BLASTX nr result

ID: Coptis23_contig00008268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008268
         (862 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15188.3| unnamed protein product [Vitis vinifera]              320   3e-85
ref|XP_002284602.1| PREDICTED: vesicle transport v-SNARE 13 [Vit...   320   3e-85
gb|ABB29948.1| vesicle transport v-SNARE 11-like [Solanum tubero...   313   3e-83
ref|XP_002530011.1| vesicle transport V-snare protein vti1a, put...   313   4e-83
gb|ABA40452.1| unknown [Solanum tuberosum]                            310   2e-82

>emb|CBI15188.3| unnamed protein product [Vitis vinifera]
          Length = 279

 Score =  320 bits (820), Expect = 3e-85
 Identities = 164/198 (82%), Positives = 183/198 (92%), Gaps = 2/198 (1%)
 Frame = -3

Query: 725 MSEVFEGYERQYCELSANLSKKCTSASLLDGEQKKQKITEIKTGIEDAEALIRKMDLEAR 546
           MS+VFEGYERQYCELSANLS+KCT+ASLL+GEQKKQK++EIK G++DA+ALIRKMDLEAR
Sbjct: 59  MSQVFEGYERQYCELSANLSRKCTAASLLNGEQKKQKVSEIKAGLDDADALIRKMDLEAR 118

Query: 545 SLQPSVKAMLLAKLREYKSDLNNLKTEVKKVTSAS--QGSREELLESGLADTKMVSADQK 372
           SLQPSVKAMLLAKLREYK+DLNN+K EVK++TSA+  Q +R+ LLESG+ADT  VSADQK
Sbjct: 119 SLQPSVKAMLLAKLREYKTDLNNVKNEVKRITSANTNQAARDNLLESGMADTMTVSADQK 178

Query: 371 GRLLMSTERLNQSSDRIKESRRTMLETEELGVSILQDLHNQRQSLLHAGNTLHGVDDYIG 192
            RLLMST RLNQS DRIKESRRTMLETEELGVSILQDLH QRQSLLHA NTLHGVDD I 
Sbjct: 179 TRLLMSTGRLNQSGDRIKESRRTMLETEELGVSILQDLHQQRQSLLHAHNTLHGVDDNIS 238

Query: 191 KSKKVLTAMSRRMTRNKW 138
           KSKK+LTAMSRRM+RNKW
Sbjct: 239 KSKKILTAMSRRMSRNKW 256


>ref|XP_002284602.1| PREDICTED: vesicle transport v-SNARE 13 [Vitis vinifera]
          Length = 221

 Score =  320 bits (820), Expect = 3e-85
 Identities = 164/198 (82%), Positives = 183/198 (92%), Gaps = 2/198 (1%)
 Frame = -3

Query: 725 MSEVFEGYERQYCELSANLSKKCTSASLLDGEQKKQKITEIKTGIEDAEALIRKMDLEAR 546
           MS+VFEGYERQYCELSANLS+KCT+ASLL+GEQKKQK++EIK G++DA+ALIRKMDLEAR
Sbjct: 1   MSQVFEGYERQYCELSANLSRKCTAASLLNGEQKKQKVSEIKAGLDDADALIRKMDLEAR 60

Query: 545 SLQPSVKAMLLAKLREYKSDLNNLKTEVKKVTSAS--QGSREELLESGLADTKMVSADQK 372
           SLQPSVKAMLLAKLREYK+DLNN+K EVK++TSA+  Q +R+ LLESG+ADT  VSADQK
Sbjct: 61  SLQPSVKAMLLAKLREYKTDLNNVKNEVKRITSANTNQAARDNLLESGMADTMTVSADQK 120

Query: 371 GRLLMSTERLNQSSDRIKESRRTMLETEELGVSILQDLHNQRQSLLHAGNTLHGVDDYIG 192
            RLLMST RLNQS DRIKESRRTMLETEELGVSILQDLH QRQSLLHA NTLHGVDD I 
Sbjct: 121 TRLLMSTGRLNQSGDRIKESRRTMLETEELGVSILQDLHQQRQSLLHAHNTLHGVDDNIS 180

Query: 191 KSKKVLTAMSRRMTRNKW 138
           KSKK+LTAMSRRM+RNKW
Sbjct: 181 KSKKILTAMSRRMSRNKW 198


>gb|ABB29948.1| vesicle transport v-SNARE 11-like [Solanum tuberosum]
          Length = 221

 Score =  313 bits (802), Expect = 3e-83
 Identities = 157/198 (79%), Positives = 183/198 (92%), Gaps = 2/198 (1%)
 Frame = -3

Query: 725 MSEVFEGYERQYCELSANLSKKCTSASLLDGEQKKQKITEIKTGIEDAEALIRKMDLEAR 546
           MS+VFEGYERQYCELSANL+KKC SA++LDGEQKKQK++EIK G++DAEALIRKMDLEAR
Sbjct: 1   MSQVFEGYERQYCELSANLTKKCNSATILDGEQKKQKVSEIKAGLDDAEALIRKMDLEAR 60

