BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008208
         (925 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535407.1| conserved hypothetical protein [Ricinus comm...   106   9e-21
ref|XP_003589011.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   100   8e-19
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...    97   4e-18
ref|NP_178506.3| F-box/FBD/LRR-repeat protein [Arabidopsis thali...    94   5e-17
gb|AAD27915.1| hypothetical protein [Arabidopsis thaliana]             94   5e-17

>ref|XP_002535407.1| conserved hypothetical protein [Ricinus communis]
           gi|223523200|gb|EEF26976.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 337

 Score =  106 bits (264), Expect = 9e-21
 Identities = 71/266 (26%), Positives = 127/266 (47%), Gaps = 23/266 (8%)
 Frame = +1

Query: 148 DMISYLPQEIRDHIVSFLPLE-DAIRTSILSKQWRKVCSTLSNLDFNQRHFFRLE----- 309
           D+IS LP  +  HI+S L  + DA RTSILSK+WR + ++   LDF+QR F + E     
Sbjct: 70  DLISQLPNHVIHHILSLLRCKKDAARTSILSKRWRAIWASYLILDFDQRKFQKQEKKVRR 129

Query: 310 -------------NRNLQDFKAFIYQTINLHDESD--IELFKLYVDQADDEFVCHISEWV 444
                        N+  + F+AF+  T+  H E D  I+ FKL++   + E   H+ +W+
Sbjct: 130 LSSKSKKRKEVEINKKNEMFRAFVENTLRTHIEQDSGIQKFKLHLTSYNVELSAHVDQWI 189

Query: 445 SFAFAHDVRQLQLWV--LDDECQKFPFCLFSSDSLTSLILVNINLKLPKNVKFPNLRYSR 618
            FA  ++++ L L++    D C   P  +F++ ++T+L +    L+   ++K  NL+   
Sbjct: 190 GFATTNNIKDLDLYIPSKKDRCYNLPQTVFAASTITALRISGCKLRTCIDIKLSNLQKLC 249

Query: 619 FFMVEFFDDDTADQFFSNCPVLETFRFQTCSMRHHNIFTISAPNLKFLMLETMYSPPEIK 798
           F  +   D         +CP+++  R   C+        +S+  L  + +   +    ++
Sbjct: 250 FAKLR-VDGQMIQNLMLSCPLIDDLRLIYCT--GLKTLLLSSNKLYRVDIHFCHGLKNVE 306

Query: 799 ITSTNLQQIIFNGTPPPAVNLYAASC 876
           + S NLQ   ++G       +  A C
Sbjct: 307 VLSPNLQTFWYHGKKSTRCKINLAMC 332


>ref|XP_003589011.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478059|gb|AES59262.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 528

 Score = 99.8 bits (247), Expect = 8e-19
 Identities = 76/219 (34%), Positives = 105/219 (47%), Gaps = 15/219 (6%)
 Frame = +1

Query: 148 DMISYLPQEIRDHIVSFLPLEDAIRTSILSKQWRKVCSTLSNLDFNQR-----------H 294
           D IS+LP  + D I+S+LP+ DA+RTS+LS+ WRK   TL NL F+ +            
Sbjct: 15  DRISWLPGHVIDQIMSYLPIRDAVRTSVLSRNWRKKWYTLPNLVFDTKLVPVPAATSGDP 74

Query: 295 FFRLENRNLQDFKAFIYQTINLHDESDIELFKL-YVD--QADDEFVCHISEWVSFAFAHD 465
              ++N+ LQ     I   + L     I +FK   VD    +D  V +I  W+       
Sbjct: 75  LAIIDNKFLQ-----IVDHVLLVHSGPINMFKFSNVDDLMGEDSLVTNIDRWILHLIGRS 129

Query: 466 VRQLQLWVLDDECQKFPFCLFSSDSLTSLILVNINLKLPKNVK-FPNLRYSRFFMVEFFD 642
           +++L L V  D+  K P+CLFS  SL SL L    LK P   + F NL+     +V    
Sbjct: 130 IKELVLEVWIDDYYKLPWCLFSCQSLHSLKLNGCLLKPPTMFEGFRNLKSLDLCLVNIV- 188

Query: 643 DDTADQFFSNCPVLETFRFQTCSMRHHNIFTISAPNLKF 759
            D  + F S CP+LE  R +           I APNLKF
Sbjct: 189 QDAFENFISRCPLLEKLRLR--EFYGLTQINIHAPNLKF 225


>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 97.4 bits (241), Expect = 4e-18
 Identities = 81/259 (31%), Positives = 122/259 (47%), Gaps = 9/259 (3%)
 Frame = +1

Query: 124 QEEKKRRSDMISYLPQEIRDHIVSFLPLEDAIRTSILSKQWRKVCSTLSNLDFNQRHFFR 303
           ++E       I  LP  + +HI+SFL  E A+RTSILSK+W  +  + +NL      FF 
Sbjct: 18  EKETDSGEKSIGNLPDALLEHILSFLSTEAAVRTSILSKKWLHLWKSTTNLT-----FFG 72

Query: 304 LENRNLQDFKAFIYQTINLHDESDIELFKLYVDQADDEFVCHISEWVSFAFAHDVRQLQL 483
           L++   + F  F+ + + L   S+I  F L  +  DD     +  W+S A   +V+ L L
Sbjct: 73  LKSPKRKLFMDFVDRVLALRGPSNIVQFYLSCEVKDDP--SRVGTWISAAVNRNVKDLYL 130

