BLASTX nr result

ID: Coptis23_contig00008240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008240
         (1188 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264646.1| PREDICTED: uncharacterized protein LOC100262...   250   8e-87
ref|NP_190855.1| IQ calmodulin-binding motif family protein [Ara...   234   4e-86
gb|AAM78112.1| AT3g52870/F8J2_40 [Arabidopsis thaliana]               229   2e-84
ref|XP_004144116.1| PREDICTED: uncharacterized protein LOC101207...   204   4e-66
ref|XP_002514129.1| calmodulin binding protein, putative [Ricinu...   207   2e-64

>ref|XP_002264646.1| PREDICTED: uncharacterized protein LOC100262617 [Vitis vinifera]
           gi|296090430|emb|CBI40249.3| unnamed protein product
           [Vitis vinifera]
          Length = 447

 Score =  250 bits (638), Expect(2) = 8e-87
 Identities = 117/182 (64%), Positives = 142/182 (78%)
 Frame = +1

Query: 1   IDPRHRYGHSLHFYYDEWRQVDSGQPFFYWLDIGDGREVDLWVCPRSKLRQQCIKYLGPQ 180
           IDPRHRYGH+L+ YY+EW + D+GQPFFYWLD+GDG+EV+L  CPRS+LR++CI+YLGPQ
Sbjct: 119 IDPRHRYGHNLNLYYEEWCKGDAGQPFFYWLDVGDGKEVELKQCPRSRLRRECIRYLGPQ 178

Query: 181 EREHYEYIVVEGKIAHKQTGELLDTFKGEEEGVKWIYVMSTSKKLYMGEKMKGLFHHSSF 360
           EREHYEYI+VEG I HK +G+LLDT  G+ EG KWI+VMSTSK+LY G+K KGLFHHSSF
Sbjct: 179 EREHYEYIIVEGTIVHKLSGDLLDT-NGDLEGSKWIFVMSTSKRLYAGQKRKGLFHHSSF 237

Query: 361 XXXXXXXXXXXXVCEDGVLKSISAYSGHYRPTSENLGSFLAVLKEYGVNLERVHVCNSFE 540
                       + E G L+S+SAYSGHYRPT  NL SFL  LKE+GVNL+ V V +  E
Sbjct: 238 LAGGATLAAGRLMAEGGKLRSVSAYSGHYRPTDGNLSSFLVFLKEHGVNLDGVQVLSPTE 297

Query: 541 YL 546
            L
Sbjct: 298 DL 299



 Score = 98.2 bits (243), Expect(2) = 8e-87
 Identities = 53/87 (60%), Positives = 67/87 (77%), Gaps = 4/87 (4%)
 Frame = +3

Query: 645 PSK--KKTEMESSQRTLS--LRSPRANVPEHEILQRINTKKAASSYQLGHQLSLKWSTGA 812
           PSK  +   + S +R+LS  L+SPR  VP+ +ILQR+ +KK   SYQLG QLSLKWSTGA
Sbjct: 338 PSKFAQIVRISSYKRSLSGNLQSPRMRVPKKDILQRMKSKKE-DSYQLGDQLSLKWSTGA 396

Query: 813 GPRIGCVADYPTELRIQALEFVNLSPR 893
           GPRIGCVADYP +LR+QA E V+L+P+
Sbjct: 397 GPRIGCVADYPLKLRVQAFEMVDLTPK 423


>ref|NP_190855.1| IQ calmodulin-binding motif family protein [Arabidopsis thaliana]
           gi|7529711|emb|CAB86891.1| putative protein [Arabidopsis
           thaliana] gi|24111367|gb|AAN46807.1| At3g52870/F8J2_40
           [Arabidopsis thaliana] gi|332645481|gb|AEE79002.1| IQ
           calmodulin-binding motif family protein [Arabidopsis
           thaliana]
          Length = 456

 Score =  234 bits (598), Expect(3) = 4e-86
 Identities = 109/180 (60%), Positives = 134/180 (74%)
 Frame = +1

Query: 1   IDPRHRYGHSLHFYYDEWRQVDSGQPFFYWLDIGDGREVDLWVCPRSKLRQQCIKYLGPQ 180
           IDPRHRYGH+LH YY+EW + D+GQPFFYWLD+G G ++DL  CPRSKL+QQCI+YLGPQ
Sbjct: 138 IDPRHRYGHNLHKYYEEWCKADAGQPFFYWLDVGGGIDLDLNECPRSKLKQQCIRYLGPQ 197

Query: 181 EREHYEYIVVEGKIAHKQTGELLDTFKGEEEGVKWIYVMSTSKKLYMGEKMKGLFHHSSF 360
           ERE YEY+++EGKI HK TG+ L T  G  EG KWI+VMST KKLY G K KG FHHSSF
Sbjct: 198 EREEYEYVIIEGKIVHKLTGKFLHTMHG-SEGTKWIFVMSTFKKLYAGLKKKGRFHHSSF 256

