BLASTX nr result

ID: Coptis23_contig00008244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008244
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145441.1| PREDICTED: proteasome subunit alpha type-2-B...    84   1e-14
gb|ABA81880.1| unknown [Solanum tuberosum]                             83   2e-14
ref|XP_002278126.1| PREDICTED: proteasome subunit alpha type-2-B...    83   3e-14
ref|XP_003516906.1| PREDICTED: proteasome subunit alpha type-2-A...    82   6e-14
gb|ACU23424.1| unknown [Glycine max]                                   82   6e-14

>ref|XP_004145441.1| PREDICTED: proteasome subunit alpha type-2-B-like [Cucumis sativus]
           gi|449487656|ref|XP_004157735.1| PREDICTED: proteasome
           subunit alpha type-2-B-like [Cucumis sativus]
          Length = 235

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 42/44 (95%), Positives = 42/44 (95%)
 Frame = -3

Query: 308 ILTLKEGFEGQISSKNIEIGIIGNDKTFRVLTPAEIDDYLAEVE 177
           ILTLKEGFEGQISSKNIEIGIIG DK FRVLTPAEIDDYLAEVE
Sbjct: 192 ILTLKEGFEGQISSKNIEIGIIGTDKKFRVLTPAEIDDYLAEVE 235


>gb|ABA81880.1| unknown [Solanum tuberosum]
          Length = 235

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 41/44 (93%), Positives = 41/44 (93%)
 Frame = -3

Query: 308 ILTLKEGFEGQISSKNIEIGIIGNDKTFRVLTPAEIDDYLAEVE 177
           ILTLKEGFEGQIS KNIEIGIIGNDK FRVLTPAEIDDYL EVE
Sbjct: 192 ILTLKEGFEGQISGKNIEIGIIGNDKVFRVLTPAEIDDYLQEVE 235


>ref|XP_002278126.1| PREDICTED: proteasome subunit alpha type-2-B [Vitis vinifera]
           gi|297737956|emb|CBI27157.3| unnamed protein product
           [Vitis vinifera]
          Length = 235

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 41/44 (93%), Positives = 42/44 (95%)
 Frame = -3

Query: 308 ILTLKEGFEGQISSKNIEIGIIGNDKTFRVLTPAEIDDYLAEVE 177
           ILTLKEGFEGQISSKNIEIGIIG D+ FRVLTPAEIDDYLAEVE
Sbjct: 192 ILTLKEGFEGQISSKNIEIGIIGTDRKFRVLTPAEIDDYLAEVE 235


>ref|XP_003516906.1| PREDICTED: proteasome subunit alpha type-2-A-like [Glycine max]
          Length = 235

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/44 (93%), Positives = 41/44 (93%)
 Frame = -3

Query: 308 ILTLKEGFEGQISSKNIEIGIIGNDKTFRVLTPAEIDDYLAEVE 177
           ILTLKEGFEGQIS KNIEIGIIG DK FRVLTPAEIDDYLAEVE
Sbjct: 192 ILTLKEGFEGQISGKNIEIGIIGADKKFRVLTPAEIDDYLAEVE 235


>gb|ACU23424.1| unknown [Glycine max]
          Length = 235

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/44 (93%), Positives = 41/44 (93%)
 Frame = -3

Query: 308 ILTLKEGFEGQISSKNIEIGIIGNDKTFRVLTPAEIDDYLAEVE 177
           ILTLKEGFEGQIS KNIEIGIIG DK FRVLTPAEIDDYLAEVE
Sbjct: 192 ILTLKEGFEGQISGKNIEIGIIGADKKFRVLTPAEIDDYLAEVE 235


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