BLASTX nr result

ID: Coptis23_contig00008197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008197
         (2074 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17132.3| unnamed protein product [Vitis vinifera]              374   e-101
ref|XP_002272611.1| PREDICTED: uncharacterized protein LOC100267...   374   e-101
ref|XP_002523727.1| conserved hypothetical protein [Ricinus comm...   348   4e-93
ref|XP_002879111.1| predicted protein [Arabidopsis lyrata subsp....   341   4e-91
emb|CAN59836.1| hypothetical protein VITISV_017622 [Vitis vinifera]   298   5e-78

>emb|CBI17132.3| unnamed protein product [Vitis vinifera]
          Length = 935

 Score =  374 bits (961), Expect = e-101
 Identities = 214/397 (53%), Positives = 274/397 (69%), Gaps = 9/397 (2%)
 Frame = -2

Query: 1212 PHFSQGVVVIGFIGKNEEEVTQLMNRVRELDKWFS--IEEGDGV----VKDWFKFRKISY 1051
            P  S+ VVV+GFIG+  ++V+ LMNR+ +L+ + S  +E+G  +    VK WF+ R+ISY
Sbjct: 54   PRPSENVVVVGFIGRRPDDVSHLMNRILDLNAFGSGNLEKGLCIEKEEVKGWFESRRISY 113

Query: 1050 FYEEEKGLVFLLFVPTWNLSMD---EEKEKLDLVVDEYDFGDLQAMLLMFSVCHVIIFLQ 880
            +++EEKG++FL +  T   +M+   +     D  ++E +FGDLQ ML MF+VCHVII++Q
Sbjct: 114  YHDEEKGILFLQYCSTGCPAMEGFLQTDWGFDSALEEREFGDLQGMLFMFAVCHVIIYIQ 173

Query: 879  GGSHFDTQVLKKFRLLQDAKNALVPFVQAQXXXXXXXXXXXXXXXXXXXXXXXSFKNPSP 700
             GS FDTQVLKKFR+LQ AK++L PFV+++                          NPSP
Sbjct: 174  EGSRFDTQVLKKFRVLQAAKHSLAPFVRSRTTPTSISTSRPPSSRPSLSATSS--NNPSP 231

Query: 699  GRLGGNGVTSRXXXXXXXXXXXXXXXXLFPGQCTPVLLFVFLGNFSETTNSGSNIEDSAE 520
            GR  G G ++R                LFPGQC PV LFVFL +FS+  N  SN+++S +
Sbjct: 232  GR--GGGSSNRNTSSISLMSGLGSYASLFPGQCNPVTLFVFLDDFSDVLNPTSNVDESTD 289

Query: 519  TISMNQSSNISGLPRSSLQIKGSSSVVMLSRPLSKSEGGLRKKLQSSLEAQIRFLIKKCR 340
              S NQSS++S L R SL  KGS SVV+L+RP SKSEGG RKKLQSSLEAQIRFLIKKCR
Sbjct: 290  N-SFNQSSSLSNLARPSLPTKGSGSVVVLARPGSKSEGGFRKKLQSSLEAQIRFLIKKCR 348

Query: 339  TLAGSEGSHAGSRGGGNVTSAPLFSLEASRAVALLDRSANQKGQSLDFAAGLVEEVLKSK 160
            TL GSE +H+ SRGGG  +SAPLFSL+ASRAV+LLDRS NQKG+SL+FA  LVE+VL  K
Sbjct: 349  TLTGSE-THSASRGGGVSSSAPLFSLDASRAVSLLDRSTNQKGESLEFATALVEDVLNGK 407

Query: 159  ATSDVLLLESNVQDTNKDDIQYIKEFIYRQSDTLRGR 49
            ATSD LLLES+ Q+ NK+DI  +KEFIYRQSD LRGR
Sbjct: 408  ATSDSLLLESHSQNANKEDILSVKEFIYRQSDILRGR 444


>ref|XP_002272611.1| PREDICTED: uncharacterized protein LOC100267175 [Vitis vinifera]
          Length = 1226

