BLASTX nr result

ID: Coptis23_contig00008303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008303
         (1628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65189.1| hypothetical protein VITISV_032100 [Vitis vinifera]   405   e-110
ref|XP_002266905.1| PREDICTED: uncharacterized protein LOC100247...   404   e-110
ref|XP_002518846.1| electron transporter, putative [Ricinus comm...   369   1e-99
ref|XP_002303660.1| hypothetical protein POPTRDRAFT_554508 [Popu...   363   5e-98
ref|XP_004143951.1| PREDICTED: uncharacterized protein LOC101208...   353   1e-94

>emb|CAN65189.1| hypothetical protein VITISV_032100 [Vitis vinifera]
          Length = 372

 Score =  405 bits (1040), Expect = e-110
 Identities = 213/382 (55%), Positives = 268/382 (70%), Gaps = 14/382 (3%)
 Frame = -1

Query: 1286 MGCVSSKQVEAAVVSDVVYRPAPSSFALFDINAIEEPWLKANIDEAQHDEKLVIVPAPIL 1107
            MGC SSK++EA V    VYRPAP+SFA+FDIN IEEPWLK +     H EK   +P  IL
Sbjct: 1    MGCSSSKRIEATVD---VYRPAPASFAVFDINTIEEPWLKVDHAPEHHQEKPTHLPPLIL 57

Query: 1106 EKLNTFELANEGPHSWSEVSKALEELKPCLHNQKPSL------PEPVQLKVHENTPISKP 945
            EKLN  E   EGP SW EVS+ALE+LKP LH+  P++      P+P      +++P  KP
Sbjct: 58   EKLNALE---EGPRSWDEVSRALEDLKPTLHSPAPAVTDADKPPQPQPQPPAQDSPTLKP 114

Query: 944  PI--KSNSFHTLDELDKKLIFNSTNLKKSGSMTEMNQHELKRVALKKVEPKGNDSQLGGI 771
                KS SFHT+ ELD KL    T      + TE+ + E  R+  KK E K  D+    +
Sbjct: 115  QATRKSLSFHTVAELDTKLSSKPTE----STRTELKKTESMRINSKKPESK-RDAAAAKV 169

Query: 770  APAPIIVEGLRPVKENMFILKDRMERGKDGT------IMKRKNPLDDYPEKCPPGGAESV 609
            APA ++ EG+RPVK+NMFIL+DR+ER ++G       +M R++PL +YPEKCPPGGA+S+
Sbjct: 170  APAVVVSEGMRPVKDNMFILRDRLEREREGKSANFDKMMSRRDPLSEYPEKCPPGGADSL 229

Query: 608  VLYTTTLRGVRRTFEDCNRIRTVIDLHQVVFDERDVSLHGQFLNELRAMLGEGVSVPRLF 429
            VLYTT+L GVRRT+EDCNR+R+V++ H+VVFDERDVSLHG+FL ELR +LGE  SVPRLF
Sbjct: 230  VLYTTSLGGVRRTYEDCNRLRSVLESHRVVFDERDVSLHGEFLKELRELLGEEXSVPRLF 289

Query: 428  IKGRYIGGVDEVIELNELGRLSKLLNAVGRSREPXXXXXXXXXGSRFVPCLECGGSCKVL 249
            +KGRY+GGV+EV+ELNE GRL KLLN     R           G+RFVPCLECGGSCKV+
Sbjct: 290  VKGRYVGGVEEVVELNEWGRLGKLLNCAKVERGVGRQGCEGCGGARFVPCLECGGSCKVM 349

Query: 248  IVDKKERCAQCNENGLVQCPIC 183
            + + KERC++CNENGLVQCP C
Sbjct: 350  VGETKERCSECNENGLVQCPAC 371


>ref|XP_002266905.1| PREDICTED: uncharacterized protein LOC100247840 [Vitis vinifera]
          Length = 371

 Score =  404 bits (1037), Expect = e-110
 Identities = 212/382 (55%), Positives = 268/382 (70%), Gaps = 14/382 (3%)
 Frame = -1

