BLASTX nr result
ID: Coptis23_contig00008198
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00008198
(1133 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004141067.1| PREDICTED: threonine synthase, chloroplastic... 192 2e-53
ref|XP_002285366.1| PREDICTED: threonine synthase, chloroplastic... 191 2e-53
ref|XP_003542066.1| PREDICTED: threonine synthase, chloroplastic... 191 2e-53
ref|XP_003546745.1| PREDICTED: threonine synthase, chloroplastic... 191 2e-53
ref|XP_002947518.1| threonine synthase [Volvox carteri f. nagari... 196 2e-53
>ref|XP_004141067.1| PREDICTED: threonine synthase, chloroplastic-like [Cucumis sativus]
gi|449488071|ref|XP_004157932.1| PREDICTED: threonine
synthase, chloroplastic-like [Cucumis sativus]
Length = 529
Score = 192 bits (487), Expect(2) = 2e-53
Identities = 99/141 (70%), Positives = 112/141 (79%), Gaps = 19/141 (13%)
Frame = +2
Query: 737 LGMTVLVSQVNRMRKLNPNKIVAVACASTGD-------------------LPADKISLAQ 859
LGMTVLVSQVNR+RK+N +V V CASTGD LPADKIS+AQ
Sbjct: 206 LGMTVLVSQVNRLRKMN-RPVVGVGCASTGDTSAALSAYCAAAGIPSIVFLPADKISMAQ 264
Query: 860 LVQAISNGALVLSLDTDFDGCMQLVREITTKVPIYLANSLNSLRLEGQKTAAIEILEQFD 1039
LVQ I+NGA VLS+DTDFDGCM+L+RE+T ++PIYLANSLNSLRLEGQKTAAIEIL+QFD
Sbjct: 265 LVQPIANGAFVLSMDTDFDGCMKLIREVTAELPIYLANSLNSLRLEGQKTAAIEILQQFD 324
Query: 1040 WEVPDWVIVPGGNLENICAFY 1102
WEVPDWVI+PGGNL NI AFY
Sbjct: 325 WEVPDWVIIPGGNLGNIYAFY 345
Score = 45.1 bits (105), Expect(2) = 2e-53
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = +1
Query: 655 GKDNLGMNEVWVKNCGIISHTGSFKDV 735
GK LGMN++WVK+CG ISHTGSFKD+
Sbjct: 181 GKQFLGMNDLWVKHCG-ISHTGSFKDL 206
>ref|XP_002285366.1| PREDICTED: threonine synthase, chloroplastic [Vitis vinifera]
Length = 522
Score = 191 bits (486), Expect(2) = 2e-53
Identities = 100/141 (70%), Positives = 112/141 (79%), Gaps = 19/141 (13%)
Frame = +2
Query: 737 LGMTVLVSQVNRMRKLNPNKIVAVACASTGD-------------------LPADKISLAQ 859
LGMTVLVSQVNR+RK+N +V V CASTGD LPA++IS+AQ
Sbjct: 201 LGMTVLVSQVNRLRKMN-RPVVGVGCASTGDTSAALSAYCAAAGIPSIVFLPANRISIAQ 259
Query: 860 LVQAISNGALVLSLDTDFDGCMQLVREITTKVPIYLANSLNSLRLEGQKTAAIEILEQFD 1039
LVQ I+NGA VLSLDTDFDGCMQL+RE+T ++PIYLANSLNSLRLEGQKTAAIEIL+QFD
Sbjct: 260 LVQPIANGAFVLSLDTDFDGCMQLIREVTAELPIYLANSLNSLRLEGQKTAAIEILQQFD 319
Query: 1040 WEVPDWVIVPGGNLENICAFY 1102
WEVPDWVIVPGGNL NI AFY
Sbjct: 320 WEVPDWVIVPGGNLGNIYAFY 340
Score = 45.1 bits (105), Expect(2) = 2e-53
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = +1
Query: 655 GKDNLGMNEVWVKNCGIISHTGSFKDV 735
GK LGMN++WVK+CG ISHTGSFKD+
Sbjct: 176 GKQFLGMNDLWVKHCG-ISHTGSFKDL 201
>ref|XP_003542066.1| PREDICTED: threonine synthase, chloroplastic-like [Glycine max]
Length = 521
Score = 191 bits (486), Expect(2) = 2e-53
Identities = 100/141 (70%), Positives = 112/141 (79%), Gaps = 19/141 (13%)