 Score =  374 bits (961), Expect = e-101
 Identities = 214/397 (53%), Positives = 274/397 (69%), Gaps = 9/397 (2%)
 Frame = -2

Query: 1212 PHFSQGVVVIGFIGKNEEEVTQLMNRVRELDKWFS--IEEGDGV----VKDWFKFRKISY 1051
            P  S+ VVV+GFIG+  ++V+ LMNR+ +L+ + S  +E+G  +    VK WF+ R+ISY
Sbjct: 45   PRPSENVVVVGFIGRRPDDVSHLMNRILDLNAFGSGNLEKGLCIEKEEVKGWFESRRISY 104

Query: 1050 FYEEEKGLVFLLFVPTWNLSMD---EEKEKLDLVVDEYDFGDLQAMLLMFSVCHVIIFLQ 880
            +++EEKG++FL +  T   +M+   +     D  ++E +FGDLQ ML MF+VCHVII++Q
Sbjct: 105  YHDEEKGILFLQYCSTGCPAMEGFLQTDWGFDSALEEREFGDLQGMLFMFAVCHVIIYIQ 164

Query: 879  GGSHFDTQVLKKFRLLQDAKNALVPFVQAQXXXXXXXXXXXXXXXXXXXXXXXSFKNPSP 700
             GS FDTQVLKKFR+LQ AK++L PFV+++                          NPSP
Sbjct: 165  EGSRFDTQVLKKFRVLQAAKHSLAPFVRSRTTPTSISTSRPPSSRPSLSATSS--NNPSP 222

Query: 699  GRLGGNGVTSRXXXXXXXXXXXXXXXXLFPGQCTPVLLFVFLGNFSETTNSGSNIEDSAE 520
            GR  G G ++R                LFPGQC PV LFVFL +FS+  N  SN+++S +
Sbjct: 223  GR--GGGSSNRNTSSISLMSGLGSYASLFPGQCNPVTLFVFLDDFSDVLNPTSNVDESTD 280

Query: 519  TISMNQSSNISGLPRSSLQIKGSSSVVMLSRPLSKSEGGLRKKLQSSLEAQIRFLIKKCR 340
              S NQSS++S L R SL  KGS SVV+L+RP SKSEGG RKKLQSSLEAQIRFLIKKCR
Sbjct: 281  N-SFNQSSSLSNLARPSLPTKGSGSVVVLARPGSKSEGGFRKKLQSSLEAQIRFLIKKCR 339

Query: 339  TLAGSEGSHAGSRGGGNVTSAPLFSLEASRAVALLDRSANQKGQSLDFAAGLVEEVLKSK 160
            TL GSE +H+ SRGGG  +SAPLFSL+ASRAV+LLDRS NQKG+SL+FA  LVE+VL  K
Sbjct: 340  TLTGSE-THSASRGGGVSSSAPLFSLDASRAVSLLDRSTNQKGESLEFATALVEDVLNGK 398

Query: 159  ATSDVLLLESNVQDTNKDDIQYIKEFIYRQSDTLRGR 49
            ATSD LLLES+ Q+ NK+DI  +KEFIYRQSD LRGR
Sbjct: 399  ATSDSLLLESHSQNANKEDILSVKEFIYRQSDILRGR 435


>ref|XP_002523727.1| conserved hypothetical protein [Ricinus communis]
            gi|223537031|gb|EEF38667.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1233

 Score =  348 bits (892), Expect = 4e-93
 Identities = 201/412 (48%), Positives = 262/412 (63%), Gaps = 24/412 (5%)
 Frame = -2

Query: 1212 PHFSQGVVVIGFIGKNEEEVTQLMNRVRE--------LDKWFSIEEGDGVVKDWFKFRKI 1057
            P    GV+V+GFI  N +  +QL+NRV +        LDK  SI++ +  +KDWFK+R+I
Sbjct: 39   PRSRDGVIVVGFISHNPDHSSQLINRVLDSNVFGSGHLDKLLSIDKEE--LKDWFKWRRI 96

