BLASTX nr result

ID: Coptis23_contig00008224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008224
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002880102.1| calcium-binding EF hand family protein [Arab...   215   3e-54
ref|XP_002270910.1| PREDICTED: uncharacterized protein LOC100249...   214   4e-54
ref|XP_002512195.1| calcium ion binding protein, putative [Ricin...   213   1e-53
ref|NP_566015.1| calcium-binding EF-hand-containing protein [Ara...   212   2e-53
ref|XP_002330899.1| predicted protein [Populus trichocarpa] gi|1...   208   4e-52

>ref|XP_002880102.1| calcium-binding EF hand family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297325941|gb|EFH56361.1| calcium-binding EF
           hand family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 142

 Score =  215 bits (548), Expect = 3e-54
 Identities = 105/140 (75%), Positives = 123/140 (87%)
 Frame = +3

Query: 9   MGVVILDGTTVRSFIEDETEFNKTVDSRFNSLDLNSDGVLSRSELRNAFESFRLLESHFG 188
           MGVV++DG+TVRSF++DE +F K+VD RF +LDLN DGVLSRSELR AFES RLLESHFG
Sbjct: 1   MGVVVIDGSTVRSFVDDEEQFKKSVDERFTALDLNKDGVLSRSELRKAFESMRLLESHFG 60

Query: 189 ISVVTPPQELTQLYDSIFEGFDEDHSGTVDLEEFRSEMKKIMLAIADGLGESPIQMVIED 368
           + VVTPP ELT+LYDSIFE FD D SG+VDLEEFRSEMKKI+LAIADGLG  PI MV++D
Sbjct: 61  VDVVTPPDELTKLYDSIFEKFDTDQSGSVDLEEFRSEMKKIVLAIADGLGSCPITMVLDD 120

Query: 369 DDQSFLKKAADLEASKIAQA 428
           D+ +FLKKAADLEASK+ +A
Sbjct: 121 DENNFLKKAADLEASKLEKA 140


>ref|XP_002270910.1| PREDICTED: uncharacterized protein LOC100249460 [Vitis vinifera]
          Length = 139

 Score =  214 bits (546), Expect = 4e-54
 Identities = 105/136 (77%), Positives = 121/136 (88%)
 Frame = +3

Query: 9   MGVVILDGTTVRSFIEDETEFNKTVDSRFNSLDLNSDGVLSRSELRNAFESFRLLESHFG 188
           MGVVI+DG+TVR F+ ++  FNK+VD RF++LDLN DGVLSRSELR AFE+FRLLE+HFG
Sbjct: 1   MGVVIIDGSTVRDFVGNDALFNKSVDDRFSALDLNGDGVLSRSELRKAFETFRLLEAHFG 60

Query: 189 ISVVTPPQELTQLYDSIFEGFDEDHSGTVDLEEFRSEMKKIMLAIADGLGESPIQMVIED 368
           + VVTPP++LTQLYDSIF+ FD DHS TVDLEEFRSEMKKIMLAIADGLG  PIQM +ED
Sbjct: 61  VDVVTPPEQLTQLYDSIFDKFDCDHSDTVDLEEFRSEMKKIMLAIADGLGSCPIQMALED 120

Query: 369 DDQSFLKKAADLEASK 416
           DDQ+FLKKAAD EASK
Sbjct: 121 DDQNFLKKAADFEASK 136


>ref|XP_002512195.1| calcium ion binding protein, putative [Ricinus communis]
           gi|223548739|gb|EEF50229.1| calcium ion binding protein,
           putative [Ricinus communis]
          Length = 143

 Score =  213 bits (542), Expect = 1e-53
 Identities = 104/137 (75%), Positives = 120/137 (87%)
 Frame = +3

Query: 9   MGVVILDGTTVRSFIEDETEFNKTVDSRFNSLDLNSDGVLSRSELRNAFESFRLLESHFG 188
           MGVV++DG+TVR F+ DE +F K+VD  F  LDLN+DGVLSRSELR AFES RL+ESHFG
Sbjct: 1   MGVVVIDGSTVRDFVNDEAQFKKSVDESFAQLDLNNDGVLSRSELRKAFESLRLIESHFG 60

