BLASTX nr result

ID: Coptis23_contig00008263 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008263
         (1721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80884.1| hypothetical protein VITISV_018653 [Vitis vinifera]   314   5e-83
emb|CBI16416.3| unnamed protein product [Vitis vinifera]              308   2e-81
ref|XP_002277274.1| PREDICTED: transcription factor bHLH130-like...   301   4e-79
emb|CAN62935.1| hypothetical protein VITISV_008845 [Vitis vinifera]   301   4e-79
ref|XP_002314023.1| predicted protein [Populus trichocarpa] gi|2...   294   4e-77

>emb|CAN80884.1| hypothetical protein VITISV_018653 [Vitis vinifera]
          Length = 446

 Score =  314 bits (804), Expect = 5e-83
 Identities = 204/445 (45%), Positives = 257/445 (57%), Gaps = 51/445 (11%)
 Frame = -2

Query: 1666 MDGNLLRXXXXXXQLNSGLLRYRSAPSSMLANFM--EDDEFLVSHH------------RS 1529
            M+ NL        Q+NS L+RYRSAPSS  +NF+  ED E  + H             R 
Sbjct: 1    MESNLQHHQHQQQQMNSSLMRYRSAPSSYFSNFIDGEDCEEFLQHRPSSPETERIFSSRP 60

Query: 1528 SSPEAESMFARFMNCDSSPTEKS----------------TIIKAEVSNR---SSNHYMGV 1406
            SSPE E +F+RFM    +    S                +++     N+   S  H   V
Sbjct: 61   SSPETERIFSRFMASGGTEDSSSHTVMNMRQNSQAMAPESVVVVSQQNQFMASMKHGAEV 120

Query: 1405 IDEEETE-------QIMYHTPAXXXXXXXXXXPMSNHGS---NVAENVYRVASSVGLDQQ 1256
            + +++ +       Q+MY T +           M +H S      EN Y   SS+G+DQ 
Sbjct: 121  LQQQQQQNGYASGSQMMYQTSSP----------MPHHNSAAPGTVENSYSAVSSMGMDQ- 169

Query: 1255 ASPVKMGSGNGSNLVRHSSSPAGLFANINVENGYAVMRGIGNFRVGNNGNGEAS-PSTSR 1079
            +   K+G GN SNL+RHSSSPAGLF+++NVENGYA+MRG+GNF  G+  NGE S  S SR
Sbjct: 170  SQQXKIGGGNNSNLIRHSSSPAGLFSHLNVENGYAIMRGMGNFGSGSGTNGEPSFSSASR 229

Query: 1078 LKNQINFXXXXXXXXGLMXXXXXXXXXXXXXXSAECGSLASGNVSSH-YTPNYSVGSWDD 902
            LK QINF        GL+              S + GS   G+ +S  +   + +GSWDD
Sbjct: 230  LKGQINFSSGPPSSSGLVTPISEMGNKSMGTGSPDNGSFGEGHSNSGGFITGFPIGSWDD 289

Query: 901  STL--ENFPNVKRVRDVNPNMLSGLKSSEDQLPEAGNQTRNLTHHFSLP-KTSAEMAAI- 734
            S +  E+F ++K VRD      SGL +SE Q  E  N+   L HH SLP KTSA++  I 
Sbjct: 290  SAIMSESFSSLKSVRDDEAKTFSGLNASEAQKGEPANRPPVLAHHLSLPTKTSADLTTIE 349

Query: 733  --LQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLD 560
              LQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNT+DMLD
Sbjct: 350  KYLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLD 409

Query: 559  LAVEYIKELQKEVKKLNDNRANCTC 485
            LAV+YIK+LQK+VK+ N  +A   C
Sbjct: 410  LAVDYIKDLQKQVKR-NRKKAAIKC 433


>emb|CBI16416.3| unnamed protein product [Vitis vinifera]
          Length = 297

 Score =  308 bits (790), Expect = 2e-81
 Identities = 173/298 (58%), Positives = 207/298 (69%), Gaps = 11/298 (3%)
 Frame = -2

Query: 1327 MSNHGS---NVAENVYRVASSVGLDQQASPVKMGSGNGSNLVRHSSSPAGLFANINVENG 1157
            M +H S      EN Y   SS+G+DQ +  +K+G GN SNL+RHSSSPAGLF+++NVENG
Sbjct: 1    MPHHNSAAPGTVENSYSAVSSMGMDQ-SQQIKIGGGNNSNLIRHSSSPAGLFSHLNVENG 59

Query: 1156 YAVMRGIGNFRVGNNGNGEAS-PSTSRLKNQINFXXXXXXXXGLMXXXXXXXXXXXXXXS 980
            YA+MRG+GNF  G+  NGE S  S SRLK QINF        GL+              S
Sbjct: 60   YAIMRGMGNFGSGSGTNGEPSFSSASRLKGQINFSSGPPSSSGLVTPISEMGNKSMGTGS 119

