BLASTX nr result

ID: Coptis23_contig00008286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008286
         (735 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142920.1| PREDICTED: PITH domain-containing protein 1-...   125   9e-27
gb|AFK41413.1| unknown [Lotus japonicus]                              123   4e-26
ref|NP_001236845.1| uncharacterized protein LOC100305543 [Glycin...   123   4e-26
ref|XP_002277123.1| PREDICTED: PITH domain-containing protein 1 ...   122   8e-26
ref|XP_002324166.1| predicted protein [Populus trichocarpa] gi|1...   122   1e-25

>ref|XP_004142920.1| PREDICTED: PITH domain-containing protein 1-like [Cucumis sativus]
           gi|449494405|ref|XP_004159538.1| PREDICTED: PITH
           domain-containing protein 1-like [Cucumis sativus]
          Length = 204

 Score =  125 bits (314), Expect = 9e-27
 Identities = 58/73 (79%), Positives = 65/73 (89%)
 Frame = -2

Query: 377 LPKHVCEEHDCSSDFSLYKHIDLPKVSALNEAAPGSVKSVFKAWEQRLDSSGAHLESNDG 198
           L  H CE+HDCSSD+SLYKHIDLP+VSALNEA PGSVKSVFKAWE RL+SSG HLESN+G
Sbjct: 4   LHDHSCEDHDCSSDWSLYKHIDLPRVSALNEATPGSVKSVFKAWEHRLNSSGDHLESNEG 63

Query: 197 DPELLVFIPWVME 159
           DPELLVFIP+  +
Sbjct: 64  DPELLVFIPFTSD 76


>gb|AFK41413.1| unknown [Lotus japonicus]
          Length = 204

 Score =  123 bits (308), Expect = 4e-26
 Identities = 57/73 (78%), Positives = 64/73 (87%)
 Frame = -2

Query: 377 LPKHVCEEHDCSSDFSLYKHIDLPKVSALNEAAPGSVKSVFKAWEQRLDSSGAHLESNDG 198
           L  H CE+HDCS+D+SLYKHIDL KVSALNEA PGSVKSVFKAWE RL+SSG HLESN+G
Sbjct: 4   LHDHSCEDHDCSTDWSLYKHIDLSKVSALNEATPGSVKSVFKAWEDRLNSSGGHLESNEG 63

Query: 197 DPELLVFIPWVME 159
           DPELLVFIP+  +
Sbjct: 64  DPELLVFIPFTSD 76


>ref|NP_001236845.1| uncharacterized protein LOC100305543 [Glycine max]
           gi|255625863|gb|ACU13276.1| unknown [Glycine max]
          Length = 204

 Score =  123 bits (308), Expect = 4e-26
 Identities = 57/73 (78%), Positives = 65/73 (89%)
 Frame = -2

Query: 377 LPKHVCEEHDCSSDFSLYKHIDLPKVSALNEAAPGSVKSVFKAWEQRLDSSGAHLESNDG 198
           L  H CE+HDCSS++SLYKHIDL KV+ALNEA PGSVKSVFKAWE+RLDSSG HLESN+G
Sbjct: 4   LHDHSCEDHDCSSNWSLYKHIDLSKVTALNEANPGSVKSVFKAWEERLDSSGVHLESNEG 63

Query: 197 DPELLVFIPWVME 159
           DPELLVFIP+  +
Sbjct: 64  DPELLVFIPFTSD 76


>ref|XP_002277123.1| PREDICTED: PITH domain-containing protein 1 [Vitis vinifera]
           gi|296081613|emb|CBI20618.3| unnamed protein product
           [Vitis vinifera]
          Length = 204

 Score =  122 bits (306), Expect = 8e-26
 Identities = 57/73 (78%), Positives = 64/73 (87%)
 Frame = -2

Query: 377 LPKHVCEEHDCSSDFSLYKHIDLPKVSALNEAAPGSVKSVFKAWEQRLDSSGAHLESNDG 198
           L  H CE+HDC++D+SLYKHIDL KVSALNEA PGSVKSVFKAWEQRL+SS  HLESNDG
Sbjct: 4   LHDHSCEDHDCAADWSLYKHIDLSKVSALNEAVPGSVKSVFKAWEQRLNSSEGHLESNDG 63

Query: 197 DPELLVFIPWVME 159
           DPELLVFIP+  +
Sbjct: 64  DPELLVFIPFTSD 76


>ref|XP_002324166.1| predicted protein [Populus trichocarpa] gi|118488151|gb|ABK95895.1|
           unknown [Populus trichocarpa]
           gi|222865600|gb|EEF02731.1| predicted protein [Populus
           trichocarpa]
          Length = 204

 Score =  122 bits (305), Expect = 1e-25
 Identities = 55/70 (78%), Positives = 62/70 (88%)
 Frame = -2

Query: 368 HVCEEHDCSSDFSLYKHIDLPKVSALNEAAPGSVKSVFKAWEQRLDSSGAHLESNDGDPE 189
           H CE+HDCSS++SLYKHIDLPKVSALNEA PGS KSVFKAWE RLDSS  HLESN+GDPE
Sbjct: 7   HSCEDHDCSSNWSLYKHIDLPKVSALNEAVPGSAKSVFKAWEHRLDSSAGHLESNEGDPE 66

Query: 188 LLVFIPWVME 159
           LLV+IP+  +
Sbjct: 67  LLVYIPFTSD 76


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