BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008167
         (1303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271649.1| PREDICTED: ATP-dependent Clp protease proteo...   429   e-118
ref|XP_003552706.1| PREDICTED: ATP-dependent Clp protease proteo...   426   e-117
gb|ACU19554.1| unknown [Glycine max]                                  423   e-116
ref|XP_003518640.1| PREDICTED: ATP-dependent Clp protease proteo...   422   e-116
ref|XP_004167647.1| PREDICTED: ATP-dependent Clp protease proteo...   413   e-113

>ref|XP_002271649.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
            chloroplastic [Vitis vinifera]
          Length = 320

 Score =  429 bits (1103), Expect = e-118
 Identities = 213/269 (79%), Positives = 234/269 (86%), Gaps = 12/269 (4%)
 Frame = -2

Query: 1047 SRKTISTNWNISN----SAPEWMPRPEELDANNMLLRQRIVFLGSQVDDVTADYIISQLL 880
            SR T+++NW++S+    SAP W+PR E+LD  NMLLRQRIVFLGSQVDD+TAD +ISQLL
Sbjct: 52   SRPTLASNWDLSSLQSASAPTWLPRFEDLDTTNMLLRQRIVFLGSQVDDMTADLVISQLL 111

Query: 879  FLDAEDNTKDIKLFINSPGGSVTAGMGIYDAMKMCKADVSTVCLGLAASMGAFLLASGSK 700
            FLDAED  KDIKLFINSPGGSVTAG+GIYDAMK+CKADVSTVCLGLAASMGAFLLASGSK
Sbjct: 112  FLDAEDQEKDIKLFINSPGGSVTAGLGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSK 171

Query: 699  GKRFCMPNARVMIHQPLGTSGGKASEMGLRIREMMYHKTKLNKILSRITGKPEHQVELDT 520
            GKRFCMPN+RVMIHQPLGT+GGKA+EMG+RIREMMYHK KLNKILSRITGKPE Q+E DT
Sbjct: 172  GKRFCMPNSRVMIHQPLGTAGGKATEMGIRIREMMYHKIKLNKILSRITGKPEQQIEADT 231

Query: 519  DRDNFMNPWEAKEYGLVDAVIDDGKPGLVAPIGDATAPPKTRVWDQWKVEGRRKAMKNLP 340
            DRDNFMN WEAKEYGL+DAVIDDGKPGLVAP  DA  PPKTRVW  WKVEG RKA KNLP
Sbjct: 232  DRDNFMNAWEAKEYGLIDAVIDDGKPGLVAPTADAGPPPKTRVWGLWKVEGSRKAKKNLP 291

Query: 339  SEEKLYQNG--------GQEQEREAAAPV 277
            SE KL QNG        G EQE+EA++PV
Sbjct: 292  SEHKLLQNGHQGGDDEKGTEQEKEASSPV 320


>ref|XP_003552706.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
            chloroplastic-like [Glycine max]
          Length = 322

 Score =  426 bits (1096), Expect = e-117
 Identities = 207/261 (79%), Positives = 233/261 (89%), Gaps = 6/261 (2%)
 Frame = -2

Query: 1071 PISISIKCSRKTISTNWNIS------NSAPEWMPRPEELDANNMLLRQRIVFLGSQVDDV 910
            P+SI +  SR+T+S+NW +S      ++A  W+PR EELDA NMLLRQRI+FLGSQVDD+
Sbjct: 42   PLSI-VNASRQTLSSNWLVSPHDFSASTASPWLPRFEELDATNMLLRQRIIFLGSQVDDM 100

Query: 909  TADYIISQLLFLDAEDNTKDIKLFINSPGGSVTAGMGIYDAMKMCKADVSTVCLGLAASM 730
            TAD+IISQLLFLDAED+ KDIKLFINSPGGSVTAGMGIYDAMK+CKADVSTVCLGLAASM
Sbjct: 101  TADFIISQLLFLDAEDSKKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASM 160

Query: 729  GAFLLASGSKGKRFCMPNARVMIHQPLGTSGGKASEMGLRIREMMYHKTKLNKILSRITG 550
            GAF+LASG+KGKR+CMPN+RVMIHQPLGT+GGKA+EM +RIREM YHK K+NKILSRITG
Sbjct: 161  GAFILASGTKGKRYCMPNSRVMIHQPLGTAGGKATEMSIRIREMAYHKIKINKILSRITG 220

