BLASTX nr result
ID: Coptis23_contig00008296
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00008296 (323 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002327800.1| predicted protein [Populus trichocarpa] gi|2... 68 7e-10 ref|XP_002516040.1| conserved hypothetical protein [Ricinus comm... 67 2e-09 gb|AFK40830.1| unknown [Lotus japonicus] 62 5e-08 emb|CBI34984.3| unnamed protein product [Vitis vinifera] 62 6e-08 ref|XP_002280785.1| PREDICTED: uncharacterized protein LOC100262... 62 6e-08 >ref|XP_002327800.1| predicted protein [Populus trichocarpa] gi|222836885|gb|EEE75278.1| predicted protein [Populus trichocarpa] Length = 325 Score = 68.2 bits (165), Expect = 7e-10 Identities = 38/103 (36%), Positives = 55/103 (53%) Frame = -2 Query: 310 MGLFTYCLTGGALILLGAWETLFLSYTTLHXXXXXXXXXXXXXPNPTIKRRKNGQPFFIS 131 MGLF+ L G IL+GAWE+L S T P ++N S Sbjct: 1 MGLFSMTLAGSGFILIGAWESL-TSSTASQNRNSVSNPSSPLKQTPKSATQRNSNSSSSS 59 Query: 130 VRFIGIALFTFCFIFDSLVSLVDAYNSKDQVGFALQVEIIAIA 2 +I + +F+ FI +SL+S +A NS+DQVG ALQ++I+A+A Sbjct: 60 ANYITVTIFSLLFIVNSLISFFNAVNSRDQVGSALQLQILAVA 102 >ref|XP_002516040.1| conserved hypothetical protein [Ricinus communis] gi|223544945|gb|EEF46460.1| conserved hypothetical protein [Ricinus communis] Length = 318 Score = 66.6 bits (161), Expect = 2e-09 Identities = 38/103 (36%), Positives = 61/103 (59%) Frame = -2 Query: 310 MGLFTYCLTGGALILLGAWETLFLSYTTLHXXXXXXXXXXXXXPNPTIKRRKNGQPFFIS 131 MGLF+ + G +L+GA+E+L S ++ I++ GQ S Sbjct: 1 MGLFSLTVAGAGFMLIGAYESLSSSMSS--------SPVNHQITKSAIEKNPKGQ----S 48 Query: 130 VRFIGIALFTFCFIFDSLVSLVDAYNSKDQVGFALQVEIIAIA 2 + +IGI +F+F FI DSL+SL +A +SKD +G+ALQ++++AIA Sbjct: 49 LIYIGITVFSFLFIIDSLISLFNAIDSKDTIGYALQLQVLAIA 91 >gb|AFK40830.1| unknown [Lotus japonicus] Length = 189 Score = 62.0 bits (149), Expect = 5e-08 Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 1/104 (0%) Frame = -2 Query: 310 MGLFTYCLTGGALILLGAWETLFLSYTTLHXXXXXXXXXXXXXPNPTIKRRKNGQ-PFFI 134 M L ++ GG IL+GA E+L S T+ NP K +KN + PFFI Sbjct: 1 MELLSFAFVGGGFILIGALESLGASSTS----------------NPDSKTKKNHRSPFFI 44 Query: 133 SVRFIGIALFTFCFIFDSLVSLVDAYNSKDQVGFALQVEIIAIA 2 S IA+F+ I +SLVS+ DA+ S D VG ALQ +++AIA Sbjct: 45 S-----IAIFSSLIILNSLVSIFDAHKSNDAVGTALQFQVLAIA 83 >emb|CBI34984.3| unnamed protein product [Vitis vinifera] Length = 682 Score = 61.6 bits (148), Expect = 6e-08 Identities = 39/103 (37%), Positives = 51/103 (49%) Frame = -2 Query: 310 MGLFTYCLTGGALILLGAWETLFLSYTTLHXXXXXXXXXXXXXPNPTIKRRKNGQPFFIS 131 MG FT L G IL+G WE+L S T R P+ Sbjct: 13 MGFFTLVLAGVGFILIGMWESLLSSSQTPKLDQSSITPGT---------RPGRKYPYSSP 63 Query: 130 VRFIGIALFTFCFIFDSLVSLVDAYNSKDQVGFALQVEIIAIA 2 + F IAL +F FI +SL SL+DA NSKD+VG LQ++++A A Sbjct: 64 LTFFSIALLSFFFICNSLYSLIDAVNSKDRVGSPLQLQVLATA 106 >ref|XP_002280785.1| PREDICTED: uncharacterized protein LOC100262740 [Vitis vinifera] Length = 318 Score = 61.6 bits (148), Expect = 6e-08 Identities = 39/103 (37%), Positives = 51/103 (49%) Frame = -2 Query: 310 MGLFTYCLTGGALILLGAWETLFLSYTTLHXXXXXXXXXXXXXPNPTIKRRKNGQPFFIS 131 MG FT L G IL+G WE+L S T R P+ Sbjct: 1 MGFFTLVLAGVGFILIGMWESLLSSSQTPKLDQSSITPGT---------RPGRKYPYSSP 51 Query: 130 VRFIGIALFTFCFIFDSLVSLVDAYNSKDQVGFALQVEIIAIA 2 + F IAL +F FI +SL SL+DA NSKD+VG LQ++++A A Sbjct: 52 LTFFSIALLSFFFICNSLYSLIDAVNSKDRVGSPLQLQVLATA 94