BLASTX nr result

ID: Coptis23_contig00008312 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008312
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70962.1| hypothetical protein VITISV_038267 [Vitis vinifera]   174   8e-55
ref|XP_002282603.1| PREDICTED: probable protein disulfide-isomer...   173   1e-54
ref|XP_002282610.1| PREDICTED: probable protein disulfide-isomer...   173   4e-54
ref|XP_002515309.1| protein disulfide isomerase, putative [Ricin...   166   1e-52
ref|XP_002302750.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-52

>emb|CAN70962.1| hypothetical protein VITISV_038267 [Vitis vinifera]
          Length = 357

 Score =  174 bits (441), Expect(2) = 8e-55
 Identities = 82/90 (91%), Positives = 86/90 (95%)
 Frame = -1

Query: 462 HCKNLAPIYEKVATAYKLEGDVVIANLDADKYKDFAEKYGVSGFPTLKFFPKGNKDGEDY 283
           HCK+LAPIYEKVATA+K EGDVVIANLDADKYKD AEKYGVSG+PTLKFFPKGNK GEDY
Sbjct: 172 HCKSLAPIYEKVATAFKSEGDVVIANLDADKYKDLAEKYGVSGYPTLKFFPKGNKAGEDY 231

Query: 282 DGGRDLEDFVTFINEKSGTSRDGKGQLTSK 193
           DGGRDLEDFVTF+NEK GTSRDGKGQLTSK
Sbjct: 232 DGGRDLEDFVTFVNEKCGTSRDGKGQLTSK 261



 Score = 64.7 bits (156), Expect(2) = 8e-55
 Identities = 32/39 (82%), Positives = 37/39 (94%)
 Frame = -2

Query: 119 GQLTSKAGIVASLDALVKEFVSASNDEKKAVLSKIEEEV 3
           GQLTSKAG VASLD+LVKEF+SAS+DEKKAV ++IEEEV
Sbjct: 256 GQLTSKAGTVASLDSLVKEFISASDDEKKAVFARIEEEV 294



 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 35/80 (43%), Positives = 53/80 (66%)
 Frame = -1

Query: 462 HCKNLAPIYEKVATAYKLEGDVVIANLDADKYKDFAEKYGVSGFPTLKFFPKGNKDGEDY 283
           HCK LAP YEK+  ++K    V+I  +D D++K    KYGVSG+PT+++FPKG+ + + Y
Sbjct: 53  HCKKLAPEYEKLGASFKKAKSVLIGKVDCDEHKSVCSKYGVSGYPTIQWFPKGSLEPKKY 112

Query: 282 DGGRDLEDFVTFINEKSGTS 223
           +G R  E    F+N + GT+
Sbjct: 113 EGARSAEALAEFVNNEGGTN 132


>ref|XP_002282603.1| PREDICTED: probable protein disulfide-isomerase A6 isoform 1 [Vitis
           vinifera] gi|296089758|emb|CBI39577.3| unnamed protein
           product [Vitis vinifera]
          Length = 357

 Score =  173 bits (439), Expect(2) = 1e-54
 Identities = 82/90 (91%), Positives = 86/90 (95%)
 Frame = -1

Query: 462 HCKNLAPIYEKVATAYKLEGDVVIANLDADKYKDFAEKYGVSGFPTLKFFPKGNKDGEDY 283
           HCK+LAPIYEKVATA+K EGDVVIANLDADKYKD AEKYGVSG+PTLKFFPKGNK GEDY
Sbjct: 172 HCKSLAPIYEKVATAFKSEGDVVIANLDADKYKDLAEKYGVSGYPTLKFFPKGNKAGEDY 231

Query: 282 DGGRDLEDFVTFINEKSGTSRDGKGQLTSK 193
           DGGRDLEDFVTFIN+K GTSRDGKGQLTSK
Sbjct: 232 DGGRDLEDFVTFINDKCGTSRDGKGQLTSK 261



 Score = 64.7 bits (156), Expect(2) = 1e-54
 Identities = 32/39 (82%), Positives = 37/39 (94%)
 Frame = -2

