BLASTX nr result

ID: Coptis23_contig00008226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008226
         (948 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520331.1| conserved hypothetical protein [Ricinus comm...   122   2e-25
ref|XP_002307455.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-22
ref|XP_004142634.1| PREDICTED: uncharacterized protein LOC101220...   108   2e-21
ref|NP_177864.1| uncharacterized protein [Arabidopsis thaliana] ...    96   1e-17
gb|AAW80930.1| unknown, partial [Astragalus membranaceus]              89   1e-15

>ref|XP_002520331.1| conserved hypothetical protein [Ricinus communis]
           gi|223540550|gb|EEF42117.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 196

 Score =  122 bits (305), Expect = 2e-25
 Identities = 84/200 (42%), Positives = 108/200 (54%), Gaps = 40/200 (20%)
 Frame = +1

Query: 79  MGIDESFKRSGSIPFKWEVQPGIPK----------ACPNGTSHAPP-------------- 186
           M ID+SFK+ G++PFKWE++PG+PK          + P   S +PP              
Sbjct: 1   MTIDDSFKKPGAVPFKWEIRPGVPKIQHHQQPKQLSPPKLPSPSPPFNLRRPSVSPLPTP 60

Query: 187 ---LKLRPPPSEFYY----SDSTH--RSITPTRSGRRLFHRFNSQRLTTSSVVSSGCFPS 339
              LKL+PPP+ F +       TH  RS   TRS R    RF+         VS GCFPS
Sbjct: 61  QPQLKLKPPPAGFIFLPPPEPRTHSFRSAPRTRSER---WRFDQPTRVGPECVSPGCFPS 117

Query: 340 PSVKVKHKVGKK-----NINKAGSELELGYVSDLETLARWSVSTEKSLSPSDES--PSFL 498
            S  +K K  K+     +I+  GSE E  YVSDLETLARWS+S+ KS SP ++S   S+ 
Sbjct: 118 -SPLLKRKGSKRRTSHVHIDIPGSESEGDYVSDLETLARWSLSSRKSFSPFNDSSVSSYS 176

Query: 499 SERSPPPPAMDSEWAAFGLF 558
           S +S P P  D+EWA FGLF
Sbjct: 177 SSQSSPRPVSDAEWAGFGLF 196


>ref|XP_002307455.1| predicted protein [Populus trichocarpa] gi|222856904|gb|EEE94451.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score =  112 bits (279), Expect = 2e-22
 Identities = 71/192 (36%), Positives = 97/192 (50%), Gaps = 34/192 (17%)
 Frame = +1

Query: 85  IDESFKRSGSIPFKWEVQPGIPK------------ACPNGTSHAPPL------------- 189
           ID+SFK+ G++PFKWE++PG+PK            + P   S +PP              
Sbjct: 5   IDDSFKKPGAVPFKWEIRPGVPKIQRQQKQQKKELSPPTLPSPSPPFNHRRPSPTPQVQK 64

Query: 190 -KLRPPPSEFYYSDS------THRSITPTRSGRRLFHRFNSQRLTTSSVVSSGCFPSPSV 348
            KL+PPP+   +         + RS   +RSGR    RF          VS GCFPSP +
Sbjct: 65  QKLKPPPARSVFLPPPEPRAHSFRSAPRSRSGR---WRFEQPTHVRPECVSPGCFPSPLL 121

Query: 349 KVKHKVGKKNINKAGSELELGYVSDLETLARWSVSTEKSLSPSDESP--SFLSERSPPPP 522
           + K    + +   A    E  Y SDL+TL+RWS+S+ KS S   +SP  SF S +S P P
Sbjct: 122 RRKDSKRRTSAGIAKPASEPDYTSDLDTLSRWSISSRKSFSSFRDSPASSFSSYQSSPRP 181

Query: 523 AMDSEWAAFGLF 558
             D++WA FGLF
Sbjct: 182 VSDAQWAGFGLF 193


>ref|XP_004142634.1| PREDICTED: uncharacterized protein LOC101220757 [Cucumis sativus]
           gi|449500656|ref|XP_004161160.1| PREDICTED:
           uncharacterized LOC101220757 [Cucumis sativus]
          Length = 162

 Score =  108 bits (270), Expect = 2e-21
 Identities = 68/174 (39%), Positives = 100/174 (57%), Gaps = 14/174 (8%)
 Frame = +1

