BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008210
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303496.1| f-box family protein [Populus trichocarpa] g...    85   7e-15
emb|CBI38670.3| unnamed protein product [Vitis vinifera]               83   2e-14
ref|XP_002263969.1| PREDICTED: F-box protein At5g07670 [Vitis vi...    83   2e-14
emb|CAN82961.1| hypothetical protein VITISV_040234 [Vitis vinifera]    83   2e-14
ref|XP_003527558.1| PREDICTED: F-box protein At5g07670-like isof...    83   3e-14

>ref|XP_002303496.1| f-box family protein [Populus trichocarpa]
           gi|222840928|gb|EEE78475.1| f-box family protein
           [Populus trichocarpa]
          Length = 551

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/62 (66%), Positives = 51/62 (82%)
 Frame = -1

Query: 188 LLSDTLVLQILINLPSTSPQQNPNSLVCKKWMYLLGQLVTSIKLLDWNFLESGRLVSRFP 9
           LL D L+L+IL  LP +  Q+NPNSLVCK+W+ L G+LV S+K+LDW FLESGRL+SRFP
Sbjct: 91  LLGDDLLLKILSKLPDS--QRNPNSLVCKRWLNLQGRLVRSLKVLDWEFLESGRLLSRFP 148

Query: 8   NL 3
           NL
Sbjct: 149 NL 150


>emb|CBI38670.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/62 (64%), Positives = 51/62 (82%)
 Frame = -1

Query: 188 LLSDTLVLQILINLPSTSPQQNPNSLVCKKWMYLLGQLVTSIKLLDWNFLESGRLVSRFP 9
           LLSD L+L++   LP +  Q+ PNSLVCK+W+ L G+LV S+KLL+W+FLESGRLVSRFP
Sbjct: 65  LLSDELLLRVFQKLPES--QRKPNSLVCKRWLSLQGRLVQSVKLLEWDFLESGRLVSRFP 122

Query: 8   NL 3
           NL
Sbjct: 123 NL 124


>ref|XP_002263969.1| PREDICTED: F-box protein At5g07670 [Vitis vinifera]
          Length = 478

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/62 (64%), Positives = 51/62 (82%)
 Frame = -1

Query: 188 LLSDTLVLQILINLPSTSPQQNPNSLVCKKWMYLLGQLVTSIKLLDWNFLESGRLVSRFP 9
           LLSD L+L++   LP +  Q+ PNSLVCK+W+ L G+LV S+KLL+W+FLESGRLVSRFP
Sbjct: 65  LLSDELLLRVFQKLPES--QRKPNSLVCKRWLSLQGRLVQSVKLLEWDFLESGRLVSRFP 122

Query: 8   NL 3
           NL
Sbjct: 123 NL 124


>emb|CAN82961.1| hypothetical protein VITISV_040234 [Vitis vinifera]
          Length = 485

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/62 (64%), Positives = 51/62 (82%)
 Frame = -1

Query: 188 LLSDTLVLQILINLPSTSPQQNPNSLVCKKWMYLLGQLVTSIKLLDWNFLESGRLVSRFP 9
           LLSD L+L++   LP +  Q+ PNSLVCK+W+ L G+LV S+KLL+W+FLESGRLVSRFP
Sbjct: 65  LLSDELLLRVFQKLPES--QRKPNSLVCKRWLSLQGRLVQSVKLLEWDFLESGRLVSRFP 122

Query: 8   NL 3
           NL
Sbjct: 123 NL 124


>ref|XP_003527558.1| PREDICTED: F-box protein At5g07670-like isoform 2 [Glycine max]
          Length = 489

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 37/62 (59%), Positives = 52/62 (83%)
 Frame = -1

Query: 188 LLSDTLVLQILINLPSTSPQQNPNSLVCKKWMYLLGQLVTSIKLLDWNFLESGRLVSRFP 9
           LLSD L+L+IL  LP +S Q+N NSLVCK+W+ L G+LV ++++LDW+F+ SGRL++RFP
Sbjct: 51  LLSDELLLRILSKLPDSSQQRNSNSLVCKRWLNLQGRLVRTLRVLDWSFVLSGRLINRFP 110

Query: 8   NL 3
           NL
Sbjct: 111 NL 112