BLASTX nr result
ID: Coptis23_contig00008221
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00008221
(822 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI34862.3| unnamed protein product [Vitis vinifera] 175 5e-80
ref|NP_001242362.1| uncharacterized protein LOC100793209 [Glycin... 166 5e-75
ref|XP_003547716.1| PREDICTED: RNA-binding protein Musashi homol... 164 1e-74
ref|XP_003553735.1| PREDICTED: heterogeneous nuclear ribonucleop... 162 2e-74
gb|AFK38101.1| unknown [Lotus japonicus] gi|388508218|gb|AFK4217... 162 2e-74
>emb|CBI34862.3| unnamed protein product [Vitis vinifera]
Length = 281
Score = 175 bits (444), Expect(2) = 5e-80
Identities = 84/124 (67%), Positives = 102/124 (82%)
Frame = -2
Query: 491 THVINGKQVEIKRTIPKGSITSRDIKTKKIFVGGIPTTVTEDELKEFFAKFGEVKEHMIM 312
THVINGKQVEIKRTIPKG+I ++D KTKKIFVGGIP TVTE+E K+FF ++GEVK+H IM
Sbjct: 102 THVINGKQVEIKRTIPKGAIGAKDFKTKKIFVGGIPATVTEEEFKDFFTQYGEVKDHQIM 161
Query: 311 RDHATSRSRGFGFITFETEQSVDGLLSKGNKIEMAGAQVEIXXXXXXXXXXXXXXXKRFN 132
RDH+TSRSRGFGF+TF+TEQ+VD LLS+GNK+E+AGAQVEI +R++
Sbjct: 162 RDHSTSRSRGFGFVTFDTEQAVDDLLSQGNKLELAGAQVEIKKAEPKKPNPPVPPSRRYS 221
Query: 131 DSRP 120
DSRP
Sbjct: 222 DSRP 225
Score = 149 bits (376), Expect(2) = 5e-80
Identities = 70/87 (80%), Positives = 79/87 (90%)
Frame = -3
Query: 820 NNNNEMEEKFHPHTGDGASPGKIFIGGLAKETTPVQFNKHFGKYGEITDSVIMKDRKSGQ 641
++ ++ + K HPHTGDGASPGKIFIGGLA+ETT QF KHFGKYGEITDSVIMKDRK+GQ
Sbjct: 21 HHTDDNDSKPHPHTGDGASPGKIFIGGLARETTSAQFIKHFGKYGEITDSVIMKDRKTGQ 80
Query: 640 PRGFGFVTYADPSVVDKVIEDTHVING 560
PRGFGFVTYAD SVVD+VI+DTHVING
Sbjct: 81 PRGFGFVTYADLSVVDQVIQDTHVING 107
Score = 56.6 bits (135), Expect = 6e-06
Identities = 28/73 (38%), Positives = 43/73 (58%)
Frame = -2
Query: 407 KIFVGGIPTTVTEDELKEFFAKFGEVKEHMIMRDHATSRSRGFGFITFETEQSVDGLLSK 228
KIF+GG+ T + + F K+GE+ + +IM+D T + RGFGF+T+ VD ++
Sbjct: 42 KIFIGGLARETTSAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADLSVVDQVIQD 101
Query: 227 GNKIEMAGAQVEI 189
+ I G QVEI
Sbjct: 102 THVIN--GKQVEI 112
>ref|NP_001242362.1| uncharacterized protein LOC100793209 [Glycine max]
gi|255636483|gb|ACU18580.1| unknown [Glycine max]
Length = 377
Score = 166 bits (420), Expect(2) = 5e-75
Identities = 80/122 (65%), Positives = 98/122 (80%)
Frame = -2
Query: 488 HVINGKQVEIKRTIPKGSITSRDIKTKKIFVGGIPTTVTEDELKEFFAKFGEVKEHMIMR 309