Query: 979  AECGSLASGNVSSH-YTPNYSVGSWDDSTL--ENFPNVKRVRDVNPNMLSGLKSSEDQLP 809
             + GS   G+ +S  +   + +GSWDDS +  E+F ++K VRD      SGL +SE Q  
Sbjct: 120  PDNGSFGEGHSNSGGFITGFPIGSWDDSAIMSESFSSLKSVRDDEAKTFSGLNASEAQKG 179

Query: 808  EAGNQTRNLTHHFSLP-KTSAEMAAI---LQFQDSVPCKIRAKRGCATHPRSIAERVRRT 641
            E  N+   L HH SLP KTSA++  I   LQFQDSVPCKIRAKRGCATHPRSIAERVRRT
Sbjct: 180  EPANRPPVLAHHLSLPTKTSADLTTIEKYLQFQDSVPCKIRAKRGCATHPRSIAERVRRT 239

Query: 640  RISERMRKLQELVPNMDKQTNTADMLDLAVEYIKELQKEVKKLNDNRANCTCSSKQSP 467
            RISERMRKLQELVPNMDKQTNT+DMLDLAV+YIK+LQK+VK L+DNRA CTCS+KQ P
Sbjct: 240  RISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQVKTLSDNRAKCTCSNKQKP 297


>ref|XP_002277274.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
          Length = 405

 Score =  301 bits (771), Expect = 4e-79
 Identities = 186/394 (47%), Positives = 236/394 (59%), Gaps = 9/394 (2%)
 Frame = -2

Query: 1621 NSGLLRYRSAPSSMLANFMEDDEFLVSHHRSSSPEAESMFARFMNC----DSSPTEKSTI 1454
            NSGLLR+RSAPSS+LANF +  + +   H+ ++   +    RFM C    DS+ + +S +
Sbjct: 53   NSGLLRFRSAPSSLLANFTDSGDGV---HKGANLCDDFESERFMPCGGFQDSAMSCQSQL 109

Query: 1453 IKAEVSNRSSNHYMGVIDEEETEQIMYHTPAXXXXXXXXXXPMSNHGSNVAENVYRVASS 1274
                    SS                                     S+  +  Y V +S
Sbjct: 110  PPQYPRQSSST-----------------------------------SSSAMDGSYGVVNS 134

Query: 1273 VGLDQQASPVKMGSGNGSNLVRHSSSPAGLFANINVENGYAVMRGIGNFRVGNNGNGEAS 1094
              ++ +          GS+LVR SSSPAGLF++++ +NGYA+MRG+GNFR GN GNGE S
Sbjct: 135  NNMEAK---------QGSSLVRQSSSPAGLFSHLSGQNGYAIMRGVGNFRPGNVGNGEIS 185

Query: 1093 PSTSRLKNQINFXXXXXXXXGLMXXXXXXXXXXXXXXSAECGSLASGNVSSH-YTPNYSV 917
            PSTSRLK Q++F        GL+              S     LA+ N  +  Y+P +  
Sbjct: 186  PSTSRLKPQVSFSSGLPSSLGLLPQISEIGSECIQASSPNDRKLANSNGDARFYSPGFPY 245

Query: 916  GSWDDST-LENFPNVKRVRDVNPNMLSGLKSSEDQLPEAGNQTRNLTHHFSLPKTSAEMA 740
            GSW+DS   ENF  +KR +D +  + SG  +S  +  E G++++ L+HH SLPKTSAEMA
Sbjct: 246  GSWNDSAHFENFSGMKRDQDNDGKLYSGSNTSGIRNEEFGHRSQILSHHLSLPKTSAEMA 305

Query: 739  AI---LQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTAD 569
            A+   LQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTAD
Sbjct: 306  AMEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTAD 365

Query: 568  MLDLAVEYIKELQKEVKKLNDNRANCTCSSKQSP 467
            MLDLAVEYIK+LQK+   L DNRA+C C  KQ P
Sbjct: 366  MLDLAVEYIKDLQKQYNTLTDNRAHCKCLGKQKP 399


>emb|CAN62935.1| hypothetical protein VITISV_008845 [Vitis vinifera]
          Length = 394

 Score =  301 bits (771), Expect = 4e-79
 Identities = 186/394 (47%), Positives = 236/394 (59%), Gaps = 9/394 (2%)
 Frame = -2

Query: 1621 NSGLLRYRSAPSSMLANFMEDDEFLVSHHRSSSPEAESMFARFMNC----DSSPTEKSTI 1454
            NSGLLR+RSAPSS+LANF +  + +   H+ ++   +    RFM C    DS+ + +S +
Sbjct: 42   NSGLLRFRSAPSSLLANFTDSGDGV---HKGANLCDDFESERFMPCGGFQDSAMSCQSQL 98

Query: 1453 IKAEVSNRSSNHYMGVIDEEETEQIMYHTPAXXXXXXXXXXPMSNHGSNVAENVYRVASS 1274
                    SS                                     S+  +  Y V +S
Sbjct: 99   PPQYPRQSSST-----------------------------------SSSAMDGSYGVVNS 123

