BLASTX nr result

ID: Coptis23_contig00008214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008214
         (1038 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95546.1| unknown [Populus trichocarpa]                          236   7e-60
ref|XP_002512714.1| conserved hypothetical protein [Ricinus comm...   232   1e-58
ref|XP_002269057.2| PREDICTED: uncharacterized protein LOC100260...   227   3e-57
ref|XP_002304619.1| predicted protein [Populus trichocarpa] gi|2...   223   8e-56
ref|NP_001237895.1| uncharacterized protein LOC100306634 [Glycin...   222   1e-55

>gb|ABK95546.1| unknown [Populus trichocarpa]
          Length = 223

 Score =  236 bits (602), Expect = 7e-60
 Identities = 118/148 (79%), Positives = 129/148 (87%), Gaps = 8/148 (5%)
 Frame = +3

Query: 234 GVLPNSNSSTNYVVPLDNS------SCITRPLAEILRDLNKRVPDNIIKP--DANFCIPW 389
           GV      ++NYVVPLDNS      SCITRPL+EILRDLNKR+PDNIIKP   ++  IPW
Sbjct: 73  GVKKKGVPNSNYVVPLDNSLASAYTSCITRPLSEILRDLNKRIPDNIIKPPNSSSTLIPW 132

Query: 390 YHANRMLSFYAPGWCGEIRDVIFSENGSVTVVYRVTIRGSDGEAHRESTGTVSSSDIHIE 569
           +HANRMLSFYAPGWCGEIRDVIF+ENGSVTVVYRVTIRGSDGEAHRES+GTVSSSD+ IE
Sbjct: 133 FHANRMLSFYAPGWCGEIRDVIFAENGSVTVVYRVTIRGSDGEAHRESSGTVSSSDVAIE 192

Query: 570 DPVAAAEEIAFSRACARFGLGLYLYHED 653
           DPVAAAEEIAF RACARFGLGLYLYHE+
Sbjct: 193 DPVAAAEEIAFCRACARFGLGLYLYHEE 220


>ref|XP_002512714.1| conserved hypothetical protein [Ricinus communis]
           gi|223548675|gb|EEF50166.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 220

 Score =  232 bits (591), Expect = 1e-58
 Identities = 124/194 (63%), Positives = 140/194 (72%), Gaps = 26/194 (13%)
 Frame = +3

Query: 150 ISTKMNTDNTNIIIKMSPKKTRMASLVSGVLPNSNSS--------------------TNY 269
           I+  +N +   ++   S  + R+  +V G   N+N+S                    +NY
Sbjct: 28  ININININMNKVLELRSGNRRRLRRVVCGSNGNNNNSEVGGGGTGTGNTNKKKGVPNSNY 87

Query: 270 VVPLDNS------SCITRPLAEILRDLNKRVPDNIIKPDANFCIPWYHANRMLSFYAPGW 431
           VVPLD S      SCITRPLAEILRDLNKR+PDNII P   F IPWYHANRMLSFYAPGW
Sbjct: 88  VVPLDKSFSSSYSSCITRPLAEILRDLNKRIPDNIITPSNTF-IPWYHANRMLSFYAPGW 146

Query: 432 CGEIRDVIFSENGSVTVVYRVTIRGSDGEAHRESTGTVSSSDIHIEDPVAAAEEIAFSRA 611
           CGEIRDVIFS+NGSVTVVYRVTIRGSDGEA+RESTGTVS SD HI DPVAAAEEIAF +A
Sbjct: 147 CGEIRDVIFSDNGSVTVVYRVTIRGSDGEAYRESTGTVSPSDGHIVDPVAAAEEIAFCKA 206

Query: 612 CARFGLGLYLYHED 653
           CARFGLGLYLYHE+
Sbjct: 207 CARFGLGLYLYHEE 220


>ref|XP_002269057.2| PREDICTED: uncharacterized protein LOC100260946 [Vitis vinifera]
          Length = 209

 Score =  227 bits (579), Expect = 3e-57
 Identities = 113/139 (81%), Positives = 124/139 (89%), Gaps = 1/139 (0%)
 Frame = +3

