BLASTX nr result

ID: Coptis23_contig00008237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008237
         (880 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25419.3| unnamed protein product [Vitis vinifera]              172   1e-40
gb|ADJ67432.1| ethylene response factor 3 [Actinidia deliciosa]       166   5e-39
ref|XP_002520794.1| Dehydration-responsive element-binding prote...   164   3e-38
emb|CAN75315.1| hypothetical protein VITISV_024158 [Vitis vinifera]   164   3e-38
gb|ADE35085.1| DREB2A [Salicornia brachiata]                          160   4e-37

>emb|CBI25419.3| unnamed protein product [Vitis vinifera]
          Length = 1635

 Score =  172 bits (435), Expect = 1e-40
 Identities = 115/264 (43%), Positives = 152/264 (57%), Gaps = 5/264 (1%)
 Frame = -1

Query: 802 RKKRPRTSC--NVAETLLKWKEINSSDNGSTGILKQTAKGSKKGCMRGKGGPENSHCNFR 629
           RK R R S   +VAETL +WK+ N   +    + K  AKGSKKGCM+GKGGPENS C +R
Sbjct: 10  RKSRSRRSGPNSVAETLARWKQYNDILDS---VRKAPAKGSKKGCMKGKGGPENSICGYR 66

Query: 628 GVRQRTWGKWVAEIREPNRGKRLWLGTFNTSVEXXXXXXXXXXAMYGINARLNLPEYSDS 449
           GVRQRTWGKWVAEIREPNRG RLWLGTF T++E          AMYG +ARLNLP Y+ S
Sbjct: 67  GVRQRTWGKWVAEIREPNRGSRLWLGTFPTAIEAALAYDEAARAMYGSSARLNLPNYTTS 126

Query: 448 ELKDLSWSSDNESKGHIVKVEPDFGKVRSANFRPAIDNDVLATDFVKKEFN---QDVKNM 278
            LKD S S+   S         ++ +V +       D+       +K E N    D    
Sbjct: 127 -LKDSS-SAPTTSVSDSTTTTSNYSEVCAYE-----DSKKPVLPSIKHEKNGHSLDAMYF 179

Query: 277 SSDDLIGSGCDQLNYQDFSVSDMIDLEKLMDEIGYGSPQDELGTMTMTQDLKNYDTGQLG 98
            ++D    G D L  + F + +M D+++ +  I      D L +    Q+L  +D+GQ+G
Sbjct: 180 KNED---GGQDFL--EGFPMDEMFDVDEFLRAI----DSDPLASYGTRQEL-GHDSGQVG 229

Query: 97  FSYTDQLQYGLQPSELSYQLQNPD 26
              TD +Q+  +P++LSYQLQNPD
Sbjct: 230 SFETDNMQWE-KPTDLSYQLQNPD 252


>gb|ADJ67432.1| ethylene response factor 3 [Actinidia deliciosa]
          Length = 341

 Score =  166 bits (421), Expect = 5e-39
 Identities = 116/290 (40%), Positives = 153/290 (52%), Gaps = 26/290 (8%)
 Frame = -1

Query: 817 DCSSFRKKRPRTSC--NVAETLLKWKEIN----SSDNGSTGILKQTAKGSKKGCMRGKGG 656
           D S  RK R R      + ETL KWKE N    S DN    + +  AKGSKKGCM+GKGG
Sbjct: 26  DYSRKRKARNRRDGPNGIVETLAKWKEYNEKLESLDNSPKPVRRAPAKGSKKGCMKGKGG 85

Query: 655 PENSHCNFRGVRQRTWGKWVAEIREPNRGKRLWLGTFNTSVEXXXXXXXXXXAMYGINAR 476
           P+NS+CN+RGVRQRTWGKWVAEIREPNRG RLWLGTF T++E          AMYG +AR
Sbjct: 86  PQNSNCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTALEAARAYDEAAKAMYGPSAR 145

Query: 475 LNL---PEYSDSELKDLSW-----------SSDNESKGHIVKVEPDFG--KVRSANFRPA 344
           LN      +++S ++  S            SS +E K H  K + + G  + R     P 
Sbjct: 146 LNFANGSSFTESSVESASLPTTSGSGSSTSSSYSEVKLHAPKAKHEDGDDESRIGGNSPL 205