HVINGKQVEIKRTIP+G++ S+D +TKKIFVGGIP+ VTEDE ++FF ++GEVK+H IMR
Sbjct: 104 HVINGKQVEIKRTIPRGAVGSKDFRTKKIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIMR 163
Query: 308 DHATSRSRGFGFITFETEQSVDGLLSKGNKIEMAGAQVEIXXXXXXXXXXXXXXXKRFND 129
DH+T+RSRGFGFITFE+E++VD LLS GNKI+ AGAQVEI KR+ND
Sbjct: 164 DHSTNRSRGFGFITFESEEAVDDLLSMGNKIDFAGAQVEIKKAEPKKPNSAPPSSKRYND 223
Query: 128 SR 123
SR
Sbjct: 224 SR 225
Score = 142 bits (357), Expect(2) = 5e-75
Identities = 68/86 (79%), Positives = 74/86 (86%)
Frame = -3
Query: 817 NNNEMEEKFHPHTGDGASPGKIFIGGLAKETTPVQFNKHFGKYGEITDSVIMKDRKSGQP 638
++ E P TGDGASPGKIFIGGLA+ETT QF KHFGKYGEITDSVIMKDRK+GQP
Sbjct: 23 SHREEPHNSQPLTGDGASPGKIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQP 82
Query: 637 RGFGFVTYADPSVVDKVIEDTHVING 560
RGFGF+TYADPSVVDKVIE+ HVING
Sbjct: 83 RGFGFITYADPSVVDKVIEEPHVING 108
Score = 57.4 bits (137), Expect = 4e-06
Identities = 29/73 (39%), Positives = 44/73 (60%)
Frame = -2
Query: 407 KIFVGGIPTTVTEDELKEFFAKFGEVKEHMIMRDHATSRSRGFGFITFETEQSVDGLLSK 228
KIF+GG+ T + + F K+GE+ + +IM+D T + RGFGFIT+ VD ++ +
Sbjct: 43 KIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDKVIEE 102
Query: 227 GNKIEMAGAQVEI 189
+ I G QVEI
Sbjct: 103 PHVIN--GKQVEI 113
Score = 56.6 bits (135), Expect = 6e-06
Identities = 23/58 (39%), Positives = 35/58 (60%)
Frame = -3
Query: 757 KIFIGGLAKETTPVQFNKHFGKYGEITDSVIMKDRKSGQPRGFGFVTYADPSVVDKVI 584
KIF+GG+ T +F F +YGE+ D IM+D + + RGFGF+T+ VD ++
Sbjct: 131 KIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITFESEEAVDDLL 188
>ref|XP_003547716.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Glycine
max]
Length = 372
Score = 164 bits (414), Expect(2) = 1e-74
Identities = 80/125 (64%), Positives = 100/125 (80%), Gaps = 2/125 (1%)
Frame = -2
Query: 491 THVINGKQVEIKRTIPKGSI--TSRDIKTKKIFVGGIPTTVTEDELKEFFAKFGEVKEHM 318
TH+INGKQVEIKRTIP+G++ S+D +TKKIFVGGIP+TVTEDE ++FF ++GEVK+H
Sbjct: 103 THIINGKQVEIKRTIPRGAVGSNSKDFRTKKIFVGGIPSTVTEDEFRDFFTRYGEVKDHQ 162
Query: 317 IMRDHATSRSRGFGFITFETEQSVDGLLSKGNKIEMAGAQVEIXXXXXXXXXXXXXXXKR 138
IMRDH+T+RSRGFGFIT+++E++VD LLS GNKIE AGAQVEI KR
Sbjct: 163 IMRDHSTNRSRGFGFITYDSEEAVDDLLSVGNKIEFAGAQVEIKKAEPKKPNPPAPSSKR 222
Query: 137 FNDSR 123
+NDSR
Sbjct: 223 YNDSR 227
Score = 143 bits (360), Expect(2) = 1e-74
Identities = 68/86 (79%), Positives = 76/86 (88%)
Frame = -3
