BLASTX nr result
ID: Coptis23_contig00008274
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00008274 (252 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAM64494.1| glycyl tRNA synthetase, putative [Arabidopsis tha... 79 5e-13 dbj|BAE98387.1| glycyl-tRNA synthetase [Arabidopsis thaliana] 79 5e-13 ref|NP_564337.1| glycyl-tRNA synthetase 1 [Arabidopsis thaliana]... 79 5e-13 ref|XP_002893587.1| glycyl-tRNA synthetase [Arabidopsis lyrata s... 78 7e-13 gb|AAK92832.1| putative glycyl tRNA synthetase [Arabidopsis thal... 78 9e-13 >gb|AAM64494.1| glycyl tRNA synthetase, putative [Arabidopsis thaliana] Length = 690 Score = 78.6 bits (192), Expect = 5e-13 Identities = 41/62 (66%), Positives = 52/62 (83%) Frame = -1 Query: 186 LRRSLSEKQSSLDSQAQAVRDLKANKADKSEINLAVEALNSLKLEKSSVEKELQSIMSSN 7 LR+SLSEK SS+++Q AVR LKA++A K EI+ A+E LN LKLEKS+VEKELQSI+SS+ Sbjct: 8 LRQSLSEKSSSVEAQGNAVRALKASRAAKPEIDAAIEQLNKLKLEKSTVEKELQSIISSS 67 Query: 6 NN 1 N Sbjct: 68 GN 69 >dbj|BAE98387.1| glycyl-tRNA synthetase [Arabidopsis thaliana] Length = 519 Score = 78.6 bits (192), Expect = 5e-13 Identities = 41/62 (66%), Positives = 52/62 (83%) Frame = -1 Query: 186 LRRSLSEKQSSLDSQAQAVRDLKANKADKSEINLAVEALNSLKLEKSSVEKELQSIMSSN 7 LR+SLSEK SS+++Q AVR LKA++A K EI+ A+E LN LKLEKS+VEKELQSI+SS+ Sbjct: 8 LRQSLSEKSSSVEAQGNAVRALKASRAAKPEIDAAIEQLNKLKLEKSTVEKELQSIISSS 67 Query: 6 NN 1 N Sbjct: 68 GN 69 >ref|NP_564337.1| glycyl-tRNA synthetase 1 [Arabidopsis thaliana] gi|3334349|sp|O23627.1|SYGM1_ARATH RecName: Full=Glycine--tRNA ligase 1, mitochondrial; AltName: Full=Diadenosine tetraphosphate synthetase; Short=AP-4-A synthetase; AltName: Full=Glycyl-tRNA synthetase 1; Short=GlyRS 1; Flags: Precursor gi|9972358|gb|AAG10608.1|AC008030_8 glycyl-tRNA synthetase [Arabidopsis thaliana] gi|2564215|emb|CAA05162.1| glycyl-tRNA synthetase [Arabidopsis thaliana] gi|332193024|gb|AEE31145.1| glycyl-tRNA synthetase 1 [Arabidopsis thaliana] Length = 729 Score = 78.6 bits (192), Expect = 5e-13 Identities = 41/62 (66%), Positives = 52/62 (83%) Frame = -1 Query: 186 LRRSLSEKQSSLDSQAQAVRDLKANKADKSEINLAVEALNSLKLEKSSVEKELQSIMSSN 7 LR+SLSEK SS+++Q AVR LKA++A K EI+ A+E LN LKLEKS+VEKELQSI+SS+ Sbjct: 47 LRQSLSEKSSSVEAQGNAVRALKASRAAKPEIDAAIEQLNKLKLEKSTVEKELQSIISSS 106 Query: 6 NN 1 N Sbjct: 107 GN 108 >ref|XP_002893587.1| glycyl-tRNA synthetase [Arabidopsis lyrata subsp. lyrata] gi|297339429|gb|EFH69846.1| glycyl-tRNA synthetase [Arabidopsis lyrata subsp. lyrata] Length = 730 Score = 78.2 bits (191), Expect = 7e-13 Identities = 41/62 (66%), Positives = 52/62 (83%) Frame = -1 Query: 186 LRRSLSEKQSSLDSQAQAVRDLKANKADKSEINLAVEALNSLKLEKSSVEKELQSIMSSN 7 LR+SLSEK SS+++Q AVR LKA++A K EI+ A+E LN LKLEKS+VEKELQSI+SS+ Sbjct: 48 LRQSLSEKSSSVEAQGNAVRALKASRAAKPEIDAAIEQLNRLKLEKSAVEKELQSIISSS 107 Query: 6 NN 1 N Sbjct: 108 GN 109 >gb|AAK92832.1| putative glycyl tRNA synthetase [Arabidopsis thaliana] Length = 729 Score = 77.8 bits (190), Expect = 9e-13 Identities = 41/62 (66%), Positives = 52/62 (83%) Frame = -1 Query: 186 LRRSLSEKQSSLDSQAQAVRDLKANKADKSEINLAVEALNSLKLEKSSVEKELQSIMSSN 7 LR+SLSEK SS+++Q AVR LKA++A K EI+ A+E LN LKLEKS+VEKELQSI+SS+ Sbjct: 47 LRQSLSEKSSSVEAQGNAVRALKASRAAKPEIDAAMEQLNKLKLEKSTVEKELQSIISSS 106 Query: 6 NN 1 N Sbjct: 107 GN 108