BLASTX nr result

ID: Coptis23_contig00008250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008250
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276879.2| PREDICTED: uncharacterized protein LOC100243...   211   2e-52
emb|CAN61366.1| hypothetical protein VITISV_020586 [Vitis vinifera]   209   5e-52
ref|XP_002529024.1| protein binding protein, putative [Ricinus c...   193   4e-47
emb|CBI26715.3| unnamed protein product [Vitis vinifera]              187   3e-45
emb|CBI28789.3| unnamed protein product [Vitis vinifera]              184   3e-44

>ref|XP_002276879.2| PREDICTED: uncharacterized protein LOC100243584 [Vitis vinifera]
          Length = 1260

 Score =  211 bits (536), Expect = 2e-52
 Identities = 119/269 (44%), Positives = 159/269 (59%), Gaps = 6/269 (2%)
 Frame = -2

Query: 858  SDKTSGAEVFSCVSATCGYFYHPECVAKLLSIGNDAEGEELRKRIAAGESFTCPIHICHI 679
            SDK+SGAEVF C +ATCG FYHP+CVAKLL   ++A  EEL+K I AGE F CPIH CH+
Sbjct: 295  SDKSSGAEVFLCANATCGRFYHPQCVAKLLHREDEAAAEELQKNIYAGELFACPIHRCHV 354

Query: 678  CKGRENKEVNELQFAVCRRCPRAYHRKCLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 499
            CK  E+K+  ELQFA+CRRCP++YHRKCLP                              
Sbjct: 355  CKQGEDKKDLELQFAICRRCPKSYHRKCLP-------------------RKISFEDLDEE 395

Query: 498  XXXXXXWEGLLPNNRVLIYCSKHEIDETLATPLRNHIIFP----RLEEKRKCFLDISSNS 331
                  W+GLLP NR+LIYC KHEIDE L TP+R+HI FP    ++E++R        + 
Sbjct: 396  GIIQRAWDGLLP-NRILIYCLKHEIDELLGTPIRDHIKFPNDEEKMEKRRSELFSSRKDL 454

Query: 330  GNVVAKKRLVVTEDFPSERIISATPKHFKKVFSNGNKAGPSRKRERPISRQELLYSSKLK 151
              VV+KKR +V+ED P ER+     K  +K+ S       ++K E+  S  +   S +LK
Sbjct: 455  DKVVSKKRSLVSEDSPRERMAVKATKQVEKLSSTVKDGDSTKKSEKRSSGPD--PSKRLK 512

Query: 150  PEDASRKSLKDSIQTVSVRV--SSADDES 70
                S+KSL D+++++S +V  SS  DE+
Sbjct: 513  VTGFSKKSLDDNVKSISKKVDKSSMADEN 541


>emb|CAN61366.1| hypothetical protein VITISV_020586 [Vitis vinifera]
          Length = 2238

 Score =  209 bits (533), Expect = 5e-52
 Identities = 118/269 (43%), Positives = 159/269 (59%), Gaps = 6/269 (2%)
 Frame = -2

Query: 858  SDKTSGAEVFSCVSATCGYFYHPECVAKLLSIGNDAEGEELRKRIAAGESFTCPIHICHI 679
            SDK+SGAEVF C +ATCG FYHP+CVAKLL   ++A  E+L+K I AGE F CPIH CH+
Sbjct: 940  SDKSSGAEVFLCANATCGRFYHPQCVAKLLHREDEAAAEDLQKNIYAGELFACPIHRCHV 999

Query: 678  CKGRENKEVNELQFAVCRRCPRAYHRKCLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 499
            CK  E+K+  ELQFA+CRRCP++YHRKCLP                              
Sbjct: 1000 CKQGEDKKDLELQFAICRRCPKSYHRKCLP-------------------RKISFEDLDEE 1040

Query: 498  XXXXXXWEGLLPNNRVLIYCSKHEIDETLATPLRNHIIFP----RLEEKRKCFLDISSNS 331
                  W+GLLP NR+LIYC KHEIDE L TP+R+HI FP    ++E++R        + 
Sbjct: 1041 GIIQRAWDGLLP-NRILIYCLKHEIDELLGTPIRDHIKFPNDEEKMEKRRSELFSSRKDL 1099

Query: 330  GNVVAKKRLVVTEDFPSERIISATPKHFKKVFSNGNKAGPSRKRERPISRQELLYSSKLK 151
              VV+KKR +V+ED P ER+     K  +K+ S       ++K E+  S  +   S +LK
Sbjct: 1100 DKVVSKKRSLVSEDSPRERMAVKATKQVEKLSSTVKDGDSTKKSEKRSSGPD--PSKRLK 1157

Query: 150  PEDASRKSLKDSIQTVSVRV--SSADDES 70
                S+KSL D+++++S +V  SS  DE+
Sbjct: 1158 VTGFSKKSLDDNVKSISKKVDKSSMADEN 1186


>ref|XP_002529024.1| protein binding protein, putative [Ricinus communis]
           gi|223531504|gb|EEF33335.1| protein binding protein,
           putative [Ricinus communis]
          Length = 1249

 Score =  193 bits (491), Expect = 4e-47
 Identities = 115/259 (44%), Positives = 151/259 (58%), Gaps = 3/259 (1%)
 Frame = -2

Query: 858 SDKTSGAEVFSCVSATCGYFYHPECVAKLLSIGNDAEGEELRKRIAAG-ESFTCPIHICH 682
           SDK SGAEVF C +ATCGYFYHP C+AKLL   ++   +EL+K+IAAG ESFTCPIH C 
Sbjct: 293 SDKLSGAEVFRCANATCGYFYHPSCIAKLLHQEDEVAAKELQKKIAAGKESFTCPIHKCC 352