Query: 119 GQLTSKAGIVASLDALVKEFVSASNDEKKAVLSKIEEEV 3
           GQLTSKAG VASLD+LVKEF+SAS+DEKKAV ++IEEEV
Sbjct: 256 GQLTSKAGTVASLDSLVKEFISASDDEKKAVFARIEEEV 294



 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 35/80 (43%), Positives = 53/80 (66%)
 Frame = -1

Query: 462 HCKNLAPIYEKVATAYKLEGDVVIANLDADKYKDFAEKYGVSGFPTLKFFPKGNKDGEDY 283
           HCK LAP YEK+  ++K    V+I  +D D++K    KYGVSG+PT+++FPKG+ + + Y
Sbjct: 53  HCKKLAPEYEKLGASFKKAKSVLIGKVDCDEHKSVCSKYGVSGYPTIQWFPKGSLEPKKY 112

Query: 282 DGGRDLEDFVTFINEKSGTS 223
           +G R  E    F+N + GT+
Sbjct: 113 EGARSAEALAEFVNNEGGTN 132


>ref|XP_002282610.1| PREDICTED: probable protein disulfide-isomerase A6 isoform 2 [Vitis
           vinifera]
          Length = 333

 Score =  173 bits (439), Expect(2) = 4e-54
 Identities = 82/90 (91%), Positives = 86/90 (95%)
 Frame = -1

Query: 462 HCKNLAPIYEKVATAYKLEGDVVIANLDADKYKDFAEKYGVSGFPTLKFFPKGNKDGEDY 283
           HCK+LAPIYEKVATA+K EGDVVIANLDADKYKD AEKYGVSG+PTLKFFPKGNK GEDY
Sbjct: 172 HCKSLAPIYEKVATAFKSEGDVVIANLDADKYKDLAEKYGVSGYPTLKFFPKGNKAGEDY 231

Query: 282 DGGRDLEDFVTFINEKSGTSRDGKGQLTSK 193
           DGGRDLEDFVTFIN+K GTSRDGKGQLTSK
Sbjct: 232 DGGRDLEDFVTFINDKCGTSRDGKGQLTSK 261



 Score = 63.2 bits (152), Expect(2) = 4e-54
 Identities = 31/38 (81%), Positives = 36/38 (94%)
 Frame = -2

Query: 119 GQLTSKAGIVASLDALVKEFVSASNDEKKAVLSKIEEE 6
           GQLTSKAG VASLD+LVKEF+SAS+DEKKAV ++IEEE
Sbjct: 256 GQLTSKAGTVASLDSLVKEFISASDDEKKAVFARIEEE 293



 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 35/80 (43%), Positives = 53/80 (66%)
 Frame = -1

Query: 462 HCKNLAPIYEKVATAYKLEGDVVIANLDADKYKDFAEKYGVSGFPTLKFFPKGNKDGEDY 283
           HCK LAP YEK+  ++K    V+I  +D D++K    KYGVSG+PT+++FPKG+ + + Y
Sbjct: 53  HCKKLAPEYEKLGASFKKAKSVLIGKVDCDEHKSVCSKYGVSGYPTIQWFPKGSLEPKKY 112

Query: 282 DGGRDLEDFVTFINEKSGTS 223
           +G R  E    F+N + GT+
Sbjct: 113 EGARSAEALAEFVNNEGGTN 132


>ref|XP_002515309.1| protein disulfide isomerase, putative [Ricinus communis]
           gi|223545789|gb|EEF47293.1| protein disulfide isomerase,
           putative [Ricinus communis]
          Length = 359

 Score =  166 bits (421), Expect(2) = 1e-52
 Identities = 79/90 (87%), Positives = 82/90 (91%)
 Frame = -1

Query: 462 HCKNLAPIYEKVATAYKLEGDVVIANLDADKYKDFAEKYGVSGFPTLKFFPKGNKDGEDY 283
           HCKNLAP YEKVA A+K E DVVIANLDADKY+D  EKYGVSGFPTLKFFPKGNK GEDY
Sbjct: 174 HCKNLAPTYEKVAAAFKSEDDVVIANLDADKYRDIGEKYGVSGFPTLKFFPKGNKAGEDY 233

