BLASTX nr result

ID: Coptis23_contig00008293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008293
         (2133 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279210.1| PREDICTED: CBS domain-containing protein CBS...   501   e-139
ref|XP_002512622.1| conserved hypothetical protein [Ricinus comm...   487   e-135
ref|XP_002325465.1| predicted protein [Populus trichocarpa] gi|2...   486   e-135
ref|XP_002329005.1| predicted protein [Populus trichocarpa] gi|2...   479   e-132
ref|XP_003534522.1| PREDICTED: CBS domain-containing protein CBS...   474   e-131

>ref|XP_002279210.1| PREDICTED: CBS domain-containing protein CBSX6 [Vitis vinifera]
            gi|297735292|emb|CBI17654.3| unnamed protein product
            [Vitis vinifera]
          Length = 427

 Score =  501 bits (1291), Expect = e-139
 Identities = 267/420 (63%), Positives = 303/420 (72%), Gaps = 9/420 (2%)
 Frame = +3

Query: 261  MASVFLYHVVGDLTVGKPELVEFYENESIESAIRAIGECTEGGIPVWKRKQHKGVVGVNF 440
            MASVFLYHVVGDLTVGKPELVEF E E++ESAIR IGE  EG IP+WKR+ H GV+    
Sbjct: 1    MASVFLYHVVGDLTVGKPELVEFPETETVESAIRVIGESAEGSIPIWKRRSHVGVM---- 56

Query: 441  YENSEARMQRFIGIINSLDVVTYLSKEECLKDQEKAMKTPVSEVVVPNKSLLKEVDPGTR 620
             E SE R QRF+GI+NSLD+V +L+++ CL DQEKAMKTPVSEVVVPN SLL+EVDP TR
Sbjct: 57   -EKSEMRQQRFVGILNSLDIVAFLARDACLVDQEKAMKTPVSEVVVPNNSLLREVDPATR 115

Query: 621  LIDALEIMKQGVRRLLVPKSVAWRGMSKRFSIIYNGKWLKNINTXXXXXXXXXXXTRP-- 794
            LIDALE+MK G++RLLVPKSV W+GMSKRFSI+YNGKWLKN++             RP  
Sbjct: 116  LIDALEMMKHGLKRLLVPKSVVWKGMSKRFSILYNGKWLKNLDASSSSTNLAPNANRPSS 175

Query: 795  ---PSFRENKFCCLSREDVIRFXXXXXXXXXXXXXXXXXXXNVVNPHYHYIEASSPALEV 965
               PS R NKFCCLSREDVIRF                     ++P+Y+ IEAS PA++V
Sbjct: 176  SSTPSSR-NKFCCLSREDVIRFVIGCLGALAPLPLSSISSLGAISPNYYSIEASFPAIQV 234

Query: 966  NHNPPLDPGAVAVIESTSDGLSKIIGEISASKLWKCDYLAAAWGLANLSAGQFVMGVEEN 1145
                P DP AVAV+EST DG  KIIGEISA KLWKCDYLAAAW LANLSAGQFVMGVE+N
Sbjct: 235  TQKLPQDPSAVAVVESTPDGQYKIIGEISACKLWKCDYLAAAWALANLSAGQFVMGVEDN 294

Query: 1146 TSPGSLPDFSINSLG--DNAGVGGA--XXXXXXXXXXXXXXXXXXPTIGMGRSMYRGRSA 1313
             +  SLP FS+N  G  +N   GGA                    P+ G  RSMYRGRSA
Sbjct: 295  VTSRSLPHFSVNLTGGENNMANGGASTRQRKFSSRSIGFFSNPASPSFGASRSMYRGRSA 354

Query: 1314 PLTCKVTSSLAAVMAQMLSHRATHVWVTEAEDEESLVGVVGYVDILAAVTRHPATLIPAT 1493
            PLTCKVTSSLAAVMAQMLSHRATHVWVTEAE E+ LVGVVGY DILAAV + PA +IP+T
Sbjct: 355  PLTCKVTSSLAAVMAQMLSHRATHVWVTEAESEDILVGVVGYADILAAVIKQPAPVIPST 414


>ref|XP_002512622.1| conserved hypothetical protein [Ricinus communis]
            gi|223548583|gb|EEF50074.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 432

 Score =  487 bits (1253), Expect = e-135
 Identities = 260/434 (59%), Positives = 304/434 (70%), Gaps = 14/434 (3%)
 Frame = +3