Query: 1056 SYFYEEEKGLVFLLFVP-----TWNLSMDEEKEKLDLVVDEYDFGDLQAMLLMFS----- 907
            SY+++EEKG +FL F           S     + LD V++E +F DLQ +L MFS     
Sbjct: 97   SYYHDEEKGFLFLQFCSIRCPVVHGSSRSGLLQDLDSVLEENEFEDLQGLLFMFSIFQRT 156

Query: 906  ------VCHVIIFLQGGSHFDTQVLKKFRLLQDAKNALVPFVQAQXXXXXXXXXXXXXXX 745
                  VCHVII++Q G  FD   LKKFR+LQ AK+AL P+V+++               
Sbjct: 157  AQLAMQVCHVIIYIQEGLRFDPHSLKKFRVLQAAKHALAPYVRSRSTPPLPSRPHSSSAS 216

Query: 744  XXXXXXXXSFKNPSPGRLGGNGVTSRXXXXXXXXXXXXXXXXLFPGQCTPVLLFVFLGNF 565
                       + SPGR  G G+ SR                LFPG CTPV+LFVF+ + 
Sbjct: 217  SKPSPST----SSSPGR--GGGIMSRNASAISLMSGLGSYTSLFPGNCTPVILFVFVDDL 270

Query: 564  SETTNSGSNIEDSAETISMNQSSNISGLPRSSLQIKGSSSVVMLSRPLSKSEGGLRKKLQ 385
             +  N  SN+E+S +  S+NQSS++S + R +L  KGS SVV+L+RP++KSEGG RKKLQ
Sbjct: 271  FDMPNPNSNVEESKDVPSLNQSSSMSSVARPNLPTKGSGSVVVLARPVNKSEGGFRKKLQ 330

Query: 384  SSLEAQIRFLIKKCRTLAGSEGSHAGSRGGGNVTSAPLFSLEASRAVALLDRSANQKGQS 205
            SSLEAQIRFLIKKCRTL+GSE  H GSR GG   SAPLFSL+ASRAV LLDR  NQKG+S
Sbjct: 331  SSLEAQIRFLIKKCRTLSGSESGHTGSRSGGVSNSAPLFSLDASRAVVLLDRLLNQKGES 390

Query: 204  LDFAAGLVEEVLKSKATSDVLLLESNVQDTNKDDIQYIKEFIYRQSDTLRGR 49
            L+FA+ LVE++L  KATSD LLLE++ Q+ NK++I  +KEFI+RQSD LRGR
Sbjct: 391  LEFASDLVEDILNGKATSDSLLLENHSQNANKEEIVSVKEFIHRQSDILRGR 442


>ref|XP_002879111.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297324950|gb|EFH55370.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1189

 Score =  341 bits (875), Expect = 4e-91
 Identities = 196/398 (49%), Positives = 255/398 (64%), Gaps = 10/398 (2%)
 Frame = -2

Query: 1212 PHFSQGVVVIGFIGKNEEEVTQLMNRVRE--------LDKWFSIEEGDGVVKDWFKFRKI 1057
            P  S GVVV+GF+ +  ++ + L+N+V +        L+K  ++++ D   +DWF+FRKI
Sbjct: 40   PSSSNGVVVVGFLSRRPDDSSHLINQVLDNNVFGSGKLNKILTVDKPD--FQDWFRFRKI 97

Query: 1056 SYFYEEEKGLVFLLFVPTWNLSMDEEKEK-LDLVVDEYDFGDLQAMLLMFSVCHVIIFLQ 880
             Y++EE+KG+VF+ F P    ++    +   D V++E +FGDLQ +L MFSVCHVII +Q
Sbjct: 98   CYYHEEDKGIVFVQFSPIICPALSSSSDSGFDSVLEEREFGDLQGLLFMFSVCHVIINIQ 157

Query: 879  GGSHFDTQVLKKFRLLQDAKNALVPFVQAQXXXXXXXXXXXXXXXXXXXXXXXSFKNPSP 700
             GS FDT++LKKFR+LQ +K AL PFV++Q                        F     
Sbjct: 158  EGSRFDTRLLKKFRVLQASKQALAPFVRSQTVLPLTSRLHSSSNN---------FSQLHS 208