Query: 817 NNNEMEEKFHPHTGDGASPGKIFIGGLAKETTPVQFNKHFGKYGEITDSVIMKDRKSGQP 638
++ + + K P TGDGASPGKIFIGGLA+ETT QF KHFGKYGEITDSVIMKDRK+GQP
Sbjct: 23 SHRDDDGKPQPLTGDGASPGKIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQP 82
Query: 637 RGFGFVTYADPSVVDKVIEDTHVING 560
RGFGF+TYADPSVVD VIEDTH+ING
Sbjct: 83 RGFGFITYADPSVVDTVIEDTHIING 108
Score = 57.4 bits (137), Expect = 4e-06
Identities = 24/58 (41%), Positives = 35/58 (60%)
Frame = -3
Query: 757 KIFIGGLAKETTPVQFNKHFGKYGEITDSVIMKDRKSGQPRGFGFVTYADPSVVDKVI 584
KIF+GG+ T +F F +YGE+ D IM+D + + RGFGF+TY VD ++
Sbjct: 133 KIFVGGIPSTVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITYDSEEAVDDLL 190
Score = 56.2 bits (134), Expect = 8e-06
Identities = 29/73 (39%), Positives = 43/73 (58%)
Frame = -2
Query: 407 KIFVGGIPTTVTEDELKEFFAKFGEVKEHMIMRDHATSRSRGFGFITFETEQSVDGLLSK 228
KIF+GG+ T + + F K+GE+ + +IM+D T + RGFGFIT+ VD ++
Sbjct: 43 KIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDTVIED 102
Query: 227 GNKIEMAGAQVEI 189
+ I G QVEI
Sbjct: 103 THIIN--GKQVEI 113
>ref|XP_003553735.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
2-like [Glycine max]
Length = 374
Score = 162 bits (410), Expect(2) = 2e-74
Identities = 80/125 (64%), Positives = 99/125 (79%), Gaps = 2/125 (1%)
Frame = -2
Query: 491 THVINGKQVEIKRTIPKGSI--TSRDIKTKKIFVGGIPTTVTEDELKEFFAKFGEVKEHM 318
TH+INGKQVEIKRTIP+G+ S+D +TKKIFVGGIP+TVTEDE ++FF ++GEVK+H
Sbjct: 105 THIINGKQVEIKRTIPRGAAGSNSKDFRTKKIFVGGIPSTVTEDEFRDFFTRYGEVKDHQ 164
Query: 317 IMRDHATSRSRGFGFITFETEQSVDGLLSKGNKIEMAGAQVEIXXXXXXXXXXXXXXXKR 138
IMRDH+T+RSRGFGFIT+++E++VD LLS GNKIE AGAQVEI KR
Sbjct: 165 IMRDHSTNRSRGFGFITYDSEEAVDDLLSVGNKIEFAGAQVEIKKAEPKKPNPPAPSSKR 224
Query: 137 FNDSR 123
+NDSR
Sbjct: 225 YNDSR 229
Score = 144 bits (362), Expect(2) = 2e-74
Identities = 68/87 (78%), Positives = 77/87 (88%)
Frame = -3
Query: 820 NNNNEMEEKFHPHTGDGASPGKIFIGGLAKETTPVQFNKHFGKYGEITDSVIMKDRKSGQ 641
+ +++ + K P TGDGASPGKIFIGGLA+ETT QF KHFGKYGEITDSVIMKDRK+GQ
Sbjct: 24 HRDDDEDGKPQPLTGDGASPGKIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQ 83
Query: 640 PRGFGFVTYADPSVVDKVIEDTHVING 560
PRGFGF+TYADPSVVD VIEDTH+ING
Sbjct: 84 PRGFGFITYADPSVVDTVIEDTHIING 110
Score = 57.4 bits (137), Expect = 4e-06
Identities = 24/58 (41%), Positives = 35/58 (60%)
Frame = -3
Query: 757 KIFIGGLAKETTPVQFNKHFGKYGEITDSVIMKDRKSGQPRGFGFVTYADPSVVDKVI 584