Query: 484 WVLDDECQ-KFPFCLFSSDSLTSL-ILVNINLKLPKNVKFPNLRYSRFFMVEFFDDDTAD 657
            + D E     P CLF+ ++LT L I +   LKLP ++    L+    + V F DD +  
Sbjct: 131 ELRDFEASFVLPHCLFNCETLTELEINMPYILKLPSSISLSCLKILNLYEVIFTDDHSTQ 190

Query: 658 QFFSNCPVLETFRFQTCSMRHHNIFTISAPNLKFLML-ETMYSPP------EIKITSTNL 816
           Q FS  P L       C+  +    +ISAP L+ L + E   S P       ++I  T+L
Sbjct: 191 QLFS-LPNLVELEIHECNWMNLVAVSISAPKLQSLDIHEPCQSSPASLGGCHVRIFGTHL 249

Query: 817 QQIIFNGTPPPAVNLYAAS 873
                 GT      LY +S
Sbjct: 250 ADFTIIGTLSNDYCLYESS 268


>ref|NP_178506.3| F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
           gi|75223245|sp|Q6NKX3.1|FDL14_ARATH RecName:
           Full=F-box/FBD/LRR-repeat protein At2g04230
           gi|46518465|gb|AAS99714.1| At2g04230 [Arabidopsis
           thaliana] gi|51971311|dbj|BAD44320.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|330250715|gb|AEC05809.1| F-box/FBD/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 448

 Score = 94.0 bits (232), Expect = 5e-17
 Identities = 77/241 (31%), Positives = 115/241 (47%), Gaps = 11/241 (4%)
 Frame = +1

Query: 148 DMISYLPQEIRDHIVSFLPLEDAIRTSILSKQWRKVCSTLSNLDF--NQRHFFRLENRNL 321
           D IS LP  +   I+S LP E+AI TS+LSK+WR + + L  L F  N    F  +N + 
Sbjct: 13  DRISDLPDALLLQILSSLPTENAIATSVLSKRWRSLWTMLPKLKFDSNFNPVFDDDNIDP 72

Query: 322 QDFKAFIYQTINLHDESDIELFKLYVDQADDEFVCHISEWVSFAFAHDVRQLQL--WVLD 495
             F   +Y+T++LH    +E   L  +   D    H+  W++ AFA  VR+L L  +  +
Sbjct: 73  TMFSENVYKTLSLHKAPVLESLHLSFEGRTD--CLHVGIWIATAFARGVRKLVLDSFYQE 130

Query: 496 DECQKFPFCLFS-SDSLTSLIL-VNINLKLPKNVKFPNLRYSRFFMVEFFDDDTADQFFS 669
           D+    P  LFS +DSL  L L   I+L  P  V   +LR      V F D+++      
Sbjct: 131 DQTVTLPSVLFSYNDSLEILKLKCAIDLDFPSRVCLKSLRKLYLDQVHFKDEESVCNLLC 190

Query: 670 NCPVLETFRFQTCSMRHHNIFTISAPNLKFLMLETM-----YSPPEIKITSTNLQQIIFN 834
            CP L+       S      FTI++P+L+ L +E +     Y      I +  L+ +  N
Sbjct: 191 GCPSLQDLVVHRYSNADVATFTIASPSLQRLTIEDLRQEGGYGNGSYVINAPGLKYLNIN 250

Query: 835 G 837
           G
Sbjct: 251 G 251


>gb|AAD27915.1| hypothetical protein [Arabidopsis thaliana]
          Length = 454

 Score = 94.0 bits (232), Expect = 5e-17
 Identities = 77/241 (31%), Positives = 115/241 (47%), Gaps = 11/241 (4%)
 Frame = +1

Query: 148 DMISYLPQEIRDHIVSFLPLEDAIRTSILSKQWRKVCSTLSNLDF--NQRHFFRLENRNL 321
           D IS LP  +   I+S LP E+AI TS+LSK+WR + + L  L F  N    F  +N + 
Sbjct: 4   DRISDLPDALLLQILSSLPTENAIATSVLSKRWRSLWTMLPKLKFDSNFNPVFDDDNIDP 63

Query: 322 QDFKAFIYQTINLHDESDIELFKLYVDQADDEFVCHISEWVSFAFAHDVRQLQL--WVLD 495
             F   +Y+T++LH    +E   L  +   D    H+  W++ AFA  VR+L L  +  +
Sbjct: 64  TMFSENVYKTLSLHKAPVLESLHLSFEGRTD--CLHVGIWIATAFARGVRKLVLDSFYQE 121

Query: 496 DECQKFPFCLFS-SDSLTSLIL-VNINLKLPKNVKFPNLRYSRFFMVEFFDDDTADQFFS 669
           D+    P  LFS +DSL  L L   I+L  P  V   +LR      V F D+++      
Sbjct: 122 DQTVTLPSVLFSYNDSLEILKLKCAIDLDFPSRVCLKSLRKLYLDQVHFKDEESVCNLLC 181

Query: 670 NCPVLETFRFQTCSMRHHNIFTISAPNLKFLMLETM-----YSPPEIKITSTNLQQIIFN 834
            CP L+       S      FTI++P+L+ L +E +     Y      I +  L+ +  N
Sbjct: 182 GCPSLQDLVVHRYSNADVATFTIASPSLQRLTIEDLRQEGGYGNGSYVINAPGLKYLNIN 241

Query: 835 G 837
           G
Sbjct: 242 G 242