Query: 361 XXXXXXXXXXXXVCEDGVLKSISAYSGHYRPTSENLGSFLAVLKEYGVNLERVHVCNSFE 540
                       + ++GVLK+ISAYSGHYRP+ ++L +FL  L+E  VNL+ V V  + E
Sbjct: 257 LAGGATLAAGRVIVDNGVLKTISAYSGHYRPSDDSLDTFLGFLRENAVNLDNVEVHKASE 316



 Score =  110 bits (275), Expect(3) = 4e-86
 Identities = 55/82 (67%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
 Frame = +3

Query: 654 KKTEMESSQRTLS--LRSPRANVPEHEILQRINTKKAASSYQLGHQLSLKWSTGAGPRIG 827
           ++ +  S QRTLS  L SP+ANVP+  +L RIN+KK + S QLGHQLSLKWSTG GPRIG
Sbjct: 361 EEAKRSSYQRTLSGGLGSPKANVPQKSMLLRINSKKQSRSLQLGHQLSLKWSTGVGPRIG 420

Query: 828 CVADYPTELRIQALEFVNLSPR 893
           C ADYP +LR QALEFVNLSP+
Sbjct: 421 CAADYPVQLRTQALEFVNLSPK 442



 Score = 22.3 bits (46), Expect(3) = 4e-86
 Identities = 9/16 (56%), Positives = 13/16 (81%), Gaps = 1/16 (6%)
 Frame = +2

Query: 599 EIH-TSEDSDNYEDSI 643
           E+H  SEDSD+Y+D +
Sbjct: 310 EVHKASEDSDSYDDYV 325


>gb|AAM78112.1| AT3g52870/F8J2_40 [Arabidopsis thaliana]
          Length = 456

 Score =  229 bits (584), Expect(3) = 2e-84
 Identities = 106/180 (58%), Positives = 131/180 (72%)
 Frame = +1

Query: 1   IDPRHRYGHSLHFYYDEWRQVDSGQPFFYWLDIGDGREVDLWVCPRSKLRQQCIKYLGPQ 180
           IDPRHRYGH+LH YY+EW + D+GQPFFYWLD+G G ++DL  CPRSKL+QQCI+YLGPQ
Sbjct: 138 IDPRHRYGHNLHKYYEEWCKADAGQPFFYWLDVGGGIDLDLNECPRSKLKQQCIRYLGPQ 197

Query: 181 EREHYEYIVVEGKIAHKQTGELLDTFKGEEEGVKWIYVMSTSKKLYMGEKMKGLFHHSSF 360
           ERE YEY+++EGKI HK TG+ L T  G  EG KWI+VMST KKLY G K KG FHHSSF
Sbjct: 198 EREEYEYVIIEGKIVHKLTGKFLHTMHG-SEGTKWIFVMSTFKKLYAGLKKKGRFHHSSF 256

Query: 361 XXXXXXXXXXXXVCEDGVLKSISAYSGHYRPTSENLGSFLAVLKEYGVNLERVHVCNSFE 540
                       + ++GVLK+I AYSGHYRP+ ++L +F    +E  VNL+ V V  + E
Sbjct: 257 LAGGATLAAGRVIVDNGVLKTIFAYSGHYRPSDDSLDTFFGFFRENAVNLDNVEVHKASE 316



 Score =  110 bits (275), Expect(3) = 2e-84
 Identities = 55/82 (67%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
 Frame = +3

Query: 654 KKTEMESSQRTLS--LRSPRANVPEHEILQRINTKKAASSYQLGHQLSLKWSTGAGPRIG 827
           ++ +  S QRTLS  L SP+ANVP+  +L RIN+KK + S QLGHQLSLKWSTG GPRIG
Sbjct: 361 EEAKRSSYQRTLSGGLGSPKANVPQKSMLLRINSKKQSRSLQLGHQLSLKWSTGVGPRIG 420

Query: 828 CVADYPTELRIQALEFVNLSPR 893
           C ADYP +LR QALEFVNLSP+
Sbjct: 421 CAADYPVQLRTQALEFVNLSPK 442



 Score = 22.3 bits (46), Expect(3) = 2e-84
 Identities = 9/16 (56%), Positives = 13/16 (81%), Gaps = 1/16 (6%)
 Frame = +2

Query: 599 EIH-TSEDSDNYEDSI 643
           E+H  SEDSD+Y+D +
Sbjct: 310 EVHKASEDSDSYDDYV 325


>ref|XP_004144116.1| PREDICTED: uncharacterized protein LOC101207749 [Cucumis sativus]
           gi|449489955|ref|XP_004158468.1| PREDICTED:
           uncharacterized LOC101207749 [Cucumis sativus]
          Length = 535

 Score =  204 bits (519), Expect(2) = 4e-66
 Identities = 93/176 (52%), Positives = 123/176 (69%)
 Frame = +1