Query: 699  GRLGGNGVTSRXXXXXXXXXXXXXXXXLFPGQCTPVLLFVFLGNFSETTNSGSNIEDSAE 520
                G G+ SR                LFPGQC PV LFVFL +FS+   S SN+EDS  
Sbjct: 209  ASSRGGGIVSRSGSSVSLKSGGGSYTSLFPGQCNPVTLFVFLDDFSDMLKSSSNVEDSTT 268

Query: 519  TISMN-QSSNISGLPRSSLQIKGSSSVVMLSRPLSKSEGGLRKKLQSSLEAQIRFLIKKC 343
            T S N QS N   L RS L  K S SVV+LSRP SKSEGGLRKKLQSSLEAQ+RFLIKKC
Sbjct: 269  TSSANDQSVNTGKLTRSELPTKNSGSVVVLSRPGSKSEGGLRKKLQSSLEAQVRFLIKKC 328

Query: 342  RTLAGSEGSHAGSRGGGNVTSAPLFSLEASRAVALLDRSANQKGQSLDFAAGLVEEVLKS 163
            RTL GS+ +H GSR G   + APLFSL+AS+AV LLDRS N+KG++L+FA+ LV++VL  
Sbjct: 329  RTLTGSDNNHVGSRSGSISSYAPLFSLDASKAVILLDRS-NKKGEALEFASSLVDDVLNG 387

Query: 162  KATSDVLLLESNVQDTNKDDIQYIKEFIYRQSDTLRGR 49
            KA SD LLLE+N Q + K+D+  +KEFIYR SD LRG+
Sbjct: 388  KANSDSLLLENNCQMSTKEDVLCVKEFIYRCSDILRGK 425


>emb|CAN59836.1| hypothetical protein VITISV_017622 [Vitis vinifera]
          Length = 1252

 Score =  298 bits (762), Expect = 5e-78
 Identities = 169/286 (59%), Positives = 201/286 (70%)
 Frame = -2

Query: 906 VCHVIIFLQGGSHFDTQVLKKFRLLQDAKNALVPFVQAQXXXXXXXXXXXXXXXXXXXXX 727
           VCHVII++Q GS FDTQVLKKFR+LQ AK++L PFV+++                     
Sbjct: 3   VCHVIIYIQEGSRFDTQVLKKFRVLQAAKHSLAPFVRSRTTPTSISTSRPPSSRPSLSAT 62

Query: 726 XXSFKNPSPGRLGGNGVTSRXXXXXXXXXXXXXXXXLFPGQCTPVLLFVFLGNFSETTNS 547
                NPSPGR  G G ++R                LFPGQC PV LFVFL +FS+  N 
Sbjct: 63  SS--NNPSPGR--GGGSSNRNTSSISLMSGLGSYASLFPGQCNPVTLFVFLDDFSDVLNP 118

Query: 546 GSNIEDSAETISMNQSSNISGLPRSSLQIKGSSSVVMLSRPLSKSEGGLRKKLQSSLEAQ 367
            SN+++S +  S NQSS++S L R SL  KGS SVV+L+RP SKSEGG RKKLQSSLEAQ
Sbjct: 119 TSNVDESTDN-SFNQSSSLSNLARPSLPTKGSGSVVVLARPGSKSEGGFRKKLQSSLEAQ 177

Query: 366 IRFLIKKCRTLAGSEGSHAGSRGGGNVTSAPLFSLEASRAVALLDRSANQKGQSLDFAAG 187
           IRFLIKKCRTL GSE +H+ SRGGG  +SAPLFSL+ASRAV+LLDRS NQKG+SL+FA  
Sbjct: 178 IRFLIKKCRTLTGSE-THSASRGGGVSSSAPLFSLDASRAVSLLDRSTNQKGESLEFATA 236

Query: 186 LVEEVLKSKATSDVLLLESNVQDTNKDDIQYIKEFIYRQSDTLRGR 49
           LVE+VL  KATSD LLLES+ Q+ NK+DI  +KEFIYRQSD LRGR
Sbjct: 237 LVEDVLNGKATSDSLLLESHSQNANKEDILSVKEFIYRQSDILRGR 282


Top