BLASTX nr result

ID: Coptis23_contig00008277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008277
         (812 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522105.1| conserved hypothetical protein [Ricinus comm...   164   2e-38
ref|XP_002298793.1| predicted protein [Populus trichocarpa] gi|2...   157   2e-36
ref|XP_002276036.1| PREDICTED: uncharacterized protein LOC100251...   149   5e-34
ref|XP_004159921.1| PREDICTED: uncharacterized LOC101213497 [Cuc...   149   7e-34
ref|XP_004136931.1| PREDICTED: uncharacterized protein LOC101213...   149   7e-34

>ref|XP_002522105.1| conserved hypothetical protein [Ricinus communis]
           gi|223538704|gb|EEF40305.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 200

 Score =  164 bits (415), Expect = 2e-38
 Identities = 88/153 (57%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
 Frame = -3

Query: 774 TRDAGIIIDPRNWSSARFTNLVNDNFXXXXXXXXXXXXXXXXXXXXXXLVRFVQNMFRKI 595
           T  + +I DPRNW  +  T+ + D+                        VRF+QN+F+K+
Sbjct: 52  TNTSNLINDPRNWGRSINTSELFDD----GNDDDEEEEEEEEDRSLDLFVRFIQNVFKKV 107

Query: 594 SKRARKAVRSVLPVSISTKLVGFSVNGVIILAFLWVLKAFLEVVCTFGSLVFVSILLIRG 415
           SKRARKA RSVLP+SISTKLVGFSVNGV+ILAFLWVLKAFLEVVCT GS+VFVSILLIRG
Sbjct: 108 SKRARKAARSVLPLSISTKLVGFSVNGVLILAFLWVLKAFLEVVCTLGSVVFVSILLIRG 167

Query: 414 TWSGISYLQDTRHRNSN-IDGENSVWTGAQPAS 319
            WSGI+YLQ++R+   N ++ E+  WTGAQPA+
Sbjct: 168 IWSGITYLQESRYLELNEVEDEHHEWTGAQPAT 200


>ref|XP_002298793.1| predicted protein [Populus trichocarpa] gi|222846051|gb|EEE83598.1|
           predicted protein [Populus trichocarpa]
          Length = 141

 Score =  157 bits (398), Expect = 2e-36
 Identities = 83/144 (57%), Positives = 102/144 (70%), Gaps = 1/144 (0%)
 Frame = -3

Query: 747 PRNWSSARFTNLVNDNFXXXXXXXXXXXXXXXXXXXXXXLVRFVQNMFRKISKRARKAVR 568
           PRNWS +     +N +F                      LVRF+ N+F+K+SKRARKAVR
Sbjct: 3   PRNWSRS-----INSDFADDHEDGGDDDEAEEEDRSLDLLVRFISNVFKKVSKRARKAVR 57

Query: 567 SVLPVSISTKLVGFSVNGVIILAFLWVLKAFLEVVCTFGSLVFVSILLIRGTWSGISYLQ 388
           SVLPV ISTKLV FSVNGV++LAFLWVLKAFLEVVCT GS+VFVSILLIRG WSG++YLQ
Sbjct: 58  SVLPVPISTKLVEFSVNGVLLLAFLWVLKAFLEVVCTLGSMVFVSILLIRGIWSGVTYLQ 117

Query: 387 DTRH-RNSNIDGENSVWTGAQPAS 319
           + R+ R + +D ++  WTG QPA+
Sbjct: 118 ERRNLRINELDDDHRAWTGTQPAA 141


>ref|XP_002276036.1| PREDICTED: uncharacterized protein LOC100251465 [Vitis vinifera]
           gi|297736403|emb|CBI25126.3| unnamed protein product
           [Vitis vinifera]
          Length = 203

 Score =  149 bits (377), Expect = 5e-34
 Identities = 79/156 (50%), Positives = 103/156 (66%), Gaps = 1/156 (0%)
 Frame = -3

Query: 783 HYYTRDAGIIIDPRNWSSARFTNLVNDNFXXXXXXXXXXXXXXXXXXXXXXLVRFVQNMF 604
           H+      ++ DPRNW+  R  ++V   +                       VRFVQN+F
Sbjct: 51  HFSQEGDHLVDDPRNWTRNR--SVVAGEYGDDEDEDDEDDEEEEDRSLDLL-VRFVQNVF 107

Query: 603 RKISKRARKAVRSVLPVSISTKLVGFSVNGVIILAFLWVLKAFLEVVCTFGSLVFVSILL 424
           +KISKR RKAVRSVLPV ISTKLVGFSV+GV++L FLWVLKAFLEV+CT GS+VFVSIL+
Sbjct: 108 KKISKRTRKAVRSVLPVPISTKLVGFSVDGVLMLTFLWVLKAFLEVICTLGSVVFVSILV 167

Query: 423 IRGTWSGISYLQDTR-HRNSNIDGENSVWTGAQPAS 319
           IRG W+G+SY+Q+ R H  + +  ++  WTG QP +
Sbjct: 168 IRGIWTGVSYVQENRNHTGNELGDDHRAWTGTQPTT 203


>ref|XP_004159921.1| PREDICTED: uncharacterized LOC101213497 [Cucumis sativus]
          Length = 202

 Score =  149 bits (376), Expect = 7e-34
 Identities = 77/105 (73%), Positives = 88/105 (83%), Gaps = 2/105 (1%)
 Frame = -3

Query: 627 VRFVQNMFRKISKRARKAVRSVLPVSISTKLVGFSVNGVIILAFLWVLKAFLEVVCTFGS 448
           VRFV+N+FRK S+RARKAVRSVLP SI TKLV FSVNGV++LAFLWVLKAFLEV+CT G+
Sbjct: 98  VRFVENIFRKSSRRARKAVRSVLPPSIPTKLVAFSVNGVLMLAFLWVLKAFLEVICTLGT 157

Query: 447 LVFVSILLIRGTWSGISYLQDTR-HRNSNI-DGENSVWTGAQPAS 319
            VFVSIL+IRG W GI YLQDTR HR   + D ++  WTGAQPAS
Sbjct: 158 AVFVSILIIRGVWIGILYLQDTRSHRLGQLDDDQHHAWTGAQPAS 202


>ref|XP_004136931.1| PREDICTED: uncharacterized protein LOC101213497 [Cucumis sativus]
          Length = 200

 Score =  149 bits (376), Expect = 7e-34
 Identities = 77/105 (73%), Positives = 88/105 (83%), Gaps = 2/105 (1%)
 Frame = -3

Query: 627 VRFVQNMFRKISKRARKAVRSVLPVSISTKLVGFSVNGVIILAFLWVLKAFLEVVCTFGS 448
           VRFV+N+FRK S+RARKAVRSVLP SI TKLV FSVNGV++LAFLWVLKAFLEV+CT G+
Sbjct: 96  VRFVENIFRKSSRRARKAVRSVLPPSIPTKLVAFSVNGVLMLAFLWVLKAFLEVICTLGT 155

Query: 447 LVFVSILLIRGTWSGISYLQDTR-HRNSNI-DGENSVWTGAQPAS 319
            VFVSIL+IRG W GI YLQDTR HR   + D ++  WTGAQPAS
Sbjct: 156 AVFVSILIIRGVWIGILYLQDTRSHRLGQLDDDQHHAWTGAQPAS 200


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