KIF+GG+ T +F F +YGE+ D IM+D + + RGFGF+TY VD ++
Sbjct: 135 KIFVGGIPSTVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITYDSEEAVDDLL 192
Score = 56.2 bits (134), Expect = 8e-06
Identities = 29/73 (39%), Positives = 43/73 (58%)
Frame = -2
Query: 407 KIFVGGIPTTVTEDELKEFFAKFGEVKEHMIMRDHATSRSRGFGFITFETEQSVDGLLSK 228
KIF+GG+ T + + F K+GE+ + +IM+D T + RGFGFIT+ VD ++
Sbjct: 45 KIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDTVIED 104
Query: 227 GNKIEMAGAQVEI 189
+ I G QVEI
Sbjct: 105 THIIN--GKQVEI 115
>gb|AFK38101.1| unknown [Lotus japonicus] gi|388508218|gb|AFK42175.1| unknown
[Lotus japonicus]
Length = 373
Score = 162 bits (411), Expect(2) = 2e-74
Identities = 78/123 (63%), Positives = 97/123 (78%)
Frame = -2
Query: 491 THVINGKQVEIKRTIPKGSITSRDIKTKKIFVGGIPTTVTEDELKEFFAKFGEVKEHMIM 312
TH+INGKQVEIKRTIP+G++ S+D KTKKIFVGGIP+ VTEDE ++FF ++GEVK++ IM
Sbjct: 106 THIINGKQVEIKRTIPRGAVGSKDFKTKKIFVGGIPSNVTEDEFRDFFTRYGEVKDNQIM 165
Query: 311 RDHATSRSRGFGFITFETEQSVDGLLSKGNKIEMAGAQVEIXXXXXXXXXXXXXXXKRFN 132
RDH+T+RSRGFGFITF++E +VD LLS GNKI+ AG QVEI KR+N
Sbjct: 166 RDHSTNRSRGFGFITFDSEDAVDDLLSMGNKIDFAGTQVEIKKAEPKKPNPPTPSSKRYN 225
Query: 131 DSR 123
DSR
Sbjct: 226 DSR 228
Score = 143 bits (360), Expect(2) = 2e-74
Identities = 67/85 (78%), Positives = 74/85 (87%)
Frame = -3
Query: 814 NNEMEEKFHPHTGDGASPGKIFIGGLAKETTPVQFNKHFGKYGEITDSVIMKDRKSGQPR 635
+++ P TGDGASPGKIFIGGLA+ETT QF KHFGKYGEITDSVIMKDRK+ QPR
Sbjct: 27 DHDQHHNSQPLTGDGASPGKIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTAQPR 86
Query: 634 GFGFVTYADPSVVDKVIEDTHVING 560
GFGF+TYADPSVVDKVIEDTH+ING
Sbjct: 87 GFGFITYADPSVVDKVIEDTHIING 111
Score = 57.0 bits (136), Expect = 5e-06
Identities = 23/58 (39%), Positives = 36/58 (62%)
Frame = -3
Query: 757 KIFIGGLAKETTPVQFNKHFGKYGEITDSVIMKDRKSGQPRGFGFVTYADPSVVDKVI 584
KIF+GG+ T +F F +YGE+ D+ IM+D + + RGFGF+T+ VD ++
Sbjct: 134 KIFVGGIPSNVTEDEFRDFFTRYGEVKDNQIMRDHSTNRSRGFGFITFDSEDAVDDLL 191
Score = 56.6 bits (135), Expect = 6e-06
Identities = 29/73 (39%), Positives = 44/73 (60%)
Frame = -2
Query: 407 KIFVGGIPTTVTEDELKEFFAKFGEVKEHMIMRDHATSRSRGFGFITFETEQSVDGLLSK 228
KIF+GG+ T + + F K+GE+ + +IM+D T++ RGFGFIT+ VD ++
Sbjct: 46 KIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTAQPRGFGFITYADPSVVDKVIED 105
Query: 227 GNKIEMAGAQVEI 189
+ I G QVEI
Sbjct: 106 THIIN--GKQVEI 116