Query: 240 LPNSNSSTNYVVPLD-NSSCITRPLAEILRDLNKRVPDNIIKPDANFCIPWYHANRMLSF 416
           +PNSN    YVVPLD +SSCITRPL EILRDLNKR+PDNI+K + +  IPWYHANRMLSF
Sbjct: 76  VPNSN----YVVPLDMSSSCITRPLVEILRDLNKRIPDNIVKHEDSLPIPWYHANRMLSF 131

Query: 417 YAPGWCGEIRDVIFSENGSVTVVYRVTIRGSDGEAHRESTGTVSSSDIHIEDPVAAAEEI 596
           YAPGWCGEIRDVIFS+NGSVTVVYRVT+RGSDGEAHRESTGTV  +D H+ DPVAAAEEI
Sbjct: 132 YAPGWCGEIRDVIFSDNGSVTVVYRVTVRGSDGEAHRESTGTVLPTDGHV-DPVAAAEEI 190

Query: 597 AFSRACARFGLGLYLYHED 653
           AF RACARFGLGLYLYHE+
Sbjct: 191 AFCRACARFGLGLYLYHEE 209


>ref|XP_002304619.1| predicted protein [Populus trichocarpa] gi|222842051|gb|EEE79598.1|
           predicted protein [Populus trichocarpa]
          Length = 125

 Score =  223 bits (567), Expect = 8e-56
 Identities = 107/124 (86%), Positives = 117/124 (94%), Gaps = 2/124 (1%)
 Frame = +3

Query: 288 SSCITRPLAEILRDLNKRVPDNIIKP--DANFCIPWYHANRMLSFYAPGWCGEIRDVIFS 461
           +SCITRPL+EILRDLNKR+PDNIIKP   ++  IPW+HANRMLSFYAPGWCGEIRDVIF+
Sbjct: 1   TSCITRPLSEILRDLNKRIPDNIIKPPNSSSTLIPWFHANRMLSFYAPGWCGEIRDVIFA 60

Query: 462 ENGSVTVVYRVTIRGSDGEAHRESTGTVSSSDIHIEDPVAAAEEIAFSRACARFGLGLYL 641
           ENGSVTVVYRVTIRGSDGEAHRES+GTVSSSD+ IEDPVAAAEEIAF RACARFGLGLYL
Sbjct: 61  ENGSVTVVYRVTIRGSDGEAHRESSGTVSSSDVAIEDPVAAAEEIAFCRACARFGLGLYL 120

Query: 642 YHED 653
           YHE+
Sbjct: 121 YHEE 124


>ref|NP_001237895.1| uncharacterized protein LOC100306634 [Glycine max]
           gi|255629135|gb|ACU14912.1| unknown [Glycine max]
          Length = 202

 Score =  222 bits (566), Expect = 1e-55
 Identities = 109/136 (80%), Positives = 122/136 (89%), Gaps = 3/136 (2%)
 Frame = +3

Query: 255 SSTNYVVPLDN---SSCITRPLAEILRDLNKRVPDNIIKPDANFCIPWYHANRMLSFYAP 425
           S++NYVVPLDN   SSCITRPLAEILRDLNKR+PD I+K D    IPW+HANRMLSFYAP
Sbjct: 64  SNSNYVVPLDNMANSSCITRPLAEILRDLNKRIPDTIVKHDR--FIPWHHANRMLSFYAP 121

Query: 426 GWCGEIRDVIFSENGSVTVVYRVTIRGSDGEAHRESTGTVSSSDIHIEDPVAAAEEIAFS 605
           GWCGEIRDVIFS+NGSVTVVYR+T+RGSDGEA+RESTGT+S SD  I DPV+AAEEIAF 
Sbjct: 122 GWCGEIRDVIFSDNGSVTVVYRLTVRGSDGEAYRESTGTISPSDGSIGDPVSAAEEIAFC 181

Query: 606 RACARFGLGLYLYHED 653
           ++CARFGLGLYLYHED
Sbjct: 182 KSCARFGLGLYLYHED 197


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