BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008315
         (1162 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278480.1| PREDICTED: F-box protein At5g46170 isoform 1...   397   e-108
emb|CAN73778.1| hypothetical protein VITISV_042179 [Vitis vinifera]   395   e-108
ref|XP_002305042.1| f-box family protein [Populus trichocarpa] g...   395   e-107
emb|CBI30928.3| unnamed protein product [Vitis vinifera]              394   e-107
ref|XP_004163869.1| PREDICTED: F-box protein At5g46170-like, par...   392   e-107

>ref|XP_002278480.1| PREDICTED: F-box protein At5g46170 isoform 1 [Vitis vinifera]
            gi|359483890|ref|XP_003633032.1| PREDICTED: F-box protein
            At5g46170 isoform 2 [Vitis vinifera]
          Length = 399

 Score =  397 bits (1021), Expect = e-108
 Identities = 201/244 (82%), Positives = 215/244 (88%), Gaps = 10/244 (4%)
 Frame = -3

Query: 1103 VTHHSPTQVLKNFNEIRSLRIELPSGELGIGDAVLLKWRADFGSSLDNCFILGASSVI-- 930
            VTHHSPTQVLKNFNEIR LRIELPSGELGI D VLLKWRADFGS+LDNC ILGA+SVI  
Sbjct: 156  VTHHSPTQVLKNFNEIRFLRIELPSGELGIEDGVLLKWRADFGSTLDNCVILGAASVICP 215

Query: 929  --------PKENNVTVAVGNSSDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQ 774
                        N    V N  DDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQ
Sbjct: 216  GPTKGSGVQDSGNDAFCVSNGGDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQ 275

Query: 773  PIIAEHQTLNSLVLTDSDGQGMLCMNKDQLEELRVKPLSPSTAAKRTLVPALNMRLWYAP 594
            PIIAEH+TL+SLVLTD+DGQG+LCMN+DQLEELRVKPLS S+A+KRTLVPALNMRLWYAP
Sbjct: 276  PIIAEHKTLDSLVLTDADGQGVLCMNRDQLEELRVKPLSASSASKRTLVPALNMRLWYAP 335

Query: 593  HLELPNGVVLKGATLVAIRPSEQTPVKKDVSDGSWVSTAFEEPYGTAAKLLVKRRTYCLE 414
            HLELP+G+VLKGATLVAIRPSEQ+  KK+VSDGSWVS AFEEPYGTAAK+LVKRRTYCLE
Sbjct: 336  HLELPDGIVLKGATLVAIRPSEQSVTKKEVSDGSWVSAAFEEPYGTAAKMLVKRRTYCLE 395

Query: 413  MNSF 402
            MNSF
Sbjct: 396  MNSF 399


>emb|CAN73778.1| hypothetical protein VITISV_042179 [Vitis vinifera]
          Length = 399

 Score =  395 bits (1016), Expect = e-108
 Identities = 202/244 (82%), Positives = 217/244 (88%), Gaps = 10/244 (4%)
 Frame = -3

Query: 1103 VTHHSPTQVLKNFNEIRSLRIELPSGELGIGDAVLLKWRADFGSSLDNCFILGASSVI-- 930
            VTHHSPTQVLKNFNEIR LRIELPSGELGI D VLLKWRADFGS+LDNC ILGA+SVI  
Sbjct: 156  VTHHSPTQVLKNFNEIRFLRIELPSGELGIEDGVLLKWRADFGSTLDNCVILGAASVICP 215

Query: 929  --PKENNV------TVAVGNSSDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQ 774
               K + V         V N  DDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQ
Sbjct: 216  GPTKGSGVQDSGXDAFCVSNGGDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQ 275

Query: 773  PIIAEHQTLNSLVLTDSDGQGMLCMNKDQLEELRVKPLSPSTAAKRTLVPALNMRLWYAP 594
            PIIAEH+TL+SLVLTD+DGQG+LCMN+DQLEELRVKPLS S+A+KRTLVPALNMRLWYAP
Sbjct: 276  PIIAEHKTLDSLVLTDADGQGVLCMNRDQLEELRVKPLSASSASKRTLVPALNMRLWYAP 335

Query: 593  HLELPNGVVLKGATLVAIRPSEQTPVKKDVSDGSWVSTAFEEPYGTAAKLLVKRRTYCLE 414
            HLELP+G+VLKGATLVAIRPSEQ+  KK+VSDGSWVS AFEEPYGTAAK+LVKRRTYCLE
Sbjct: 336  HLELPDGIVLKGATLVAIRPSEQSVTKKEVSDGSWVSAAFEEPYGTAAKMLVKRRTYCLE 395

Query: 413  MNSF 402
            MNSF
Sbjct: 396  MNSF 399


>ref|XP_002305042.1| f-box family protein [Populus trichocarpa]
            gi|222848006|gb|EEE85553.1| f-box family protein [Populus
            trichocarpa]
          Length = 398

 Score =  395 bits (1014), Expect = e-107
 Identities = 202/259 (77%), Positives = 220/259 (84%), Gaps = 8/259 (3%)
 Frame = -3

Query: 1154 STTASTDDEIXXXXXXGVTHHSPTQVLKNFNEIRSLRIELPSGELGIGDAVLLKWRADFG 975
            S + + DD++       VTHHSPTQVLKNFNEIR LRIELPSGELGI D VLLKWRADFG
Sbjct: 141  SLSVAADDDMELDQAG-VTHHSPTQVLKNFNEIRFLRIELPSGELGIDDGVLLKWRADFG 199