Query: 1286 MGCVSSKQVEAAVVSDVVYRPAPSSFALFDINAIEEPWLKANIDEAQHDEKLVIVPAPIL 1107
            MGC SSK++EA V    VYRPAP+SFA+FDIN IEEPWLK +     H EK   +P  IL
Sbjct: 1    MGCSSSKRIEATVD---VYRPAPASFAVFDINTIEEPWLKVDHAPEHHQEKPTHLPPLIL 57

Query: 1106 EKLNTFELANEGPHSWSEVSKALEELKPCLHNQKPSL------PEPVQLKVHENTPISKP 945
            EKLN  E   EGP SW EVS+ALE+LKP LH+  P++      P+P      +++P  KP
Sbjct: 58   EKLNALE---EGPRSWDEVSRALEDLKPTLHSPAPAVTDADKPPQPQPQPPAQDSPTLKP 114

Query: 944  PI--KSNSFHTLDELDKKLIFNSTNLKKSGSMTEMNQHELKRVALKKVEPKGNDSQLGGI 771
                KS SFHT+ ELD KL    T      + TE+ + E  R+  KK  P+  D+    +
Sbjct: 115  QATRKSLSFHTVAELDTKLSSKPTE----STRTELKKTESIRINSKK--PESRDAAAAKV 168

Query: 770  APAPIIVEGLRPVKENMFILKDRMERGKDGT------IMKRKNPLDDYPEKCPPGGAESV 609
            APA ++ EG+RPVK+NMFIL+DR+ER ++G       +M R++PL +YPEKCPPGGA+S+
Sbjct: 169  APAVVVSEGMRPVKDNMFILRDRLEREREGKSANFDKMMSRRDPLSEYPEKCPPGGADSL 228

Query: 608  VLYTTTLRGVRRTFEDCNRIRTVIDLHQVVFDERDVSLHGQFLNELRAMLGEGVSVPRLF 429
            VLYTT+L GVRRT+EDCNR+R+V++ H+VVFDERDVSLHG+FL ELR +LGE  SVPRLF
Sbjct: 229  VLYTTSLGGVRRTYEDCNRLRSVLESHRVVFDERDVSLHGEFLKELRELLGEESSVPRLF 288

Query: 428  IKGRYIGGVDEVIELNELGRLSKLLNAVGRSREPXXXXXXXXXGSRFVPCLECGGSCKVL 249
            +KGRY+GGV+EV+ELNE GRL KLLN     R           G+RFVPCLECGGSCKV+
Sbjct: 289  VKGRYVGGVEEVVELNEWGRLGKLLNCAKVERGVGRQGCEGCGGARFVPCLECGGSCKVM 348

Query: 248  IVDKKERCAQCNENGLVQCPIC 183
            + + KERC++CNENGLVQCP C
Sbjct: 349  VGETKERCSECNENGLVQCPAC 370


>ref|XP_002518846.1| electron transporter, putative [Ricinus communis]
            gi|223541833|gb|EEF43379.1| electron transporter,
            putative [Ricinus communis]
          Length = 376

 Score =  369 bits (947), Expect = 1e-99
 Identities = 201/384 (52%), Positives = 259/384 (67%), Gaps = 16/384 (4%)
 Frame = -1

Query: 1286 MGCVSSKQVEAAVVSDVVYRPAPSSFALFDINAIEEPWLKANIDEAQHDEKLVIVPAPIL 1107
            MGC SSK +EA  V+  +YRP PSSFA+FDIN+I+EPWL  +    ++ EK   +PAPIL
Sbjct: 1    MGCNSSKAIEATTVA--IYRPPPSSFAVFDINSIQEPWLSMDNTTQENQEKPTHLPAPIL 58

Query: 1106 EKLNTFELANEGPHSWSEVSKALEELKPCLHNQK------PSLPEPVQLKVHENTPISKP 945
            EKLN  E   + PH+W EVSKALE+LKP L N+       P  P+ ++    ++T   K 
Sbjct: 59   EKLNKLEA--DTPHTWDEVSKALEDLKPALDNKSLIVLPPPPKPDTIKQPTKDSTQEKKQ 116