Query: 545 SLQPSVKAMLLAKLREYKSDLNNLKTEVKKVTS--ASQGSREELLESGLADTKMVSADQK 372
           SL P+VKA LLAKLREYKSDLNNLKTEVK++TS  A+Q +R+ELLESG+AD  MVSADQ+
Sbjct: 61  SLPPNVKATLLAKLREYKSDLNNLKTEVKRITSGNANQAARDELLESGMADANMVSADQR 120

Query: 371 GRLLMSTERLNQSSDRIKESRRTMLETEELGVSILQDLHNQRQSLLHAGNTLHGVDDYIG 192
            RL+MSTERLN+SSDRI++SR+TMLETE+LGVSILQDLH QRQSLLHA +TLHGVDD I 
Sbjct: 121 QRLMMSTERLNRSSDRIRDSRKTMLETEDLGVSILQDLHQQRQSLLHAHDTLHGVDDNIS 180

Query: 191 KSKKVLTAMSRRMTRNKW 138
           +SKK+LT MSRRM+RNKW
Sbjct: 181 RSKKILTTMSRRMSRNKW 198


>ref|XP_002530011.1| vesicle transport V-snare protein vti1a, putative [Ricinus
           communis] gi|223530490|gb|EEF32373.1| vesicle transport
           V-snare protein vti1a, putative [Ricinus communis]
          Length = 220

 Score =  313 bits (801), Expect = 4e-83
 Identities = 158/198 (79%), Positives = 179/198 (90%), Gaps = 2/198 (1%)
 Frame = -3

Query: 725 MSEVFEGYERQYCELSANLSKKCTSASLLDGEQKKQKITEIKTGIEDAEALIRKMDLEAR 546
           MSEVFEGYERQYCELSANLS+KCT+A  LDGEQKKQK++E+K G+EDAE+LIRKMDLEAR
Sbjct: 1   MSEVFEGYERQYCELSANLSRKCTTAGALDGEQKKQKLSEVKAGLEDAESLIRKMDLEAR 60

Query: 545 SLQPSVKAMLLAKLREYKSDLNNLKTEVKKVTSASQGS--REELLESGLADTKMVSADQK 372
           SLQP+VKA+LLAKLREYKSDLNNLK+EVK++ S +  S  R+ELLESG+AD    SADQ+
Sbjct: 61  SLQPNVKAVLLAKLREYKSDLNNLKSEVKRIASGNLNSAARDELLESGMADALTASADQR 120

Query: 371 GRLLMSTERLNQSSDRIKESRRTMLETEELGVSILQDLHNQRQSLLHAGNTLHGVDDYIG 192
            RL+M+TERLN SSDR+K+SRRTMLETEELGVSILQDLH QRQSLLHA NTLHGVDD IG
Sbjct: 121 SRLMMTTERLNHSSDRVKDSRRTMLETEELGVSILQDLHQQRQSLLHAHNTLHGVDDNIG 180

Query: 191 KSKKVLTAMSRRMTRNKW 138
           KSKKVLTAM+RRM RNKW
Sbjct: 181 KSKKVLTAMARRMNRNKW 198


>gb|ABA40452.1| unknown [Solanum tuberosum]
          Length = 221

 Score =  310 bits (795), Expect = 2e-82
 Identities = 156/198 (78%), Positives = 182/198 (91%), Gaps = 2/198 (1%)
 Frame = -3

Query: 725 MSEVFEGYERQYCELSANLSKKCTSASLLDGEQKKQKITEIKTGIEDAEALIRKMDLEAR 546
           MS+VFEGYERQYCELSANL+KKC SA++LDGEQKKQK++EIK G++DAEALIRKMDLEAR
Sbjct: 1   MSQVFEGYERQYCELSANLTKKCNSATILDGEQKKQKVSEIKAGLDDAEALIRKMDLEAR 60

Query: 545 SLQPSVKAMLLAKLREYKSDLNNLKTEVKKVTS--ASQGSREELLESGLADTKMVSADQK 372
           SL P+VKA LLAKLREYKSDLNNLKTEVK++TS  A+Q +R+ELLESG+AD  MVSADQ+
Sbjct: 61  SLPPNVKATLLAKLREYKSDLNNLKTEVKRITSGNANQAARDELLESGMADANMVSADQR 120

Query: 371 GRLLMSTERLNQSSDRIKESRRTMLETEELGVSILQDLHNQRQSLLHAGNTLHGVDDYIG 192
            RL+MSTERLN+SS RI++SR+TMLETE+LGVSILQDLH QRQSLLHA +TLHGVDD I 
Sbjct: 121 QRLMMSTERLNRSSGRIRDSRKTMLETEDLGVSILQDLHQQRQSLLHAHDTLHGVDDNIS 180

Query: 191 KSKKVLTAMSRRMTRNKW 138
           +SKK+LT MSRRM+RNKW
Sbjct: 181 RSKKILTTMSRRMSRNKW 198


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