BLASTX nr result

ID: Coptis23_contig00008262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008262
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285835.1| PREDICTED: ubiquitin-fold modifier 1 [Vitis ...   168   5e-40
ref|XP_003544765.1| PREDICTED: ubiquitin-fold modifier 1-like [G...   166   1e-39
ref|XP_003523461.1| PREDICTED: ubiquitin-fold modifier 1-like [G...   164   5e-39
ref|XP_002519920.1| Ubiquitin-fold modifier 1 precursor, putativ...   164   5e-39
ref|XP_004140331.1| PREDICTED: ubiquitin-fold modifier 1-like [C...   164   7e-39

>ref|XP_002285835.1| PREDICTED: ubiquitin-fold modifier 1 [Vitis vinifera]
           gi|302141861|emb|CBI19064.3| unnamed protein product
           [Vitis vinifera]
          Length = 97

 Score =  168 bits (425), Expect = 5e-40
 Identities = 84/87 (96%), Positives = 86/87 (98%)
 Frame = +3

Query: 63  MAGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSQTSAIITNDGVGIN 242
           MAGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVP QTSAIITNDGVGIN
Sbjct: 1   MAGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGIN 60

Query: 243 PQQSAGNVFLKHGSDLRLIPRDRVGAW 323
           PQQSAGNVFLKHGS+LRLIPRDRVGA+
Sbjct: 61  PQQSAGNVFLKHGSELRLIPRDRVGAF 87


>ref|XP_003544765.1| PREDICTED: ubiquitin-fold modifier 1-like [Glycine max]
          Length = 94

 Score =  166 bits (421), Expect = 1e-39
 Identities = 82/88 (93%), Positives = 87/88 (98%)
 Frame = +3

Query: 66  AGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSQTSAIITNDGVGINP 245
           +GGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVP QTSAIITNDGVGINP
Sbjct: 3   SGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINP 62

Query: 246 QQSAGNVFLKHGSDLRLIPRDRVGAWKL 329
           QQSAGNVFLKHGS+LRLIPRDRVGA+++
Sbjct: 63  QQSAGNVFLKHGSELRLIPRDRVGAYEM 90


>ref|XP_003523461.1| PREDICTED: ubiquitin-fold modifier 1-like [Glycine max]
           gi|356515854|ref|XP_003526612.1| PREDICTED:
           ubiquitin-fold modifier 1 [Glycine max]
           gi|255627345|gb|ACU14017.1| unknown [Glycine max]
          Length = 88

 Score =  164 bits (416), Expect = 5e-39
 Identities = 82/85 (96%), Positives = 84/85 (98%)
 Frame = +3

Query: 69  GGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSQTSAIITNDGVGINPQ 248
           GGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVP QTSAIITNDGVGINPQ
Sbjct: 4   GGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQ 63

Query: 249 QSAGNVFLKHGSDLRLIPRDRVGAW 323
           QSAGNVFLKHGS+LRLIPRDRVGA+
Sbjct: 64  QSAGNVFLKHGSELRLIPRDRVGAF 88


>ref|XP_002519920.1| Ubiquitin-fold modifier 1 precursor, putative [Ricinus communis]
           gi|223540966|gb|EEF42524.1| Ubiquitin-fold modifier 1
           precursor, putative [Ricinus communis]
          Length = 92

 Score =  164 bits (416), Expect = 5e-39
 Identities = 83/87 (95%), Positives = 84/87 (96%)
 Frame = +3

Query: 60  SMAGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSQTSAIITNDGVGI 239
           S  GGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVP QTSAIITNDGVGI
Sbjct: 4   SGGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGI 63

Query: 240 NPQQSAGNVFLKHGSDLRLIPRDRVGA 320
           NPQQSAGNVFLKHGS+LRLIPRDRVGA
Sbjct: 64  NPQQSAGNVFLKHGSELRLIPRDRVGA 90


>ref|XP_004140331.1| PREDICTED: ubiquitin-fold modifier 1-like [Cucumis sativus]
           gi|449527113|ref|XP_004170557.1| PREDICTED:
           ubiquitin-fold modifier 1-like [Cucumis sativus]
          Length = 90

 Score =  164 bits (415), Expect = 7e-39
 Identities = 82/84 (97%), Positives = 83/84 (98%)
 Frame = +3

Query: 69  GGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSQTSAIITNDGVGINPQ 248
           GGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVP QTSAIITNDGVGINPQ
Sbjct: 6   GGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQ 65

Query: 249 QSAGNVFLKHGSDLRLIPRDRVGA 320
           QSAGNVFLKHGS+LRLIPRDRVGA
Sbjct: 66  QSAGNVFLKHGSELRLIPRDRVGA 89


Top