Query: 261  MASVFLYHVVGDLTVGKPELVEFYENESIESAIRAIGECTEGGIPVWKRKQHKGVVGVNF 440
            MASVFLYHVVGDLTVGKPE+VEF E E++ESAIRAIGE TE GIPVWKR+ H     VN 
Sbjct: 1    MASVFLYHVVGDLTVGKPEMVEFCETETVESAIRAIGESTECGIPVWKRRSH-----VNM 55

Query: 441  YENSEARMQRFIGIINSLDVVTYLSKEECLKDQEKAMKTPVSEVVVPNKSLLKEVDPGTR 620
             EN+E R QRF+GI+NSLD+V +L+K +CL+DQEKAMKTPVSEVVVP+ SLLK+VDP TR
Sbjct: 56   IENNEMRQQRFVGILNSLDIVAFLAKAQCLEDQEKAMKTPVSEVVVPDNSLLKQVDPATR 115

Query: 621  LIDALEIMKQGVRRLLVPKSVAWRGMSKRFSIIYNGKWLKNINT--------XXXXXXXX 776
            LIDALE+MKQGV+RLLV K   W+GMSKRFSI+YNGKWLKN+++                
Sbjct: 116  LIDALEMMKQGVKRLLVSKGTVWKGMSKRFSILYNGKWLKNVDSSNSSNNLMGNSSNNLM 175

Query: 777  XXXTRPPS----FRENKFCCLSREDVIRFXXXXXXXXXXXXXXXXXXXNVVNPHYHYIEA 944
               +RP S       +KFCCLSREDVIRF                     +N +Y+ +EA
Sbjct: 176  SNISRPSSSSTTISRDKFCCLSREDVIRFIIGCLGALAPLPLSSISSLGAINFNYYSVEA 235

Query: 945  SSPALEVNHNPPLDPGAVAVIESTSDGLSKIIGEISASKLWKCDYLAAAWGLANLSAGQF 1124
            S  A+E     P DP AVAV+E   DG SKIIGEISAS+LWKCDYLAAAW LANLS+GQF
Sbjct: 236  SLSAIEATQKLPKDPCAVAVVEPMPDGHSKIIGEISASRLWKCDYLAAAWALANLSSGQF 295

Query: 1125 VMGVEENTSPGSLPDFSINSL--GDNAGVGGAXXXXXXXXXXXXXXXXXXPTIGMGRSMY 1298
            VMGVE+N +  SLPDF++NS    +N   GG                    + G+GRSMY
Sbjct: 296  VMGVEDNLTARSLPDFTVNSTVSDNNTANGGGSTRPKKFSSKSIGFNPGSSSFGIGRSMY 355

Query: 1299 RGRSAPLTCKVTSSLAAVMAQMLSHRATHVWVTEAEDEESLVGVVGYVDILAAVTRHPAT 1478
            RGRSAPLTCK+TSSLAAVMAQMLSHRATHVWVTEA+++E LVGVVGY DIL AVT+ PA+
Sbjct: 356  RGRSAPLTCKITSSLAAVMAQMLSHRATHVWVTEADNDEVLVGVVGYADILFAVTKPPAS 415

Query: 1479 LIPATP*CERLETE 1520
             IP     E   TE
Sbjct: 416  FIPINRSTEGFPTE 429


>ref|XP_002325465.1| predicted protein [Populus trichocarpa] gi|222862340|gb|EEE99846.1|
            predicted protein [Populus trichocarpa]
          Length = 422

 Score =  486 bits (1252), Expect = e-135
 Identities = 253/414 (61%), Positives = 300/414 (72%), Gaps = 7/414 (1%)
 Frame = +3

Query: 261  MASVFLYHVVGDLTVGKPELVEFYENESIESAIRAIGECTEGGIPVWKRKQHKGVVGVNF 440
            M SVFLYHVVGDLTVGKPE+VEFYE E++ESAIRAIGE TE GIPVWKRK H G++    
Sbjct: 1    MPSVFLYHVVGDLTVGKPEMVEFYETETVESAIRAIGESTECGIPVWKRKSHVGMI---- 56

Query: 441  YENSEARMQRFIGIINSLDVVTYLSKEECLKDQEKAMKTPVSEVVVPNKSLLKEVDPGTR 620
             ENSE R+QRF+GI+NSLD+V +L+  ECL+D++KA+KTPVS+VVVPN SLLK+VDP TR
Sbjct: 57   -ENSETRLQRFVGILNSLDIVAFLASTECLEDRDKAIKTPVSQVVVPNTSLLKQVDPATR 115