Query: 282 DGGRDLEDFVTFINEKSGTSRDGKGQLTSK 193
           +GGRDLEDFVTFINEKSGTSRD KGQLTSK
Sbjct: 234 EGGRDLEDFVTFINEKSGTSRDAKGQLTSK 263



 Score = 65.5 bits (158), Expect(2) = 1e-52
 Identities = 33/39 (84%), Positives = 36/39 (92%)
 Frame = -2

Query: 119 GQLTSKAGIVASLDALVKEFVSASNDEKKAVLSKIEEEV 3
           GQLTSKAGIV  LDALVKEFV+ASNDEKKAV S++EEEV
Sbjct: 258 GQLTSKAGIVEPLDALVKEFVAASNDEKKAVFSRLEEEV 296



 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 36/80 (45%), Positives = 54/80 (67%)
 Frame = -1

Query: 462 HCKNLAPIYEKVATAYKLEGDVVIANLDADKYKDFAEKYGVSGFPTLKFFPKGNKDGEDY 283
           HCK LAP YEK+ T++K    V+I  +D D++K    KYGVSG+PT+++FPKG+ + + Y
Sbjct: 55  HCKKLAPEYEKLGTSFKKAKSVLIGKVDCDEHKSLCSKYGVSGYPTVQWFPKGSLEPKKY 114

Query: 282 DGGRDLEDFVTFINEKSGTS 223
           +G R  E    F+N + GT+
Sbjct: 115 EGPRTAESLAEFVNSEGGTN 134


>ref|XP_002302750.1| predicted protein [Populus trichocarpa] gi|222844476|gb|EEE82023.1|
           predicted protein [Populus trichocarpa]
          Length = 359

 Score =  166 bits (420), Expect(2) = 2e-52
 Identities = 77/90 (85%), Positives = 85/90 (94%)
 Frame = -1

Query: 462 HCKNLAPIYEKVATAYKLEGDVVIANLDADKYKDFAEKYGVSGFPTLKFFPKGNKDGEDY 283
           HCKNLAPIYEKVATA+K E DVV+ANL+ADKY+D AEKYGVSGFPTLKFFPKGNK GE+Y
Sbjct: 174 HCKNLAPIYEKVATAFKSEEDVVVANLEADKYRDLAEKYGVSGFPTLKFFPKGNKAGEEY 233

Query: 282 DGGRDLEDFVTFINEKSGTSRDGKGQLTSK 193
           +GGRDL+DFV FINEK+GTSRDGKGQLTSK
Sbjct: 234 EGGRDLDDFVAFINEKAGTSRDGKGQLTSK 263



 Score = 64.7 bits (156), Expect(2) = 2e-52
 Identities = 33/39 (84%), Positives = 36/39 (92%)
 Frame = -2

Query: 119 GQLTSKAGIVASLDALVKEFVSASNDEKKAVLSKIEEEV 3
           GQLTSKAGIV SLDALVKEFV+A +DEKKAV S+IEEEV
Sbjct: 258 GQLTSKAGIVESLDALVKEFVAAGDDEKKAVFSRIEEEV 296



 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 35/80 (43%), Positives = 54/80 (67%)
 Frame = -1

Query: 462 HCKNLAPIYEKVATAYKLEGDVVIANLDADKYKDFAEKYGVSGFPTLKFFPKGNKDGEDY 283
           HCK LAP YEK+ +++K    V+I  +D D++K    KYGVSG+PTL++FPKG+ + + Y
Sbjct: 55  HCKKLAPEYEKLGSSFKKAKAVLIGKVDCDEHKGVCSKYGVSGYPTLQWFPKGSLEPKKY 114

Query: 282 DGGRDLEDFVTFINEKSGTS 223
           +G R  E    F+N + G++
Sbjct: 115 EGPRTAEALAEFVNNEGGSN 134


Top