Query: 189 ISVVTPPQELTQLYDSIFEGFDEDHSGTVDLEEFRSEMKKIMLAIADGLGESPIQMVIED 368
           I VVTPP++LTQLYDSIFE FD D SGTVDL+EFR+E+KKI+LAIADGLG SPIQM +ED
Sbjct: 61  IDVVTPPEQLTQLYDSIFEKFDCDKSGTVDLDEFRTEIKKILLAIADGLGSSPIQMALED 120

Query: 369 DDQSFLKKAADLEASKI 419
           DDQ FLKKAADLEASK+
Sbjct: 121 DDQGFLKKAADLEASKL 137


>ref|NP_566015.1| calcium-binding EF-hand-containing protein [Arabidopsis thaliana]
           gi|3128177|gb|AAC16081.1| expressed protein [Arabidopsis
           thaliana] gi|18252875|gb|AAL62364.1| unknown protein
           [Arabidopsis thaliana] gi|21387065|gb|AAM47936.1|
           unknown protein [Arabidopsis thaliana]
           gi|21554910|gb|AAM63727.1| unknown [Arabidopsis
           thaliana] gi|330255313|gb|AEC10407.1| calcium-binding
           EF-hand-containing protein [Arabidopsis thaliana]
          Length = 142

 Score =  212 bits (540), Expect = 2e-53
 Identities = 105/140 (75%), Positives = 121/140 (86%)
 Frame = +3

Query: 9   MGVVILDGTTVRSFIEDETEFNKTVDSRFNSLDLNSDGVLSRSELRNAFESFRLLESHFG 188
           MGVV++DG+TVRSF++DE +F K+VD RF +LDLN DGVLSRSELR AFES RLLESHFG
Sbjct: 1   MGVVLIDGSTVRSFVDDEEQFKKSVDERFAALDLNKDGVLSRSELRKAFESMRLLESHFG 60

Query: 189 ISVVTPPQELTQLYDSIFEGFDEDHSGTVDLEEFRSEMKKIMLAIADGLGESPIQMVIED 368
           + VVTP  ELT LYDSIFE FD D SG+VDLEEFRSEMKKI+LAIADGLG  PI MV++D
Sbjct: 61  VDVVTPQDELTNLYDSIFEKFDTDQSGSVDLEEFRSEMKKIVLAIADGLGSCPITMVLDD 120

Query: 369 DDQSFLKKAADLEASKIAQA 428
           DD +FLKKAADLEASK+ +A
Sbjct: 121 DDDNFLKKAADLEASKLEKA 140


>ref|XP_002330899.1| predicted protein [Populus trichocarpa] gi|118484657|gb|ABK94199.1|
           unknown [Populus trichocarpa]
           gi|222872721|gb|EEF09852.1| predicted protein [Populus
           trichocarpa]
          Length = 146

 Score =  208 bits (529), Expect = 4e-52
 Identities = 100/139 (71%), Positives = 119/139 (85%)
 Frame = +3

Query: 9   MGVVILDGTTVRSFIEDETEFNKTVDSRFNSLDLNSDGVLSRSELRNAFESFRLLESHFG 188
           MGVVI+DG+TVR F+ DE +FNK+VD  F  LDLN+DGVLSRSELR AFE+ RL+E+HFG
Sbjct: 1   MGVVIIDGSTVRDFVNDEAQFNKSVDEAFTKLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 189 ISVVTPPQELTQLYDSIFEGFDEDHSGTVDLEEFRSEMKKIMLAIADGLGESPIQMVIED 368
           + V T P+ELT LYDSIF+ FD D SG+VDLEE+RSE+KKIMLAIADGLG SPIQM +ED
Sbjct: 61  VDVATAPEELTNLYDSIFDKFDCDQSGSVDLEEYRSELKKIMLAIADGLGSSPIQMALED 120

Query: 369 DDQSFLKKAADLEASKIAQ 425
           DDQ F+K+AADLEASK+ Q
Sbjct: 121 DDQGFIKQAADLEASKLPQ 139


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