Query: 343 IDNDVLATDFVKKEFNQDVKNMSSD----DLIGSGCDQLNYQDFSVSDMIDLEKLMDEIG 176
             N++  T  VK+E N +    +      +LIG        +DFS+ +  D+E+L+  + 
Sbjct: 206 ASNNMPMT-AVKEEVNDEPVEFNGKGEQMELIGKPSLDYILEDFSLDETFDVEELLGIL- 263

Query: 175 YGSPQDELGTMTMTQDLKNYDTGQLGFSYTDQLQYGLQPSELSYQLQNPD 26
                DE+G    + D  N+               G +PS+LSYQLQNPD
Sbjct: 264 -----DEMG---QSSDRINFQ--------------GEKPSDLSYQLQNPD 291


>ref|XP_002520794.1| Dehydration-responsive element-binding protein 2C, putative
           [Ricinus communis] gi|223539925|gb|EEF41503.1|
           Dehydration-responsive element-binding protein 2C,
           putative [Ricinus communis]
          Length = 386

 Score =  164 bits (414), Expect = 3e-38
 Identities = 125/332 (37%), Positives = 164/332 (49%), Gaps = 68/332 (20%)
 Frame = -1

Query: 817 DCSSFRKKRPRTSCNVAETLLKWKEINSS-DNGSTG-----ILKQTAKGSKKGCMRGKGG 656
           D +  RK+R  TS +VAETL KWKE N   D+ + G     + K  AKGS+KGCM+GKGG
Sbjct: 16  DSTRKRKRREGTS-SVAETLKKWKEYNEYLDSCAKGEDNKPVRKTPAKGSRKGCMKGKGG 74

Query: 655 PENSHCNFRGVRQRTWGKWVAEIREPNRGKRLWLGTFNTSVEXXXXXXXXXXAMYGINAR 476
           PENS CN+RGVRQRTWGKWVAEIREPNRG RLWLGTF T+ E          AMYG +AR
Sbjct: 75  PENSECNYRGVRQRTWGKWVAEIREPNRGPRLWLGTFPTAYEAAVAYDEAAKAMYGSSAR 134

Query: 475 LNLPEYSDSELKDL--------------------SWSSDNES--------KGHIVKVEPD 380
           LN PE S S   D                     S ++ N S        K H+VK+   
Sbjct: 135 LNFPELSSSSKDDTHSVATTSGGYPSVAAPAGSDSTTTSNHSEVCVLDDTKEHVVKLGDG 194

Query: 379 FGKVRSANFRPAIDNDVLATDFVKKEFNQDVKNMSSD-----------------DLIGSG 251
            G+ +       +     AT   K+E   +++N+                    DL   G
Sbjct: 195 EGESKITPHSDPLTQTASATTTYKQELKSELENVKESDRGEVPVKEVPIQNNACDLKQKG 254

Query: 250 CDQLN--YQDFSVSDMIDLEKLMDEIGYGSPQDELGTMTMTQ---------DLKNY---- 116
            D L    +DFS++  ++   L++E   G  QD     TM +          + NY    
Sbjct: 255 ADDLQPVPKDFSLN--VEEWNLLNE-NEGQGQDIWQNFTMDELFNVDELLGVIDNYPLDM 311

Query: 115 --DTGQLGFSYTDQLQYGLQPSELSYQLQNPD 26
             D GQL  +  +QLQ+  QP +LS+QL++PD
Sbjct: 312 QFDGGQLLCTDNNQLQHD-QPLDLSFQLESPD 342


>emb|CAN75315.1| hypothetical protein VITISV_024158 [Vitis vinifera]
          Length = 1904

 Score =  164 bits (414), Expect = 3e-38
 Identities = 112/292 (38%), Positives = 153/292 (52%), Gaps = 33/292 (11%)
 Frame = -1

Query: 802 RKKRPRTSC--NVAETLLKWKEINSSDNGSTGILKQTAKGSKKGCMRGKGGPENSHCNFR 629
           RK R R S   +VAETL +WK+ N   +    + K  AKGSKKGCM+GKGGPENS C +R
Sbjct: 21  RKSRSRRSGPNSVAETLARWKQYNDILDS---VRKAPAKGSKKGCMKGKGGPENSICGYR 77