Query: 974  SSLDNCFILGASSVIP--------KENNVTVAVGNSSDDNGSIPESFYTNGGLKLRVVWT 819
            S+LDNC ILGA+SVI         ++ N   A     DDNGSIPESFYTNGGLKLRVVWT
Sbjct: 200  STLDNCVILGAASVITNNKISSAMQQENAAAAAAADDDDNGSIPESFYTNGGLKLRVVWT 259

Query: 818  ISSLIAASARHYLLQPIIAEHQTLNSLVLTDSDGQGMLCMNKDQLEELRVKPLSPSTAAK 639
            ISSLIAASARHYLLQPIIAEH+TL+SLVL D+DGQG+LCMN++QLEELRVKPLS S+A+K
Sbjct: 260  ISSLIAASARHYLLQPIIAEHKTLDSLVLADADGQGVLCMNREQLEELRVKPLSASSASK 319

Query: 638  RTLVPALNMRLWYAPHLELPNGVVLKGATLVAIRPSEQTPVKKDVSDGSWVSTAFEEPYG 459
            RTLVPALNMRLWYAPHLELP+GVVLKGATLVAIRPSEQ   KKDVSD SWVST FEEPYG
Sbjct: 320  RTLVPALNMRLWYAPHLELPDGVVLKGATLVAIRPSEQAATKKDVSDVSWVSTTFEEPYG 379

Query: 458  TAAKLLVKRRTYCLEMNSF 402
            TAAK+LVKRRTYCLEMNSF
Sbjct: 380  TAAKMLVKRRTYCLEMNSF 398


>emb|CBI30928.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score =  394 bits (1012), Expect = e-107
 Identities = 199/234 (85%), Positives = 214/234 (91%)
 Frame = -3

Query: 1103 VTHHSPTQVLKNFNEIRSLRIELPSGELGIGDAVLLKWRADFGSSLDNCFILGASSVIPK 924
            VTHHSPTQVLKNFNEIR LRIELPSGELGI D VLLKWRADFGS+LDNC ILGA+SVI  
Sbjct: 167  VTHHSPTQVLKNFNEIRFLRIELPSGELGIEDGVLLKWRADFGSTLDNCVILGAASVICP 226

Query: 923  ENNVTVAVGNSSDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHQTLN 744
                T   G   +DNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEH+TL+
Sbjct: 227  --GPTKGSGVQDNDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLD 284

Query: 743  SLVLTDSDGQGMLCMNKDQLEELRVKPLSPSTAAKRTLVPALNMRLWYAPHLELPNGVVL 564
            SLVLTD+DGQG+LCMN+DQLEELRVKPLS S+A+KRTLVPALNMRLWYAPHLELP+G+VL
Sbjct: 285  SLVLTDADGQGVLCMNRDQLEELRVKPLSASSASKRTLVPALNMRLWYAPHLELPDGIVL 344

Query: 563  KGATLVAIRPSEQTPVKKDVSDGSWVSTAFEEPYGTAAKLLVKRRTYCLEMNSF 402
            KGATLVAIRPSEQ+  KK+VSDGSWVS AFEEPYGTAAK+LVKRRTYCLEMNSF
Sbjct: 345  KGATLVAIRPSEQSVTKKEVSDGSWVSAAFEEPYGTAAKMLVKRRTYCLEMNSF 398


>ref|XP_004163869.1| PREDICTED: F-box protein At5g46170-like, partial [Cucumis sativus]
          Length = 421

 Score =  392 bits (1008), Expect = e-107
 Identities = 200/245 (81%), Positives = 217/245 (88%), Gaps = 11/245 (4%)
 Frame = -3

Query: 1103 VTHHSPTQVLKNFNEIRSLRIELPSGELGIGDAVLLKWRADFGSSLDNCFILGASSVIP- 927
            VTHHSPTQVLKNFNEIR LRIELPSGELGI D +LLKWRADFGS+LDNC ILGA+SVI  
Sbjct: 177  VTHHSPTQVLKNFNEIRFLRIELPSGELGIDDGILLKWRADFGSTLDNCVILGAASVIHV 236

Query: 926  -------KENNVT---VAVGNSSDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLL 777
                   +EN         G ++DD+GSIPESFYTNGGLKLRVVWTISSLIAASARHYLL
Sbjct: 237  GSFNKHVQENGTDGFCSGNGPAADDSGSIPESFYTNGGLKLRVVWTISSLIAASARHYLL 296

Query: 776  QPIIAEHQTLNSLVLTDSDGQGMLCMNKDQLEELRVKPLSPSTAAKRTLVPALNMRLWYA 597
            QPIIAEH+TL++LVLTD+DGQGMLCMNKDQLEELRVKPLS STA+KRTLVPALNMRLWYA
Sbjct: 297  QPIIAEHKTLDNLVLTDADGQGMLCMNKDQLEELRVKPLSASTASKRTLVPALNMRLWYA 356

Query: 596  PHLELPNGVVLKGATLVAIRPSEQTPVKKDVSDGSWVSTAFEEPYGTAAKLLVKRRTYCL 417
            PHLELP G+VLKGATLVAIRPSEQ+  KK+VSDGSW+S AFEEPYGTAAK+LVKRRTYCL
Sbjct: 357  PHLELPGGIVLKGATLVAIRPSEQSMTKKEVSDGSWLSNAFEEPYGTAAKILVKRRTYCL 416

Query: 416  EMNSF 402
            EMNSF
Sbjct: 417  EMNSF 421