Query: 1   IDPRHRYGHSLHFYYDEWRQVDSGQPFFYWLDIGDGREVDLWVCPRSKLRQQCIKYLGPQ 180
           IDPRHRYGH+LH YYD W   +S QPFFYWLDIGDG+E+ +  CPR+ L++QCIKYLGP+
Sbjct: 214 IDPRHRYGHNLHLYYDVWFVSESNQPFFYWLDIGDGKEITVEKCPRATLKKQCIKYLGPK 273

Query: 181 EREHYEYIVVEGKIAHKQTGELLDTFKGEEEGVKWIYVMSTSKKLYMGEKMKGLFHHSSF 360
           ERE YE IV  GK+ +K+ G++++T    +EG KWI+V+ST++ LY+G+K KG F HSSF
Sbjct: 274 EREEYEVIVKNGKLVYKKNGDIVET----KEGSKWIFVLSTTRSLYVGQKKKGQFQHSSF 329

Query: 361 XXXXXXXXXXXXVCEDGVLKSISAYSGHYRPTSENLGSFLAVLKEYGVNLERVHVC 528
                       V  DG++++I  YSGHY PT  N   FL+ LKE  V+L  V +C
Sbjct: 330 LSGAAITAAGRLVAHDGLIQAIWPYSGHYHPTEANFNEFLSFLKENHVDLTNVKMC 385



 Score = 75.1 bits (183), Expect(2) = 4e-66
 Identities = 45/115 (39%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
 Frame = +3

Query: 645 PSKKKTEMESSQRTLSLRSPRANVP---EHEILQ-----RINTKKAASSYQLGHQLSLKW 800
           P+ ++T  +S+        P++ VP   E +        R + K  A  + +  +LS KW
Sbjct: 402 PNSRETSFKSTPPLEEEEEPKSTVPIASEEKSTTVTDDVRRSEKATAKQFDMSKRLSCKW 461

Query: 801 STGAGPRIGCVADYPTELRIQALEFVNLSPRXXXXXXSFRVLAGFPPTSSPASDP 965
           STGAGPRIGCV DYPTEL+  ALE VNLSPR          L  + P  SP   P
Sbjct: 462 STGAGPRIGCVRDYPTELQTMALEHVNLSPRVGSGP-----LVNYGPIPSPRPSP 511


>ref|XP_002514129.1| calmodulin binding protein, putative [Ricinus communis]
           gi|223546585|gb|EEF48083.1| calmodulin binding protein,
           putative [Ricinus communis]
          Length = 541

 Score =  207 bits (527), Expect(2) = 2e-64
 Identities = 98/184 (53%), Positives = 127/184 (69%)
 Frame = +1

Query: 1   IDPRHRYGHSLHFYYDEWRQVDSGQPFFYWLDIGDGREVDLWVCPRSKLRQQCIKYLGPQ 180
           IDPRHRYGH+LHFYYD W + +S QPFFYWLD+GDG+EV+L  C R+ L++QCIKYLGP+
Sbjct: 217 IDPRHRYGHNLHFYYDVWFRSESTQPFFYWLDVGDGKEVNLEKCQRTTLQRQCIKYLGPK 276

Query: 181 EREHYEYIVVEGKIAHKQTGELLDTFKGEEEGVKWIYVMSTSKKLYMGEKMKGLFHHSSF 360
           ERE YE IV  GK+ ++Q+G L+DT     EG KWI+V+ST++ LY+G+K KG+F HSSF
Sbjct: 277 EREAYEVIVENGKLVYRQSGNLVDTV----EGSKWIFVLSTTRALYVGQKKKGMFQHSSF 332

Query: 361 XXXXXXXXXXXXVCEDGVLKSISAYSGHYRPTSENLGSFLAVLKEYGVNLERVHVCNSFE 540
                       V   G+L++I  YSGHY PT EN   FL+ L+E  V+L  V  C   +
Sbjct: 333 LSGGATTAAGRLVAHGGILEAIWPYSGHYHPTEENFREFLSFLRENNVDLTNVKKCAIDD 392

Query: 541 YLPF 552
             PF
Sbjct: 393 DSPF 396



 Score = 66.2 bits (160), Expect(2) = 2e-64
 Identities = 40/102 (39%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
 Frame = +3

Query: 672 SSQRTLSLRSPRANVPEHEILQRINTKKAASSYQL----GHQLSLKWSTGAGPRIGCVAD 839
           +S   LS +     V + E  Q I T   ++   +       L+  W+TGAGPRIGCV D
Sbjct: 422 NSHTDLSTKETTITVNKEEQQQAIKTNNGSAKATIFEWRPEHLTCNWTTGAGPRIGCVRD 481

Query: 840 YPTELRIQALEFVNLSPRXXXXXXSFRVLAGFPPTSSPASDP 965
           YPTEL+ +ALE VNLSPR          L+ + P  SP   P
Sbjct: 482 YPTELQSRALEQVNLSPRVPPGS-----LSNYGPIPSPRPSP 518


Top