BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008318
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004563892.1| clp protease proteolytic subunit [Nelumbo lu...   186   1e-45
gb|ABR13326.1| putative ATP-dependent protease proteolytic subun...   186   2e-45
ref|YP_740675.1| clp protease proteolytic subunit [Nandina domes...   185   3e-45
gb|AEX98276.1| ATP-dependent Clp protease proteolytic subunit (c...   183   1e-44
gb|AEZ48943.1| clp protease proteolytic subunit, partial [Trades...   183   1e-44

>ref|YP_004563892.1| clp protease proteolytic subunit [Nelumbo lutea]
           gi|224474160|gb|ACN49349.1| clp protease proteolytic
           subunit [Nelumbo lutea] gi|383286916|gb|AFH01565.1| clp
           protease proteolytic subunit (chloroplast) [Nelumbo
           lutea]
          Length = 202

 Score =  186 bits (473), Expect = 1e-45
 Identities = 86/99 (86%), Positives = 95/99 (95%)
 Frame = +2

Query: 2   NRLYRERLIFLGQAVNSEISNQIIGLMVYLSIEDETKDLYLFINSPGGWITPGVSIYDTM 181
           NRL+RERL+FLGQ V+SEISNQ+IGLMVYLSIED+TKDLYLFINSPGGW+ PG++IYDTM
Sbjct: 24  NRLHRERLLFLGQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGIAIYDTM 83

Query: 182 QFVPPDVHTICMGLAASMGSLILVGGEITKRIAFPHAWR 298
           QFVPPDVHTICMGLAASMGS IL GGEITKR+AFPHAWR
Sbjct: 84  QFVPPDVHTICMGLAASMGSFILAGGEITKRLAFPHAWR 122


>gb|ABR13326.1| putative ATP-dependent protease proteolytic subunit [Prunus dulcis]
          Length = 111

 Score =  186 bits (471), Expect = 2e-45
 Identities = 87/100 (87%), Positives = 95/100 (95%)
 Frame = +2

Query: 2   NRLYRERLIFLGQAVNSEISNQIIGLMVYLSIEDETKDLYLFINSPGGWITPGVSIYDTM 181
           NRLYRERL+FLGQ V+SEISNQ+IGLMVYLSIED+TKDLYLFINSPGGW+ PGV+IYDTM
Sbjct: 12  NRLYRERLLFLGQGVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTM 71

Query: 182 QFVPPDVHTICMGLAASMGSLILVGGEITKRIAFPHAWRQ 301
           QFV PD+ TICMGLAASMGS ILVGGEITKR+AFPHAWRQ
Sbjct: 72  QFVRPDIQTICMGLAASMGSFILVGGEITKRLAFPHAWRQ 111


>ref|YP_740675.1| clp protease proteolytic subunit [Nandina domestica]
           gi|122165937|sp|Q09FT6.1|CLPP_NANDO RecName:
           Full=ATP-dependent Clp protease proteolytic subunit;
           AltName: Full=Endopeptidase Clp
           gi|114054496|gb|ABI49889.1| clp protease proteolytic
           subunit [Nandina domestica]
          Length = 202

 Score =  185 bits (470), Expect = 3e-45
 Identities = 88/97 (90%), Positives = 94/97 (96%)
 Frame = +2

Query: 2   NRLYRERLIFLGQAVNSEISNQIIGLMVYLSIEDETKDLYLFINSPGGWITPGVSIYDTM 181
           NRLYRERL+FLGQ V+SEISNQ+IGLMVYLSIEDETKDLYLFINSPGGW+ PGV+IYDTM
Sbjct: 25  NRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDETKDLYLFINSPGGWVIPGVAIYDTM 84

Query: 182 QFVPPDVHTICMGLAASMGSLILVGGEITKRIAFPHA 292
           QFVPPDVHTICMGLAASMGS ILVGGEITKR+AFPHA
Sbjct: 85  QFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPHA 121


>gb|AEX98276.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
           [Magnolia liliiflora]
          Length = 201

 Score =  183 bits (465), Expect = 1e-44
 Identities = 85/97 (87%), Positives = 94/97 (96%)
 Frame = +2

Query: 2   NRLYRERLIFLGQAVNSEISNQIIGLMVYLSIEDETKDLYLFINSPGGWITPGVSIYDTM 181
           NRLYRERL+FLGQ V+SEISNQ++GLMVYLSIED+T+DLYLFINSPGGW+ PG+SIYDTM
Sbjct: 24  NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDTRDLYLFINSPGGWVIPGISIYDTM 83

Query: 182 QFVPPDVHTICMGLAASMGSLILVGGEITKRIAFPHA 292
           QFVPPDVHTICMGLAASMGS ILVGGEITKR+AFPHA
Sbjct: 84  QFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPHA 120


>gb|AEZ48943.1| clp protease proteolytic subunit, partial [Tradescantia ohiensis]
          Length = 201

 Score =  183 bits (465), Expect = 1e-44
 Identities = 88/104 (84%), Positives = 97/104 (93%)
 Frame = +2

Query: 2   NRLYRERLIFLGQAVNSEISNQIIGLMVYLSIEDETKDLYLFINSPGGWITPGVSIYDTM 181
           NRLYRERL+FLGQ V+SEISNQ++GLMVYLSIED+TKDLYLFINSPGGW+ PG++IYDTM
Sbjct: 24  NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDTKDLYLFINSPGGWVIPGMAIYDTM 83

Query: 182 QFVPPDVHTICMGLAASMGSLILVGGEITKRIAFPHAWRQ*VFY 313
           QFVPPDVHTICMGLAASMGS ILVGGEITKR+AFPHA    VFY
Sbjct: 84  QFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPHAM---VFY 124