Query: 1273 VGLDQQASPVKMGSGNGSNLVRHSSSPAGLFANINVENGYAVMRGIGNFRVGNNGNGEAS 1094
              ++ +          GS+LVR SSSPAGLF++++ +NGYA+MRG+GNFR GN GNGE S
Sbjct: 124  NNMEAK---------QGSSLVRQSSSPAGLFSHLSGQNGYAIMRGVGNFRPGNVGNGEIS 174

Query: 1093 PSTSRLKNQINFXXXXXXXXGLMXXXXXXXXXXXXXXSAECGSLASGNVSSH-YTPNYSV 917
            PSTSRLK Q++F        GL+              S     LA+ N  +  Y+P +  
Sbjct: 175  PSTSRLKPQVSFSSGLPSSLGLLPQISEIGSECIQASSPNDRKLANSNGDARFYSPGFPY 234

Query: 916  GSWDDST-LENFPNVKRVRDVNPNMLSGLKSSEDQLPEAGNQTRNLTHHFSLPKTSAEMA 740
            GSW+DS   ENF  +KR +D +  + SG  +S  +  E G++++ L+HH SLPKTSAEMA
Sbjct: 235  GSWNDSAHFENFSGMKRDQDNDGKLYSGSNTSGIRNEEFGHRSQILSHHLSLPKTSAEMA 294

Query: 739  AI---LQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTAD 569
            A+   LQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTAD
Sbjct: 295  AMEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTAD 354

Query: 568  MLDLAVEYIKELQKEVKKLNDNRANCTCSSKQSP 467
            MLDLAVEYIK+LQK+   L DNRA+C C  KQ P
Sbjct: 355  MLDLAVEYIKDLQKQYNTLTDNRAHCKCLGKQKP 388


>ref|XP_002314023.1| predicted protein [Populus trichocarpa] gi|222850431|gb|EEE87978.1|
            predicted protein [Populus trichocarpa]
          Length = 421

 Score =  294 bits (753), Expect = 4e-77
 Identities = 185/405 (45%), Positives = 237/405 (58%), Gaps = 16/405 (3%)
 Frame = -2

Query: 1621 NSGLLRYRSAPSSMLANFME-----DDEFLVS----HHRSSSPEAESMFARFMNCDSSPT 1469
            NSGL+RYRSAPSS+L + +      D   + S    + RSSSPE ++M ARFM+  +   
Sbjct: 40   NSGLMRYRSAPSSILESLVNGTSGHDGGGIESGDYRYLRSSSPEMDTMLARFMSSCNGSG 99

Query: 1468 EKSTIIKAEVSNRSSNHYMGVIDEEETEQIMYHTPAXXXXXXXXXXPMSNHGSNVAENVY 1289
            + S+    E   R +    G   E   + +  H               S    N  ++ +
Sbjct: 100  DSSSQNLQEFGERPAIKQEGGDSEMVYQSLPGHNLVTDN---------SVSVGNSMDSAF 150

Query: 1288 RVASSVGLDQQASPVKMGSGNGSNLVRHSSSPAGLFANINVENGYAVMRGIGNFRVGNNG 1109
             V SS+ L+      KM + NGSNL R +SSPAGLF+++ V+NG+ VMR  G+FR GN  
Sbjct: 151  NVMSSMALENSMQATKMSTANGSNLARQNSSPAGLFSDLGVDNGFVVMREGGSFRAGNGT 210

Query: 1108 NGEASPSTSRLKNQINFXXXXXXXXGLMXXXXXXXXXXXXXXSAEC--GSLASGNVS-SH 938
            NGEASP T++L+  +NF         +                 EC  G    G+VS + 
Sbjct: 211  NGEASP-TNKLRRHVNFSSGQRMLPQIAEIGE------------ECIGGRSPEGDVSEAR 257

Query: 937  YTPNYSVGSWDDSTLENFPNVKRVRDVNPNMLSGLKSSEDQLPEAGNQTRNLTHHFSLPK 758
            Y   ++  SWD ++L     +KR RD + NM SGL + ++Q   +GN+   LTHH SLPK
Sbjct: 258  YMSRFTSDSWDGASLSG---LKRQRDNDGNMFSGLNTLDNQDGNSGNRVTGLTHHLSLPK 314

Query: 757  TSAEMAAILQFQD----SVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMD 590
            T +E A I +F D    SVPCKIRAKRG ATHPRSIAERVRRTRISERMRKLQEL PNMD
Sbjct: 315  TLSETATIEKFLDFQGNSVPCKIRAKRGFATHPRSIAERVRRTRISERMRKLQELFPNMD 374

Query: 589  KQTNTADMLDLAVEYIKELQKEVKKLNDNRANCTCSSKQSPY*IP 455
            KQTNTADMLDLAVE+IK+LQK+VK L D +A CTCSSKQ  Y  P
Sbjct: 375  KQTNTADMLDLAVEHIKDLQKQVKTLTDTKAKCTCSSKQKHYSSP 419


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