Query: 944  -PIKSNSFHTLDELDKKLIFNSTNLKKSGSMTEMNQHELKRVALKKVEPKGNDS-QLGGI 771
             P KS+SFHT++ELD KL     + K+S    E+ + E      KK E     + QL  +
Sbjct: 117  APKKSSSFHTVEELDAKL-----SSKESRPKNELRKSESMGTGFKKTEVMNKTTDQLSRV 171

Query: 770  APAPIIVEG--LRPVKENMFILKDRMERGKDGTI-----MKRKNPLDDYPEKCPP-GGAE 615
            A  P    G  ++PVKEN+FIL+DR ER K+G +     MKR +PL +YPEK PP GGAE
Sbjct: 172  AVEPETGSGKVIKPVKENIFILRDRQEREKEGKMANYDKMKRLDPLSEYPEKIPPNGGAE 231

Query: 614  SVVLYTTTLRGVRRTFEDCNRIRTVIDLHQVVFDERDVSLHGQFLNELRAMLGEGVSVPR 435
            SVV+YTT+LRGVR+TFEDCNR+R++++ H+VVFDERDVSLHG FLNELR +LGE  SVPR
Sbjct: 232  SVVIYTTSLRGVRKTFEDCNRVRSLLEGHRVVFDERDVSLHGDFLNELRELLGEEASVPR 291

Query: 434  LFIKGRYIGGVDEVIELNELGRLSKLLNAVGRSREPXXXXXXXXXGSRFVPCLECGGSCK 255
            +F+KGRY GGVD VIELNE GRL ++++     R           G+RFVPC++CGGSCK
Sbjct: 292  VFVKGRYFGGVDNVIELNETGRLGRIMSWARVERGVGRQACEGCGGARFVPCVDCGGSCK 351

Query: 254  VLIVDKKERCAQCNENGLVQCPIC 183
            VL+   KERC +CNENGL+ CP C
Sbjct: 352  VLVDGVKERCGECNENGLMLCPAC 375


>ref|XP_002303660.1| hypothetical protein POPTRDRAFT_554508 [Populus trichocarpa]
            gi|222841092|gb|EEE78639.1| hypothetical protein
            POPTRDRAFT_554508 [Populus trichocarpa]
          Length = 364

 Score =  363 bits (933), Expect = 5e-98
 Identities = 200/379 (52%), Positives = 250/379 (65%), Gaps = 11/379 (2%)
 Frame = -1

Query: 1286 MGCVSSKQVEAAVVSDVVYRPAPSSFALFDINAIEEPWLKANIDEAQHDEKLVIVPAPIL 1107
            MGC SSK++EA V    VYRP PSSFA+FDIN+I+EPWL   + +    EK   VPAPIL
Sbjct: 1    MGCNSSKRIEANVD---VYRPPPSSFAVFDINSIQEPWL---VVDNSAPEKTSSVPAPIL 54

Query: 1106 EKLNTFELANEGPHSWSEVSKALEELKPCLHNQKP----SLPE-----PVQLKVHENTPI 954
            EKLN FE   + P SW EVSKAL++LKP L+N+ P    S P+     P Q+        
Sbjct: 55   EKLNKFE--TDAPRSWDEVSKALQDLKPTLNNKTPIATPSPPQKPDTTPAQVAKTNQEKK 112

Query: 953  SKPPIKSNSFHTLDELDKKLIFNSTNLKKSGSMTEMNQHELKRVALKKVEPKGNDSQLGG 774
             +P  KS SFHTL+EL+ K+              E+ + E  R   +KVE         G
Sbjct: 113  QEPIRKSVSFHTLEELEAKIAPKPEK--------ELKKTESVRTLSRKVEVVNKTESRVG 164

Query: 773  IAPAPIIVEG--LRPVKENMFILKDRMERGKDGTIMKRKNPLDDYPEKCPPGGAESVVLY 600
              P      G  +R VKEN+FI++DR+ERGK+G  +K+ +PL  + EKCPPGGA+SVVLY
Sbjct: 165  TEPVTEPSGGGVIRSVKENIFIVRDRLERGKEGKPLKKFDPLSGFEEKCPPGGADSVVLY 224

