BLASTX nr result

ID: Coptis23_contig00008274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008274
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM64494.1| glycyl tRNA synthetase, putative [Arabidopsis tha...    79   5e-13
dbj|BAE98387.1| glycyl-tRNA synthetase [Arabidopsis thaliana]          79   5e-13
ref|NP_564337.1| glycyl-tRNA synthetase 1 [Arabidopsis thaliana]...    79   5e-13
ref|XP_002893587.1| glycyl-tRNA synthetase [Arabidopsis lyrata s...    78   7e-13
gb|AAK92832.1| putative glycyl tRNA synthetase [Arabidopsis thal...    78   9e-13

>gb|AAM64494.1| glycyl tRNA synthetase, putative [Arabidopsis thaliana]
          Length = 690

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 41/62 (66%), Positives = 52/62 (83%)
 Frame = -1

Query: 186 LRRSLSEKQSSLDSQAQAVRDLKANKADKSEINLAVEALNSLKLEKSSVEKELQSIMSSN 7
           LR+SLSEK SS+++Q  AVR LKA++A K EI+ A+E LN LKLEKS+VEKELQSI+SS+
Sbjct: 8   LRQSLSEKSSSVEAQGNAVRALKASRAAKPEIDAAIEQLNKLKLEKSTVEKELQSIISSS 67

Query: 6   NN 1
            N
Sbjct: 68  GN 69


>dbj|BAE98387.1| glycyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 519

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 41/62 (66%), Positives = 52/62 (83%)
 Frame = -1

Query: 186 LRRSLSEKQSSLDSQAQAVRDLKANKADKSEINLAVEALNSLKLEKSSVEKELQSIMSSN 7
           LR+SLSEK SS+++Q  AVR LKA++A K EI+ A+E LN LKLEKS+VEKELQSI+SS+
Sbjct: 8   LRQSLSEKSSSVEAQGNAVRALKASRAAKPEIDAAIEQLNKLKLEKSTVEKELQSIISSS 67

Query: 6   NN 1
            N
Sbjct: 68  GN 69


>ref|NP_564337.1| glycyl-tRNA synthetase 1 [Arabidopsis thaliana]
           gi|3334349|sp|O23627.1|SYGM1_ARATH RecName:
           Full=Glycine--tRNA ligase 1, mitochondrial; AltName:
           Full=Diadenosine tetraphosphate synthetase; Short=AP-4-A
           synthetase; AltName: Full=Glycyl-tRNA synthetase 1;
           Short=GlyRS 1; Flags: Precursor
           gi|9972358|gb|AAG10608.1|AC008030_8 glycyl-tRNA
           synthetase [Arabidopsis thaliana]
           gi|2564215|emb|CAA05162.1| glycyl-tRNA synthetase
           [Arabidopsis thaliana] gi|332193024|gb|AEE31145.1|
           glycyl-tRNA synthetase 1 [Arabidopsis thaliana]
          Length = 729

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 41/62 (66%), Positives = 52/62 (83%)
 Frame = -1

Query: 186 LRRSLSEKQSSLDSQAQAVRDLKANKADKSEINLAVEALNSLKLEKSSVEKELQSIMSSN 7
           LR+SLSEK SS+++Q  AVR LKA++A K EI+ A+E LN LKLEKS+VEKELQSI+SS+
Sbjct: 47  LRQSLSEKSSSVEAQGNAVRALKASRAAKPEIDAAIEQLNKLKLEKSTVEKELQSIISSS 106

Query: 6   NN 1
            N
Sbjct: 107 GN 108


>ref|XP_002893587.1| glycyl-tRNA synthetase [Arabidopsis lyrata subsp. lyrata]
           gi|297339429|gb|EFH69846.1| glycyl-tRNA synthetase
           [Arabidopsis lyrata subsp. lyrata]
          Length = 730

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 41/62 (66%), Positives = 52/62 (83%)
 Frame = -1

Query: 186 LRRSLSEKQSSLDSQAQAVRDLKANKADKSEINLAVEALNSLKLEKSSVEKELQSIMSSN 7
           LR+SLSEK SS+++Q  AVR LKA++A K EI+ A+E LN LKLEKS+VEKELQSI+SS+
Sbjct: 48  LRQSLSEKSSSVEAQGNAVRALKASRAAKPEIDAAIEQLNRLKLEKSAVEKELQSIISSS 107

Query: 6   NN 1
            N
Sbjct: 108 GN 109


>gb|AAK92832.1| putative glycyl tRNA synthetase [Arabidopsis thaliana]
          Length = 729

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 41/62 (66%), Positives = 52/62 (83%)
 Frame = -1

Query: 186 LRRSLSEKQSSLDSQAQAVRDLKANKADKSEINLAVEALNSLKLEKSSVEKELQSIMSSN 7
           LR+SLSEK SS+++Q  AVR LKA++A K EI+ A+E LN LKLEKS+VEKELQSI+SS+
Sbjct: 47  LRQSLSEKSSSVEAQGNAVRALKASRAAKPEIDAAMEQLNKLKLEKSTVEKELQSIISSS 106

Query: 6   NN 1
            N
Sbjct: 107 GN 108


Top