BLASTX nr result

ID: Coptis23_contig00008217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008217
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003614094.1| Kinase-like protein [Medicago truncatula] gi...    63   3e-08
ref|XP_003612512.1| Receptor-like protein kinase [Medicago trunc...    61   1e-07
ref|XP_003551548.1| PREDICTED: probable LRR receptor-like serine...    60   2e-07
ref|XP_002875847.1| hypothetical protein ARALYDRAFT_347851 [Arab...    57   2e-06
ref|XP_004138566.1| PREDICTED: probable LRR receptor-like serine...    57   2e-06

>ref|XP_003614094.1| Kinase-like protein [Medicago truncatula]
           gi|355515429|gb|AES97052.1| Kinase-like protein
           [Medicago truncatula]
          Length = 1033

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/67 (47%), Positives = 41/67 (61%)
 Frame = -1

Query: 202 MAIMISVAVFILLASCSLIFYLRRKSKLKTASSQSFSDQHVKVSYGDLSQATGGFSPTNF 23
           MA+++SV  F+++    +  YLRRK   K +S     DQ   VSY DL QAT GFS  N 
Sbjct: 660 MAVIVSVISFVIIMLLIVAIYLRRKRNKKPSSDSPTIDQLPMVSYQDLYQATDGFSDRNL 719

Query: 22  VGSGGFG 2
           +GSGGFG
Sbjct: 720 IGSGGFG 726


>ref|XP_003612512.1| Receptor-like protein kinase [Medicago truncatula]
           gi|355513847|gb|AES95470.1| Receptor-like protein kinase
           [Medicago truncatula]
          Length = 1010

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
 Frame = -1

Query: 202 MAIMISVAVFILLASCSL-IFYLRRKSKLKTASSQSFSDQHVKVSYGDLSQATGGFSPTN 26
           + +++SV  FI++    L I+YL RK   K +S     DQ   VSY DL QAT GFS  N
Sbjct: 641 IVVIVSVVAFIIMTMLILAIYYLMRKRNKKPSSDSPIIDQLAMVSYQDLYQATDGFSSRN 700

Query: 25  FVGSGGFG 2
            +GSGGFG
Sbjct: 701 LIGSGGFG 708


>ref|XP_003551548.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570-like [Glycine max]
          Length = 1020

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/71 (38%), Positives = 44/71 (61%)
 Frame = -1

Query: 214 DPSKMAIMISVAVFILLASCSLIFYLRRKSKLKTASSQSFSDQHVKVSYGDLSQATGGFS 35
           DP  +  +I   VF+LL  C L   + ++++ K + S +  D  +++SY ++++ TGGFS
Sbjct: 639 DPKVVISVIVALVFVLLLFCFLAISMVKRARKKASRSTTTKDLDLQISYSEIAKCTGGFS 698

Query: 34  PTNFVGSGGFG 2
           P N VGSG FG
Sbjct: 699 PDNLVGSGSFG 709


>ref|XP_002875847.1| hypothetical protein ARALYDRAFT_347851 [Arabidopsis lyrata subsp.
           lyrata] gi|297321685|gb|EFH52106.1| hypothetical protein
           ARALYDRAFT_347851 [Arabidopsis lyrata subsp. lyrata]
          Length = 1012

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 5/73 (6%)
 Frame = -1

Query: 205 KMAIMISVAVFILL----ASCSLIFYLRRKSKLKTAS-SQSFSDQHVKVSYGDLSQATGG 41
           K+ I +SV++ +LL    AS SLI+  +RK   +T + + S    H K+SYGDL  AT G
Sbjct: 644 KVVIGVSVSITLLLLLFIASVSLIWLRKRKKNKQTNNPTPSLEVFHEKISYGDLRNATNG 703

Query: 40  FSPTNFVGSGGFG 2
           FS +N VGSG FG
Sbjct: 704 FSSSNMVGSGSFG 716


>ref|XP_004138566.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570-like [Cucumis sativus]
          Length = 1023

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
 Frame = -1

Query: 208 SKMAIMISVA---VFILLASCSLIFYLRRKSKLKTASSQSFSDQHVKVSYGDLSQATGGF 38
           +K+ I+ISV    V  LL  C L+F+  RK K K+  S S    +  VSY DL +AT  F
Sbjct: 652 TKLKIIISVVSGLVGALLIICCLLFFWSRKKKNKSDLSPSLKASYFAVSYNDLLKATNEF 711

Query: 37  SPTNFVGSGGFG 2
           SP N +G GG+G
Sbjct: 712 SPDNLIGVGGYG 723


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