Query: 621  LIDALEIMKQGVRRLLVPKSVAWRGMSKRFSIIYNGKWLKNINT--XXXXXXXXXXXTRP 794
            LIDALE+MKQGVRRL+VPKS+ W+GMSKRFSI+YNGKWLKN +T              RP
Sbjct: 116  LIDALEMMKQGVRRLIVPKSMGWKGMSKRFSILYNGKWLKNADTSNSSSNNNLTINPNRP 175

Query: 795  PS----FRENKFCCLSREDVIRFXXXXXXXXXXXXXXXXXXXNVVNPHYHYIEASSPALE 962
             S       +KFCCLSREDVIRF                     +N +Y+ +EAS PA+E
Sbjct: 176  SSSSGTSNRDKFCCLSREDVIRFLIGCLGALAPLPLSSISSLGAINTNYNSLEASLPAIE 235

Query: 963  VNHNPPLDPGAVAVIESTSDGLSKIIGEISASKLWKCDYLAAAWGLANLSAGQFVMGVEE 1142
                 P DP A+AV+E   +G  KIIGEISAS+LWKCDYLAAAW LANLSAGQFVMGVE+
Sbjct: 236  ATRKLPEDPSAIAVVEPIPNGQCKIIGEISASRLWKCDYLAAAWALANLSAGQFVMGVED 295

Query: 1143 NTSPGSLPDFSINSLGDNAGVG-GAXXXXXXXXXXXXXXXXXXPTIGMGRSMYRGRSAPL 1319
            N +  SLPDF++NS  D+     GA                   +IG+GRS+YRGRSAPL
Sbjct: 296  NVTSRSLPDFAVNSAADDDNTAHGAGSTRLRKFSSRSIGFNPGNSIGIGRSVYRGRSAPL 355

Query: 1320 TCKVTSSLAAVMAQMLSHRATHVWVTEAEDEESLVGVVGYVDILAAVTRHPATL 1481
            TCK+TSSLAAVMAQMLSHRATHVWV E   ++ LVGVVGY DILAAVT+ PA++
Sbjct: 356  TCKITSSLAAVMAQMLSHRATHVWVIEDHSDDILVGVVGYADILAAVTKQPASV 409


>ref|XP_002329005.1| predicted protein [Populus trichocarpa] gi|222839239|gb|EEE77590.1|
            predicted protein [Populus trichocarpa]
          Length = 424

 Score =  479 bits (1233), Expect = e-132
 Identities = 256/419 (61%), Positives = 295/419 (70%), Gaps = 7/419 (1%)
 Frame = +3

Query: 261  MASVFLYHVVGDLTVGKPELVEFYENESIESAIRAIGECTEGGIPVWKRKQHKGVVGVNF 440
            MASVFLYHVVGDLTVGKPE+VEFYE E++ESAIRAIGE TE GIPVWKRK H     V+ 
Sbjct: 1    MASVFLYHVVGDLTVGKPEMVEFYETETVESAIRAIGESTECGIPVWKRKSH-----VSM 55

Query: 441  YENSEARMQRFIGIINSLDVVTYLSKEECLKDQEKAMKTPVSEVVVPNKSLLKEVDPGTR 620
             E SE R QRF+GI+NSLD+V +L+  ECL+DQ+KA+KT VS+VVVPN SLLK+VDP TR
Sbjct: 56   IETSEMRQQRFVGILNSLDIVAFLASTECLEDQDKAIKTSVSQVVVPNASLLKQVDPATR 115

Query: 621  LIDALEIMKQGVRRLLVPKSVAWRGMSKRFSIIYNGKWLKNIN-TXXXXXXXXXXXTRPP 797
            LIDALE+MKQGVRRLLVPKS+ W+GMSKRFS +YNGKWLKN + +           T  P
Sbjct: 116  LIDALEMMKQGVRRLLVPKSMVWKGMSKRFSFLYNGKWLKNADASNNSSNNNLTINTNRP 175

Query: 798  S-----FRENKFCCLSREDVIRFXXXXXXXXXXXXXXXXXXXNVVNPHYHYIEASSPALE 962
            S        NKFCCLSREDVIRF                    V+NP+Y  +EAS PA E
Sbjct: 176  SSSSGTSNRNKFCCLSREDVIRFLIGCLGALAPLPLSSISSLGVINPNYTSVEASLPAFE 235

Query: 963  VNHNPPLDPGAVAVIESTSDGLSKIIGEISASKLWKCDYLAAAWGLANLSAGQFVMGVEE 1142
                   DP  VAV+E   DG  KIIGEISAS+LWKCDYLAAAW LANLSAGQFVMGVE+
Sbjct: 236  ATRKLHGDPSEVAVVEPIPDGQCKIIGEISASRLWKCDYLAAAWALANLSAGQFVMGVED 295