Query: 79  MGIDESFKRSGSIPFKWEVQPGIPK---ACPNGTSHAPP----LKLRPPP--SEFYYSDS 231
           M  DE +++  ++PFKWE++PG+P+      +  +H+PP     KL+PPP  S F +  +
Sbjct: 1   MDTDEFYRQPAAVPFKWEIKPGVPRNHHRLRHSPTHSPPQHHRQKLKPPPAVSHFPHPPN 60

Query: 232 THRSITPTRSGRRLFHRFNSQRLTTSSVVSSGCFPSPSVKVKHKVGKKNINKAGSELELG 411
           +  S   T+S R  F R       +  V SSGCFPSP   + ++   K++++   E +  
Sbjct: 61  SLHSSPRTQSERWRFVR-------SEQVSSSGCFPSP---LPNRKSPKSVSRKLPEPD-- 108

Query: 412 YVSDLETLARWSVSTEKSLSP-----SDESPSFLSERSPPPPAMDSEWAAFGLF 558
           Y SDL+TL+RWSVS+ KS+SP     S    SF S +S P P  D+EWA FGLF
Sbjct: 109 YSSDLDTLSRWSVSSRKSISPFRYSVSSSPSSFSSYQSSPRPTSDTEWAGFGLF 162


>ref|NP_177864.1| uncharacterized protein [Arabidopsis thaliana]
           gi|11079486|gb|AAG29198.1|AC078898_8 hypothetical
           protein [Arabidopsis thaliana]
           gi|28466875|gb|AAO44046.1| At1g77400 [Arabidopsis
           thaliana] gi|51971947|dbj|BAD44638.1| At1g77400
           [Arabidopsis thaliana] gi|110736099|dbj|BAF00022.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332197852|gb|AEE35973.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 232

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 75/227 (33%), Positives = 100/227 (44%), Gaps = 69/227 (30%)
 Frame = +1

Query: 85  IDESFKRSGSIPFKWEVQPGIPKACP----NGTSHAPPLKLRP----------------- 201
           +D+SFKR G+IPF WE++PG+PK       N T   PP KL P                 
Sbjct: 6   VDDSFKRPGTIPFSWEIRPGVPKTRMSQPGNTTPLQPPKKLSPLRFKPLSHSQPLLPPAL 65

Query: 202 -PPSEFYYSDSTHRSITPT-------------------------------RSGRRLF--- 276
            PPS  + S+S  R ++P                                RS  R F   
Sbjct: 66  SPPSSSFISNSKSRPLSPLTPHSFSTTPSKLKPPRTPSSLSGFYSPGPSFRSSPRAFSER 125

Query: 277 ---HRFNSQRLTTS-------SVVSSGCFPSPSVKVKHKVGKKNINKAGSELELGYV-SD 423
              HR N  R  +        SV   GCFPSP  +++      +  K+GS  E  Y  SD
Sbjct: 126 WQLHRPNRIRPESEPEPSSDFSVAGFGCFPSPKFRLRKVKSGGSRRKSGSRSENDYYCSD 185

Query: 424 LETLARWSVSTEKSLSPSDESP--SFLSERSPPPPAMDSEWAAFGLF 558
           +ET++ W+VS+ +S+SP  ESP  SF S R  P  A ++EW  FGLF
Sbjct: 186 METMSPWTVSSRRSVSPRWESPKSSFSSLRFSPRFANEAEWVGFGLF 232


>gb|AAW80930.1| unknown, partial [Astragalus membranaceus]
          Length = 139

 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 64/159 (40%), Positives = 83/159 (52%), Gaps = 1/159 (0%)
 Frame = +1

Query: 85  IDESFKRSGSIPFKWEVQPGIPKACPNGTSHAPP-LKLRPPPSEFYYSDSTHRSITPTRS 261
           +DESFKRSGS+PF+WEVQPG+PK+     S +P   KLRPPP     S  +H    P+RS
Sbjct: 10  MDESFKRSGSVPFQWEVQPGVPKSYAPPPSPSPTNTKLRPPP-----SSPSHGLTAPSRS 64

Query: 262 GRRLFHRFNSQRLTTSSVVSSGCFPSPSVKVKHKVGKKNINKAGSELELGYVSDLETLAR 441
              +      +R       S GCFP+ +      +G  +  KA  +L+ G  SD      
Sbjct: 65  DIGILSPRKPRR------PSRGCFPAAA----SFLGSSSKRKA--DLDFGGGSD------ 106

Query: 442 WSVSTEKSLSPSDESPSFLSERSPPPPAMDSEWAAFGLF 558
                 +S S +  SPS +   S PPPA D EWAAFGLF
Sbjct: 107 -----SRSSSSAQNSPSSM-RGSSPPPASDVEWAAFGLF 139


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