Query: 628 GVRQRTWGKWVAEIREPNRGKRLWLGTFNTSVEXXXXXXXXXXAMYGINARLNLPEYSDS 449
           GVRQRTWGKWVAEIREPNRG RLWLGTF T++E          AMYG +ARLNLP Y+ S
Sbjct: 78  GVRQRTWGKWVAEIREPNRGSRLWLGTFPTAIEAALAYDEAARAMYGSSARLNLPNYTTS 137

Query: 448 ELKDLSWSSD------NESK-----------------------GHIVKVEP--DFGKVRS 362
            LK   + S+       +SK                         +VK EP      V  
Sbjct: 138 -LKGFFFGSNYIVCAYEDSKKPVLPSIKHESGEGESGISGGMLSAVVKAEPATPVSLVTQ 196

Query: 361 ANFRPAIDNDVLATDFVKKEFNQDVKNMSSDDLIGSGCDQLNYQDFSVSDMIDLEKLMDE 182
                 ++      D +K +  ++  ++ +         Q   + F + +M D+++ +  
Sbjct: 197 GGGNDPVNVGNEPVDAMKLQHEENGHSLDAMYFKNEDGGQDFLEGFPMDEMFDVDEFLRA 256

Query: 181 IGYGSPQDELGTMTMTQDLKNYDTGQLGFSYTDQLQYGLQPSELSYQLQNPD 26
           I      D L +    Q+L  +D+GQ+G   TD +Q+  +P++LSYQLQNPD
Sbjct: 257 I----DSDPLASYGTRQEL-GHDSGQVGSFETDNMQWE-KPTDLSYQLQNPD 302


>gb|ADE35085.1| DREB2A [Salicornia brachiata]
          Length = 353

 Score =  160 bits (405), Expect = 4e-37
 Identities = 114/301 (37%), Positives = 152/301 (50%), Gaps = 40/301 (13%)
 Frame = -1

Query: 802 RKKRPRTSCNVAETLLKWKEINS---SDNGSTGILKQTAKGSKKGCMRGKGGPENSHCNF 632
           R++R  T  +V ETL KWKEINS    +N    I K  AKGSKKGCM+GKGGPENS C F
Sbjct: 29  RRRRNETE-SVEETLAKWKEINSITIPNNEGEPIRKAPAKGSKKGCMKGKGGPENSLCKF 87

Query: 631 RGVRQRTWGKWVAEIREPNRGKRLWLGTFNTSVEXXXXXXXXXXAMYGINARLNLPEYSD 452
           RGVRQRTWGKWVAEIREPNRG+RLWLGTF T+VE           MYG +ARLNLP Y  
Sbjct: 88  RGVRQRTWGKWVAEIREPNRGRRLWLGTFPTAVEAALAYDEAARTMYGPSARLNLPNYKS 147

Query: 451 SELKDL------------------SWSSDNESK------------GHIVKVEPDFGKVRS 362
           S  +D                   + SSDN S+            G  +K E   G+ ++
Sbjct: 148 SLFEDYRATSAARPAITASYTTGSTTSSDNHSEVCVKDEPDRKMGGSALKWEEGEGESKA 207

Query: 361 ANFRPAIDNDVLATDFVKKEFNQDVKNMSSDDLIGSGCDQLNY-QDFSVSDMIDLEKLMD 185
               P++D +     +  KE     + M+       G D  +Y Q+ ++ +M D+++L+ 
Sbjct: 208 NVSTPSMDFNAGPPPYPIKE-----EAMAEASRGDDGIDINDYLQNLTMEEMFDVDELLG 262

Query: 184 EIGYG--SPQDELGTMTMTQDLKNY----DTGQLGFSYTDQLQYGLQPSELSYQLQNPDE 23
            I  G  SP D     TM Q  +++    +  Q+     + L      S   Y +Q+   
Sbjct: 263 AINAGPVSPAD----YTMNQGYEDFRSLVEGNQIQLERPEDLPQQNLNSNFLYPIQDQSH 318

Query: 22  N 20
           N
Sbjct: 319 N 319


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