BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008310
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265232.2| PREDICTED: peroxisomal biogenesis factor 6-l...   128   7e-28
ref|XP_002514945.1| ATP binding protein, putative [Ricinus commu...   119   3e-25
ref|XP_002265580.2| PREDICTED: ATP-dependent zinc metalloproteas...   117   2e-24
emb|CAN69873.1| hypothetical protein VITISV_030608 [Vitis vinifera]   110   2e-22
ref|XP_002312632.1| predicted protein [Populus trichocarpa] gi|2...   108   5e-22

>ref|XP_002265232.2| PREDICTED: peroxisomal biogenesis factor 6-like [Vitis vinifera]
          Length = 543

 Score =  128 bits (322), Expect = 7e-28
 Identities = 63/138 (45%), Positives = 97/138 (70%)
 Frame = -2

Query: 431 RNMFSTTKMPSTSSLFSAYTSVAAFFMLIRAIATEAKSILTQFIPEELQRKILSIFERFY 252
           ++MFS  +MP+TSS+FSAYT+  A  ML++ +  E +++  Q +P++LQ KILS   R  
Sbjct: 51  QSMFSQVRMPATSSVFSAYTTFVASAMLVKTMLHEVQTLAKQLVPQQLQDKILSGIGRLL 110

Query: 251 KKPPSVLTLVINEYNAHMGNELYEASEVYLSTKAASPSLDRLIVSKQQRDKKVTVTVEKD 72
             P S +TLVI+EYN +  N+++EAS++YL TK  SP++ RL VS+  R+K + VT+   
Sbjct: 111 GDPSSQMTLVIDEYNGYTMNQIFEASQIYLQTK-ISPAVSRLRVSRSPREKNLLVTISNG 169

Query: 71  QDIVDVFEHIQLTWKLVS 18
           + ++DVFE IQL W++VS
Sbjct: 170 EKVIDVFEGIQLKWEMVS 187


>ref|XP_002514945.1| ATP binding protein, putative [Ricinus communis]
           gi|223545996|gb|EEF47499.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 503

 Score =  119 bits (299), Expect = 3e-25
 Identities = 61/142 (42%), Positives = 93/142 (65%)
 Frame = -2

Query: 428 NMFSTTKMPSTSSLFSAYTSVAAFFMLIRAIATEAKSILTQFIPEELQRKILSIFERFYK 249
           N+F+   +PST+S+ S YT+ AA  ML+R +  E +++  Q IP++LQ KI++     ++
Sbjct: 3   NIFTMPSIPSTTSVISTYTAFAASSMLVRTVLNEVQTMTAQLIPQKLQDKIMASLGSLFR 62

Query: 248 KPPSVLTLVINEYNAHMGNELYEASEVYLSTKAASPSLDRLIVSKQQRDKKVTVTVEKDQ 69
                LTL+I+EYN    NE+Y+AS+ YLST+  +PS+D+L VSK  R+K  TVT+ K Q
Sbjct: 63  LNSCKLTLIIDEYNGFTINEIYQASQAYLSTR-ITPSVDQLKVSKAPREKNFTVTINKGQ 121

Query: 68  DIVDVFEHIQLTWKLVSLEKES 3
            I D FE IQ+ W+  S E ++
Sbjct: 122 RITDEFEGIQVAWEFSSTETQT 143


>ref|XP_002265580.2| PREDICTED: ATP-dependent zinc metalloprotease FTSH, chloroplastic
           [Vitis vinifera]
          Length = 516

 Score =  117 bits (292), Expect = 2e-24
 Identities = 62/140 (44%), Positives = 93/140 (66%)
 Frame = -2

Query: 425 MFSTTKMPSTSSLFSAYTSVAAFFMLIRAIATEAKSILTQFIPEELQRKILSIFERFYKK 246
           MFS + MPST+S+ S YT+ AA  ML+R + +E +++  Q IP++L+ KI+S        
Sbjct: 1   MFSLSGMPSTASVLSTYTTFAASAMLVRTVVSEVETMANQLIPQQLREKIVSKLGGLLGS 60

Query: 245 PPSVLTLVINEYNAHMGNELYEASEVYLSTKAASPSLDRLIVSKQQRDKKVTVTVEKDQD 66
             S + LVI E+N    N++Y+ASE+YL TK  +PS+ RL VSK  R+K ++VTV K + 
Sbjct: 61  HSSEMVLVIQEFNGLSVNQIYQASELYLRTK-ITPSVGRLNVSKGLREKNLSVTVSKGEM 119

Query: 65  IVDVFEHIQLTWKLVSLEKE 6
           +VDVFE I+L W+L+  E +
Sbjct: 120 VVDVFEGIELRWQLICAETQ 139


>emb|CAN69873.1| hypothetical protein VITISV_030608 [Vitis vinifera]
          Length = 492

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/134 (43%), Positives = 88/134 (65%)
 Frame = -2

Query: 407 MPSTSSLFSAYTSVAAFFMLIRAIATEAKSILTQFIPEELQRKILSIFERFYKKPPSVLT 228
           MPST+ + S YT+ AA  ML+R + +E +++  Q IP++L+ KI+S          S + 
Sbjct: 1   MPSTAXVLSTYTTFAASAMLVRTVVSEVETMANQLIPQQLREKIVSKLGGLLGSHSSEMV 60

Query: 227 LVINEYNAHMGNELYEASEVYLSTKAASPSLDRLIVSKQQRDKKVTVTVEKDQDIVDVFE 48
           LVI E+N    N++Y+ASE+YL TK  +PS+ RL VSK  R+K ++VTV K + +VDVFE
Sbjct: 61  LVIQEFNGLSVNQIYQASELYLRTK-ITPSVGRLNVSKGLREKNLSVTVSKGEMVVDVFE 119

Query: 47  HIQLTWKLVSLEKE 6
            I+L W+L+  E +
Sbjct: 120 GIELRWQLICAETQ 133


>ref|XP_002312632.1| predicted protein [Populus trichocarpa] gi|222852452|gb|EEE89999.1|
           predicted protein [Populus trichocarpa]
          Length = 461

 Score =  108 bits (271), Expect = 5e-22
 Identities = 56/129 (43%), Positives = 84/129 (65%)
 Frame = -2

Query: 392 SLFSAYTSVAAFFMLIRAIATEAKSILTQFIPEELQRKILSIFERFYKKPPSVLTLVINE 213
           S+ S YT+ AA  ML+R++  E ++++ Q IP++LQ +I S   R +    S LTL++NE
Sbjct: 1   SVLSTYTAFAASAMLVRSVFNEVQAVINQLIPQKLQERISSSLGRLFGDDSSRLTLIVNE 60

Query: 212 YNAHMGNELYEASEVYLSTKAASPSLDRLIVSKQQRDKKVTVTVEKDQDIVDVFEHIQLT 33
           YN    NE+YEASEVYLST+  + S+ +L V K   +K ++VT+ K Q I+D FE I+L 
Sbjct: 61  YNGFSINEMYEASEVYLSTR-VTRSIGQLKVFKDPGNKGLSVTINKGQQIIDTFEGIELA 119

Query: 32  WKLVSLEKE 6
           W+  S E +
Sbjct: 120 WEFASTETQ 128