BLASTX nr result

ID: Coptis23_contig00008296 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008296
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327800.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|XP_002516040.1| conserved hypothetical protein [Ricinus comm...    67   2e-09
gb|AFK40830.1| unknown [Lotus japonicus]                               62   5e-08
emb|CBI34984.3| unnamed protein product [Vitis vinifera]               62   6e-08
ref|XP_002280785.1| PREDICTED: uncharacterized protein LOC100262...    62   6e-08

>ref|XP_002327800.1| predicted protein [Populus trichocarpa] gi|222836885|gb|EEE75278.1|
           predicted protein [Populus trichocarpa]
          Length = 325

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 38/103 (36%), Positives = 55/103 (53%)
 Frame = -2

Query: 310 MGLFTYCLTGGALILLGAWETLFLSYTTLHXXXXXXXXXXXXXPNPTIKRRKNGQPFFIS 131
           MGLF+  L G   IL+GAWE+L  S T                  P    ++N      S
Sbjct: 1   MGLFSMTLAGSGFILIGAWESL-TSSTASQNRNSVSNPSSPLKQTPKSATQRNSNSSSSS 59

Query: 130 VRFIGIALFTFCFIFDSLVSLVDAYNSKDQVGFALQVEIIAIA 2
             +I + +F+  FI +SL+S  +A NS+DQVG ALQ++I+A+A
Sbjct: 60  ANYITVTIFSLLFIVNSLISFFNAVNSRDQVGSALQLQILAVA 102


>ref|XP_002516040.1| conserved hypothetical protein [Ricinus communis]
           gi|223544945|gb|EEF46460.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 318

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 38/103 (36%), Positives = 61/103 (59%)
 Frame = -2

Query: 310 MGLFTYCLTGGALILLGAWETLFLSYTTLHXXXXXXXXXXXXXPNPTIKRRKNGQPFFIS 131
           MGLF+  + G   +L+GA+E+L  S ++                   I++   GQ    S
Sbjct: 1   MGLFSLTVAGAGFMLIGAYESLSSSMSS--------SPVNHQITKSAIEKNPKGQ----S 48

Query: 130 VRFIGIALFTFCFIFDSLVSLVDAYNSKDQVGFALQVEIIAIA 2
           + +IGI +F+F FI DSL+SL +A +SKD +G+ALQ++++AIA
Sbjct: 49  LIYIGITVFSFLFIIDSLISLFNAIDSKDTIGYALQLQVLAIA 91


>gb|AFK40830.1| unknown [Lotus japonicus]
          Length = 189

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
 Frame = -2

Query: 310 MGLFTYCLTGGALILLGAWETLFLSYTTLHXXXXXXXXXXXXXPNPTIKRRKNGQ-PFFI 134
           M L ++   GG  IL+GA E+L  S T+                NP  K +KN + PFFI
Sbjct: 1   MELLSFAFVGGGFILIGALESLGASSTS----------------NPDSKTKKNHRSPFFI 44

Query: 133 SVRFIGIALFTFCFIFDSLVSLVDAYNSKDQVGFALQVEIIAIA 2
           S     IA+F+   I +SLVS+ DA+ S D VG ALQ +++AIA
Sbjct: 45  S-----IAIFSSLIILNSLVSIFDAHKSNDAVGTALQFQVLAIA 83


>emb|CBI34984.3| unnamed protein product [Vitis vinifera]
          Length = 682

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 39/103 (37%), Positives = 51/103 (49%)
 Frame = -2

Query: 310 MGLFTYCLTGGALILLGAWETLFLSYTTLHXXXXXXXXXXXXXPNPTIKRRKNGQPFFIS 131
           MG FT  L G   IL+G WE+L  S  T                     R     P+   
Sbjct: 13  MGFFTLVLAGVGFILIGMWESLLSSSQTPKLDQSSITPGT---------RPGRKYPYSSP 63

Query: 130 VRFIGIALFTFCFIFDSLVSLVDAYNSKDQVGFALQVEIIAIA 2
           + F  IAL +F FI +SL SL+DA NSKD+VG  LQ++++A A
Sbjct: 64  LTFFSIALLSFFFICNSLYSLIDAVNSKDRVGSPLQLQVLATA 106


>ref|XP_002280785.1| PREDICTED: uncharacterized protein LOC100262740 [Vitis vinifera]
          Length = 318

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 39/103 (37%), Positives = 51/103 (49%)
 Frame = -2

Query: 310 MGLFTYCLTGGALILLGAWETLFLSYTTLHXXXXXXXXXXXXXPNPTIKRRKNGQPFFIS 131
           MG FT  L G   IL+G WE+L  S  T                     R     P+   
Sbjct: 1   MGFFTLVLAGVGFILIGMWESLLSSSQTPKLDQSSITPGT---------RPGRKYPYSSP 51

Query: 130 VRFIGIALFTFCFIFDSLVSLVDAYNSKDQVGFALQVEIIAIA 2
           + F  IAL +F FI +SL SL+DA NSKD+VG  LQ++++A A
Sbjct: 52  LTFFSIALLSFFFICNSLYSLIDAVNSKDRVGSPLQLQVLATA 94


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