Query: 599  TTTLRGVRRTFEDCNRIRTVIDLHQVVFDERDVSLHGQFLNELRAMLGEGVSVPRLFIKG 420
            TT+LRG+RRTF+DC R++T+ +LH VVFDERDVSLHG+FLNELR ++GEG SVPR+FIKG
Sbjct: 225  TTSLRGIRRTFDDCTRVKTLFELHHVVFDERDVSLHGEFLNELRDLVGEGTSVPRVFIKG 284

Query: 419  RYIGGVDEVIELNELGRLSKLLNAVGRSREPXXXXXXXXXGSRFVPCLECGGSCKVLIVD 240
            RYIGGVDEV+ELNE G+L ++L      R            +RFVPCLEC GSCKVLI  
Sbjct: 285  RYIGGVDEVVELNESGQLGRMLVWARVGRVEGRQACEGCGDARFVPCLECSGSCKVLIDG 344

Query: 239  KKERCAQCNENGLVQCPIC 183
             KERC +CNENGLV+CP C
Sbjct: 345  AKERCGKCNENGLVRCPTC 363


>ref|XP_004143951.1| PREDICTED: uncharacterized protein LOC101208965 [Cucumis sativus]
            gi|449517489|ref|XP_004165778.1| PREDICTED:
            uncharacterized LOC101208965 [Cucumis sativus]
          Length = 361

 Score =  353 bits (905), Expect = 1e-94
 Identities = 189/379 (49%), Positives = 245/379 (64%), Gaps = 10/379 (2%)
 Frame = -1

Query: 1286 MGCVSSKQVEAAVVSDVVYRPAPSSFALFDINAIEEPWLKANID-------EAQHDEKLV 1128
            MGC SSK++EA V    VYRPAP+SFA+FDINAIEEPW+K   +           +EK  
Sbjct: 1    MGCTSSKRIEATVD---VYRPAPASFAVFDINAIEEPWVKVMEELPPPPEEPPVKEEKSA 57

Query: 1127 IVPAPILEKLNTFELANEGPHSWSEVSKALEELKPCLHN---QKPSLPEPVQLKVHENTP 957
            IVP PILEKL++FE  +E PHSW EVSKALE+LKP L +     P+ P  V         
Sbjct: 58   IVPVPILEKLSSFE--SEAPHSWDEVSKALEDLKPALRSVTEPPPTNPLAVTAATPAVVV 115

Query: 956  ISKPPIKSNSFHTLDELDKKLIFNSTNLKKSGSMTEMNQHELKRVALKKVEPKGNDSQLG 777
              +PP KS+SFHT+ ELD KL         S    E     L++ A  +  P+  + + G
Sbjct: 116  AKQPPRKSSSFHTVAELDAKLS------PSSKPTAESKTAGLRKTATFRPGPEKPEQRTG 169

Query: 776  GIAPAPIIVEGLRPVKENMFILKDRMERGKDGTIMKRKNPLDDYPEKCPPGGAESVVLYT 597
                     +  + VKEN+F+++DR ER ++G    R +PL ++PEKCPPGGAE+VVLYT
Sbjct: 170  D-------PDRFKSVKENIFLVRDREEREREGQKPVRFDPLSEFPEKCPPGGAETVVLYT 222

Query: 596  TTLRGVRRTFEDCNRIRTVIDLHQVVFDERDVSLHGQFLNELRAMLGEGVSVPRLFIKGR 417
            T+LRGVRRTFEDCNR+++V++L QVV DERDV+LHG+FL EL+ +LG+  +VP++F+KGR
Sbjct: 223  TSLRGVRRTFEDCNRVKSVLELQQVVVDERDVALHGEFLKELKELLGDEATVPKMFVKGR 282

Query: 416  YIGGVDEVIELNELGRLSKLLNAVGRSREPXXXXXXXXXGSRFVPCLECGGSCKVLIVDK 237
            YIGG DEV+ LNE+G+L ++L                  G+RFVPC ECGGSCKV+  D 
Sbjct: 283  YIGGADEVVALNEMGKLRRILRRAAVETGAGRQGCEGCGGARFVPCYECGGSCKVIKGDT 342

Query: 236  KERCAQCNENGLVQCPICH 180
            KERC  CNENGL  CP CH
Sbjct: 343  KERCGACNENGLAHCPACH 361


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