BLASTX nr result

ID: Coptis23_contig00008245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008245
         (942 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276201.1| PREDICTED: uncharacterized protein LOC100259...    87   4e-15
ref|XP_002523000.1| conserved hypothetical protein [Ricinus comm...    81   8e-14
ref|XP_002316988.1| predicted protein [Populus trichocarpa] gi|2...    78   3e-12
ref|NP_001241409.1| uncharacterized protein LOC100791765 [Glycin...    78   3e-12
ref|XP_004157185.1| PREDICTED: uncharacterized LOC101210672 [Cuc...    71   4e-11

>ref|XP_002276201.1| PREDICTED: uncharacterized protein LOC100259501 [Vitis vinifera]
           gi|297734203|emb|CBI15450.3| unnamed protein product
           [Vitis vinifera]
          Length = 385

 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 71/189 (37%), Positives = 91/189 (48%), Gaps = 14/189 (7%)
 Frame = -1

Query: 939 SQTAQSTVLNLKGVEVIREHHPSDNNGIALECVWETDKFVLLEKTSNSETKNQVKHVEDG 760
           SQ  QS  L   G+E  RE++P++   + LECVWE DKFVLLE+    E KN      + 
Sbjct: 169 SQKEQSVKLTQAGIEFFREYYPTNEEFVTLECVWEADKFVLLERIKKIEMKNLDGDPRED 228

Query: 759 TGPPLKSSNIQYQTIEAFFGGDELDCPNMDTDSSSEDLSGPT----------NDRIHATD 610
               L +S IQYQ+IEA    DEL     D   SSE+  GPT          N  + + D
Sbjct: 229 VS--LGTSTIQYQSIEALLADDELGSKKTDMLHSSEE--GPTLVSEDKSLLVNPSLESDD 284

Query: 609 AS-TNQLVKVNNEMEVVDSDVENQKGSPDRNFIELGQIASTSSFLSPE-LQTK--SRDTV 442
                  V+V+N  EV  S +EN          E G +  TSSF S   L+ K  S + V
Sbjct: 285 GKRVEDSVQVSNGSEVEGSSIENL-------LPEQGLLPHTSSFPSSNPLKRKFDSSNKV 337

Query: 441 AFVPVGQST 415
           AFV V + T
Sbjct: 338 AFVSVKRPT 346


>ref|XP_002523000.1| conserved hypothetical protein [Ricinus communis]
           gi|223537812|gb|EEF39430.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 394

 Score = 80.9 bits (198), Expect(2) = 8e-14
 Identities = 54/176 (30%), Positives = 87/176 (49%), Gaps = 5/176 (2%)
 Frame = -1

Query: 939 SQTAQSTVLNLKGVEVIREHHPSDNNGIALECVWETDKFVLLEKTSNSETKNQVKHVEDG 760
           SQ  QS  +  +G+EV RE++P++   I L+C+W+TDKF+LLE T   + K Q   + D 
Sbjct: 169 SQKKQSVKITQEGLEVFREYYPTNKEFITLDCIWKTDKFLLLETTHKGDLKAQGGDLGDA 228

Query: 759 TGPPLKSSNIQYQTIEAFFGGDELDCPNMDTDSSSEDLSGPTNDRIHATDASTNQLVKVN 580
           +    + S +QY +I++F G D+ +  NM+ D++++  +    D        T    +  
Sbjct: 229 S---CERSALQYMSIKSFLGDDDSNSKNMNEDNTAKGSTHIKEDEKDLFAGPTESGKRKE 285

Query: 579 NEMEVVDSDVENQKGSPDRNFIELGQIASTSSFL-----SPELQTKSRDTVAFVPV 427
            E  +   D     G+PD   +      +TSS       SP L  +S   VAFV V
Sbjct: 286 EECGIELDDKPVDVGTPDAKLLPESGSPATSSLSPRKHPSPNLSARS---VAFVSV 338



 Score = 22.7 bits (47), Expect(2) = 8e-14
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 374 NEKENSFFSLFTGRN 330
           ++++NSFF L TG N
Sbjct: 374 SKRQNSFFDLLTGGN 388


>ref|XP_002316988.1| predicted protein [Populus trichocarpa] gi|222860053|gb|EEE97600.1|
           predicted protein [Populus trichocarpa]
          Length = 394

 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 56/198 (28%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
 Frame = -1