Query: 681 ICKGRENKEVNELQFAVCRRCPRAYHRKCLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 502
           +CK  ENK++ ELQFAVCRRCP +YHRKC+P                             
Sbjct: 353 VCKQGENKKIRELQFAVCRRCPTSYHRKCMP--------------------SEIVFEKKK 392

Query: 501 XXXXXXXWEGLLPNNRVLIYCSKHEIDETLATPLRNHIIFPRLEEKRKCFL-DISSNSGN 325
                  WE LLP NR+LIYC KHEI + L TP+R+ I FP +EEK+K  + D+  +S  
Sbjct: 393 GEEEIRAWEDLLP-NRILIYCLKHEIIDYLGTPIRD-IRFPDIEEKKKTQISDLPGSSEK 450

Query: 324 VVAKKRLVVTED-FPSERIISATPKHFKKVFSNGNKAGPSRKRERPISRQELLYSSKLKP 148
            +AKKR + +ED F  + +I    K  K   S   K    +K E+       L   ++K 
Sbjct: 451 DLAKKRRLTSEDLFSGDAVI----KKVKDSSSGARKVTNIKKSEKLSPGSTFL--RRVKE 504

Query: 147 EDASRKSLKDSIQTVSVRV 91
            DASRKSLK+ +++ S+ +
Sbjct: 505 RDASRKSLKEKMKSTSIEL 523


>emb|CBI26715.3| unnamed protein product [Vitis vinifera]
          Length = 1201

 Score =  187 bits (474), Expect = 3e-45
 Identities = 110/252 (43%), Positives = 140/252 (55%), Gaps = 4/252 (1%)
 Frame = -2

Query: 858 SDKTSGAEVFSCVSATCGYFYHPECVAKLLSIGNDAEGEELRKRIAAGESFTCPIHICHI 679
           SDK+SGAEVF C +ATCG FYHP+CVAKLL   ++A  EEL+K I AGE F CPIH CH+
Sbjct: 294 SDKSSGAEVFLCANATCGRFYHPQCVAKLLHREDEAAAEELQKNIYAGELFACPIHRCHV 353

Query: 678 CKGRENKEVNELQFAVCRRCPRAYHRKCLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 499
           CK  E+K+  ELQFA+CRRCP++YHRKCLP                              
Sbjct: 354 CKQGEDKKDLELQFAICRRCPKSYHRKCLP-------------------RKISFEDLDEE 394

Query: 498 XXXXXXWEGLLPNNRVLIYCSKHEIDETLATPLRNHIIFP----RLEEKRKCFLDISSNS 331
                 W+GLLP NR+LIYC KHEIDE L TP+R+HI FP    ++E++R        + 
Sbjct: 395 GIIQRAWDGLLP-NRILIYCLKHEIDELLGTPIRDHIKFPNDEEKMEKRRSELFSSRKDL 453

Query: 330 GNVVAKKRLVVTEDFPSERIISATPKHFKKVFSNGNKAGPSRKRERPISRQELLYSSKLK 151
             VV+KKR +V+ED P      +T K  K+       +GP               S +LK
Sbjct: 454 DKVVSKKRSLVSEDSPHG---DSTKKSEKR------SSGPDP-------------SKRLK 491

Query: 150 PEDASRKSLKDS 115
               S+KSL D+
Sbjct: 492 VTGFSKKSLDDN 503


>emb|CBI28789.3| unnamed protein product [Vitis vinifera]
          Length = 1025

 Score =  184 bits (466), Expect = 3e-44
 Identities = 106/261 (40%), Positives = 151/261 (57%), Gaps = 2/261 (0%)
 Frame = -2

Query: 858 SDKTSGAEVFSCVSATCGYFYHPECVAKLLSIGNDAEGEELRKRIAAGESFTCPIHICHI 679
           S+++SGAEVF C SATCG FYHP CVAK L   N+   + L+ +IA G SFTCP+H C +
Sbjct: 100 SNESSGAEVFRCASATCGRFYHPYCVAKRLHPMNNILAKHLQNKIAGGVSFTCPLHKCFV 159

Query: 678 CKGRENKEVNELQFAVCRRCPRAYHRKCLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 499
           CK  ENK V++LQFA+CRRCP+AYHRKCLP                              
Sbjct: 160 CKRGENKGVDDLQFALCRRCPKAYHRKCLP-------------------GNISFECIYNE 200

Query: 498 XXXXXXWEGLLPNNRVLIYCSKHEIDETLATPLRNHIIFPRLEEK-RKCFLDISSNSGNV 322
                 W GLLP NR+LIYC +H+I+  L TP RNHI FP  E K +K   ++ S++  V
Sbjct: 201 NIMQRAWIGLLP-NRILIYCMEHKINRKLRTPERNHIRFPDPESKGKKHVSELPSSNEKV 259

Query: 321 VAKKRLVVTEDFPSE-RIISATPKHFKKVFSNGNKAGPSRKRERPISRQELLYSSKLKPE 145
           ++KKR +V+E FP+E   +  T     +V  +      ++  E+  S Q     +K K  
Sbjct: 260 MSKKRNIVSEIFPAESTAVKMTKLEVHRVVKD---VDSTKFFEKRCSSQGFDPPTKQKIN 316

Query: 144 DASRKSLKDSIQTVSVRVSSA 82
           DA++K L+D++++V V++ ++
Sbjct: 317 DATKKFLRDNVKSVPVKICAS 337


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