARIERIEADARGSNVKIH 60

Query: 210 VRWYYRPEESIGGRRPFHGSKELFLSDHLDIQSADTIEGICVVHSFKSYIKLDAIGTEDY 389
           VRWYYRPEESIGGRR FHGSKE+FLSDH D+QSADTIE  C VHSFKSY KLDA+G +D+
Sbjct: 61  VRWYYRPEESIGGRRQFHGSKEVFLSDHFDVQSADTIEAKCTVHSFKSYTKLDAVGNDDF 120

Query: 390 FSRFEYNSITGAFNPDRVAVFCKCEMP 470
           F RFEYNS TGAFNPDRVAV+CKCEMP
Sbjct: 121 FCRFEYNSSTGAFNPDRVAVYCKCEMP 147


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