Query: 1143 NTSPGSLPDFSINS-LGDNAGVGGAXXXXXXXXXXXXXXXXXXPTIGMGRSMYRGRSAPL 1319
            N +  SL DF++NS +GD +   G                    +I MGRSMYRGRSAPL
Sbjct: 296  NETARSLLDFAVNSAVGDESTANGIGSTRLREFSSRSIGFNPGSSIRMGRSMYRGRSAPL 355

Query: 1320 TCKVTSSLAAVMAQMLSHRATHVWVTEAEDEESLVGVVGYVDILAAVTRHPATLIPATP 1496
            TCK+TSSLAAVMAQMLSHRATHVWV E + ++ LVGVVGY DILAAVT+ PA++    P
Sbjct: 356  TCKITSSLAAVMAQMLSHRATHVWVIEDDSDDILVGVVGYADILAAVTKQPASVTVNRP 414


>ref|XP_003534522.1| PREDICTED: CBS domain-containing protein CBSX6-like [Glycine max]
          Length = 425

 Score =  474 bits (1219), Expect = e-131
 Identities = 250/418 (59%), Positives = 300/418 (71%), Gaps = 8/418 (1%)
 Frame = +3

Query: 261  MASVFLYHVVGDLTVGKPELVEFYENESIESAIRAIGECTEGGIPVWKRKQHKGVVGVNF 440
            MASVF+YHVVGDLTVGKPEL EF+E+E++ESAIRAIGEC EG IP+WK++   G+     
Sbjct: 1    MASVFVYHVVGDLTVGKPELAEFHESETVESAIRAIGECHEGTIPIWKKRSQLGI----- 55

Query: 441  YENSEARMQRFIGIINSLDVVTYLSKEECLKDQEKAMKTPVSEVVVPNKSLLKEVDPGTR 620
             ENS+ R QRF+GI++S D+V +L+K +CL+DQ+KA+KTPVSEVVV N SLL+ VDP TR
Sbjct: 56   -ENSDMRQQRFVGILSSFDIVAFLAKSQCLEDQDKALKTPVSEVVVHNNSLLRVVDPATR 114

Query: 621  LIDALEIMKQGVRRLLVPKSVAWRGMSKRFSIIYNGKWLKNINT-XXXXXXXXXXXTRPP 797
            LIDAL++MKQGV+RLLVPKSVAW+GMSKRFS+IY GKWLKN  +             R P
Sbjct: 115  LIDALDMMKQGVKRLLVPKSVAWKGMSKRFSVIYYGKWLKNSESPGNSSNNLPLNMNRSP 174

Query: 798  SFR----ENKFCCLSREDVIRFXXXXXXXXXXXXXXXXXXXNVVNPHYHYIEASSPALEV 965
            S       +++CCLSREDV+RF                     +N +Y+YIE+S+PA+E 
Sbjct: 175  STSITPIRDRYCCLSREDVLRFIIGCLGALAPLPLTSIASLGAINSNYNYIESSTPAIEA 234

Query: 966  NHNPPLDPGAVAVIESTSDGLSKIIGEISASKLWKCDYLAAAWGLANLSAGQFVMGVEEN 1145
                P DP AVAVIESTSDG  KIIGEISA KLWKCDYL+AAW LANLSAGQFVMGVE+N
Sbjct: 235  TQKLPQDPSAVAVIESTSDGQCKIIGEISACKLWKCDYLSAAWALANLSAGQFVMGVEDN 294

Query: 1146 TSPGSLPDFSIN-SLGDN--AGVGGAXXXXXXXXXXXXXXXXXXPTIGMGRSMYRGRSAP 1316
             +P SLP FS++ + G+N  A  GG+                        RSMYRGRSAP
Sbjct: 295  VTPRSLPQFSLDLASGENDLANGGGSRKPRKFSSRSVGFFSNTASHSFGSRSMYRGRSAP 354

Query: 1317 LTCKVTSSLAAVMAQMLSHRATHVWVTEAEDEESLVGVVGYVDILAAVTRHPATLIPA 1490
            LTCK+TSSLAAV+AQMLSHRATHVWVTE E++E LVGVVGY DILAAVT+ P   IPA
Sbjct: 355  LTCKITSSLAAVLAQMLSHRATHVWVTEDENDEVLVGVVGYADILAAVTKPPTAFIPA 412


Top