Frame = +2
Query: 737 LGMTVLVSQVNRMRKLNPNKIVAVACASTGD-------------------LPADKISLAQ 859
LGMTVLVSQVNR+RK+N +V V CASTGD LPA+KISLAQ
Sbjct: 202 LGMTVLVSQVNRLRKMN-RPVVGVGCASTGDTSAALSAYCASAAIPSIVFLPANKISLAQ 260
Query: 860 LVQAISNGALVLSLDTDFDGCMQLVREITTKVPIYLANSLNSLRLEGQKTAAIEILEQFD 1039
LVQ I+NGA VLS+DTDFDGCMQL+RE+T ++PIYLANSLNSLRLEGQKTAAIEIL+QFD
Sbjct: 261 LVQPIANGAFVLSIDTDFDGCMQLIREVTAELPIYLANSLNSLRLEGQKTAAIEILQQFD 320
Query: 1040 WEVPDWVIVPGGNLENICAFY 1102
W+VPDWVIVPGGNL NI AFY
Sbjct: 321 WQVPDWVIVPGGNLGNIYAFY 341
Score = 45.1 bits (105), Expect(2) = 2e-53
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = +1
Query: 655 GKDNLGMNEVWVKNCGIISHTGSFKDV 735
GK LGMN++WVK+CG ISHTGSFKD+
Sbjct: 177 GKQFLGMNDLWVKHCG-ISHTGSFKDL 202
>ref|XP_003546745.1| PREDICTED: threonine synthase, chloroplastic-like [Glycine max]
Length = 519
Score = 191 bits (486), Expect(2) = 2e-53
Identities = 100/141 (70%), Positives = 112/141 (79%), Gaps = 19/141 (13%)
Frame = +2
Query: 737 LGMTVLVSQVNRMRKLNPNKIVAVACASTGD-------------------LPADKISLAQ 859
LGMTVLVSQVNR+RK+N +V V CASTGD LPA+KISLAQ
Sbjct: 200 LGMTVLVSQVNRLRKMN-RPVVGVGCASTGDTSAALSAYCASAAIPSIVFLPANKISLAQ 258
Query: 860 LVQAISNGALVLSLDTDFDGCMQLVREITTKVPIYLANSLNSLRLEGQKTAAIEILEQFD 1039
LVQ I+NGA VLS+DTDFDGCMQL+RE+T ++PIYLANSLNSLRLEGQKTAAIEIL+QFD
Sbjct: 259 LVQPIANGAFVLSIDTDFDGCMQLIREVTAELPIYLANSLNSLRLEGQKTAAIEILQQFD 318
Query: 1040 WEVPDWVIVPGGNLENICAFY 1102
W+VPDWVIVPGGNL NI AFY
Sbjct: 319 WQVPDWVIVPGGNLGNIYAFY 339
Score = 45.1 bits (105), Expect(2) = 2e-53
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = +1
Query: 655 GKDNLGMNEVWVKNCGIISHTGSFKDV 735
GK LGMN++WVK+CG ISHTGSFKD+
Sbjct: 175 GKQFLGMNDLWVKHCG-ISHTGSFKDL 200
>ref|XP_002947518.1| threonine synthase [Volvox carteri f. nagariensis]
gi|300267382|gb|EFJ51566.1| threonine synthase [Volvox
carteri f. nagariensis]
Length = 505
Score = 196 bits (497), Expect(2) = 2e-53
Identities = 99/141 (70%), Positives = 112/141 (79%), Gaps = 19/141 (13%)
Frame = +2
Query: 737 LGMTVLVSQVNRMRKLNPNKIVAVACASTGD-------------------LPADKISLAQ 859
LGMTVLVSQVNR+RKL P I AV CASTGD LPADKISLAQ
Sbjct: 182 LGMTVLVSQVNRIRKLKPGSITAVGCASTGDTSAALSAYCAAAGIPSIVFLPADKISLAQ 241
Query: 860 LVQAISNGALVLSLDTDFDGCMQLVREITTKVPIYLANSLNSLRLEGQKTAAIEILEQFD 1039
LVQ I+NGALVLS+DTDFDGCM+L++++T + PIYLANS+NSLRLEGQKTAAIEIL+QFD
Sbjct: 242 LVQPIANGALVLSIDTDFDGCMRLIKQVTAETPIYLANSMNSLRLEGQKTAAIEILQQFD 301
Query: 1040 WEVPDWVIVPGGNLENICAFY 1102
W+VPDWVI+PGGNL NI AFY
Sbjct: 302 WQVPDWVIIPGGNLGNIYAFY 322
Score = 40.8 bits (94), Expect(2) = 2e-53
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +1
Query: 655 GKDNLGMNEVWVKNCGIISHTGSFKDV 735
GK+ LGM ++WVK CG SHTGSFKD+
Sbjct: 157 GKEALGMTDLWVKQCG-NSHTGSFKDL 182