Query: 939 SQTAQSTVLNLKGVEVIREHHPSDNNGIALECVWETDKFVLLEKTSNSETKNQVKHVEDG 760
           SQ  QS  +  +G+EV RE++P++   + LECVW+TDKFVL+EKT   + K Q   + DG
Sbjct: 169 SQEKQSVKITQEGLEVFREYYPTNKEFVTLECVWKTDKFVLVEKTHKIDVKGQDGGLGDG 228

Query: 759 TGPPLKSSNIQYQTIEAFFGGDELDCPNMDTDSSSEDLSGPTNDRIHATDA--STNQLVK 586
           +   ++ S  +Y TIE+F G  + D    D D ++++ S      +    +  S+    +
Sbjct: 229 S---IEKSVPRYWTIESFLGDSDSDFEKADGDHTAKEDSYEDKQHLFPGPSVESSEHGNQ 285

Query: 585 VNNEMEVVDSDVENQKGS----PDRNFIELGQIASTSSFLSPE----------LQTKSRD 448
           V  ++E+ D+ + ++       P+ +         +S  L+P+          ++  +  
Sbjct: 286 VEGDVELGDNPIISESPGKQLPPEDSLAAKSSSPPSSKVLTPQYGARQVAFVSVKRPAPS 345

Query: 447 TVAFVPVGQ---STSHVE 403
           T AFV V +    TSH+E
Sbjct: 346 TTAFVSVKKPTTPTSHIE 363


>ref|NP_001241409.1| uncharacterized protein LOC100791765 [Glycine max]
           gi|255640181|gb|ACU20381.1| unknown [Glycine max]
          Length = 342

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 55/178 (30%), Positives = 95/178 (53%), Gaps = 3/178 (1%)
 Frame = -1

Query: 939 SQTAQSTVLNLKGVEVIREHHPSDNNGIALECVWETDKFVLLEKTSNSETKNQVKHVED- 763
           S + QS  +   G+EV R+ +P  ++ + LECVW++DKF+LLE+   +   N   HVED 
Sbjct: 169 SISKQSIKITHNGIEVFRDFYPVSDDFVTLECVWKSDKFILLERKHKT---NDESHVEDS 225

Query: 762 GTGPPLKSSNIQYQTIEAFFGGDELDCPNMDTDSSSEDLSGPTNDRIHATDASTNQLVKV 583
           G    +++S++ Y +IE+F G D+L    ++ D  +++      D  H  D +T+ L   
Sbjct: 226 GGNVSVQTSDVNYNSIESFLGDDQLFHERVEADVVAKE------DPNHIDDMNTDLLTGS 279

Query: 582 N--NEMEVVDSDVENQKGSPDRNFIELGQIASTSSFLSPELQTKSRDTVAFVPVGQST 415
           +  ++ E   SD +  K   + +  E G  AS+ S  + +LQ+  +  VAFV +   T
Sbjct: 280 SQIDDKETRYSDQDTTKAFINESSQEAGLPASSRSSTNDKLQSCPK-KVAFVSIKNLT 336


>ref|XP_004157185.1| PREDICTED: uncharacterized LOC101210672 [Cucumis sativus]
          Length = 394

 Score = 71.2 bits (173), Expect(2) = 4e-11
 Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 9/180 (5%)
 Frame = -1

Query: 939 SQTAQSTVLNLKGVEVIREHHPSDNNGIALECVWETDKFVLLEKTSNSETKNQVKHVEDG 760
           S+  Q   +N + ++V RE +P+++  + LEC+WE DKF+L EK +   TKNQ +H+   
Sbjct: 174 SKKKQVVAINQERIQVFREFYPTNDEYVLLECIWEVDKFILKEKKNEIATKNQEEHIAPD 233

Query: 759 TGPPLKSSNIQYQTIEAFFGGDEL------DCPNMDTDSSSE---DLSGPTNDRIHATDA 607
               L +S ++YQ + +F G DE       +    D + S+E   DL   T + + A+ +
Sbjct: 234 FS--LATSAMRYQKLRSFLGDDESEEAEDDESEEADANQSNEKGLDLMKTTPNGLLASPS 291

Query: 606 STNQLVKVNNEMEVVDSDVENQKGSPDRNFIELGQIASTSSFLSPELQTKSRDTVAFVPV 427
            +   + + +  E  D  +   K +      + G     SS   P  +  +    AFV V
Sbjct: 292 GSVNDISMEDNTETKDGLISPVKTTSKTFLPQEGNSLVNSSPPMPSAKKPNSKRPAFVSV 351



 Score = 23.1 bits (48), Expect(2) = 4e-11
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -2

Query: 371 EKENSFFSLFTG 336
           EKEN FF+L TG
Sbjct: 375 EKENPFFTLLTG 386


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