Query: 549  KPEHQVELDTDRDNFMNPWEAKEYGLVDAVIDDGKPGLVAPIGDATAPPKTRVWDQWKVE 370
            KPE Q+ELDTDRDNFMNPWEAKEYGLVD VIDDGKPGLVAPIGDA+ PPKTRVWDQWK+E
Sbjct: 221  KPEEQIELDTDRDNFMNPWEAKEYGLVDGVIDDGKPGLVAPIGDASPPPKTRVWDQWKIE 280

Query: 369  GRRKAMKNLPSEEKLYQNGGQ 307
            G RKA KNLPSE K  QN  +
Sbjct: 281  GSRKAKKNLPSEHKFLQNASK 301


>gb|ACU19554.1| unknown [Glycine max]
          Length = 322

 Score =  423 bits (1088), Expect = e-116
 Identities = 206/261 (78%), Positives = 231/261 (88%), Gaps = 6/261 (2%)
 Frame = -2

Query: 1071 PISISIKCSRKTISTNWNIS------NSAPEWMPRPEELDANNMLLRQRIVFLGSQVDDV 910
            P+SI +  SR+T+S+NW +S      ++A  W+PR EELDA NMLLRQRI+FLGSQVDD+
Sbjct: 42   PLSI-VNASRQTLSSNWLVSPHDFSASTASPWLPRFEELDATNMLLRQRIIFLGSQVDDM 100

Query: 909  TADYIISQLLFLDAEDNTKDIKLFINSPGGSVTAGMGIYDAMKMCKADVSTVCLGLAASM 730
            TAD+IISQLLFLDAED+ KDIKLFIN PGGSVTAGMGIYDAMK+CKADVSTVCLGLAASM
Sbjct: 101  TADFIISQLLFLDAEDSKKDIKLFINPPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASM 160

Query: 729  GAFLLASGSKGKRFCMPNARVMIHQPLGTSGGKASEMGLRIREMMYHKTKLNKILSRITG 550
            GAF+LASG+KGKR+CMPN+RVMIHQPLGT+GGKA+EM +RIREM YHK K+NKILSRITG
Sbjct: 161  GAFILASGTKGKRYCMPNSRVMIHQPLGTAGGKATEMSIRIREMAYHKIKINKILSRITG 220

Query: 549  KPEHQVELDTDRDNFMNPWEAKEYGLVDAVIDDGKPGLVAPIGDATAPPKTRVWDQWKVE 370
            KPE Q+ELDTDRDNFMNPWEAKEYGLVD VIDDGKPGLVAPIGDA  PPKTRVWDQWK+E
Sbjct: 221  KPEEQIELDTDRDNFMNPWEAKEYGLVDGVIDDGKPGLVAPIGDAFPPPKTRVWDQWKIE 280

Query: 369  GRRKAMKNLPSEEKLYQNGGQ 307
            G RKA KNLPSE K  QN  +
Sbjct: 281  GSRKAKKNLPSEHKFLQNASK 301


>ref|XP_003518640.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
            chloroplastic-like [Glycine max]
          Length = 319

 Score =  422 bits (1085), Expect = e-116
 Identities = 204/261 (78%), Positives = 232/261 (88%), Gaps = 6/261 (2%)
 Frame = -2

Query: 1071 PISISIKCSRKTISTNWNIS------NSAPEWMPRPEELDANNMLLRQRIVFLGSQVDDV 910
            P+S+ +  SR+T+S+NW +S      ++A  W+PR EELDA NMLLRQRI+FLGSQVDD+
Sbjct: 42   PLSV-VNASRQTLSSNWLVSPHDFSASTASPWLPRFEELDATNMLLRQRIIFLGSQVDDM 100

Query: 909  TADYIISQLLFLDAEDNTKDIKLFINSPGGSVTAGMGIYDAMKMCKADVSTVCLGLAASM 730
            TAD+IISQLLFLDAED+ KDIKLFINSPGGSVTAGMGIYDAMK+CKADVSTVCLGLAASM
Sbjct: 101  TADFIISQLLFLDAEDSKKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASM 160

Query: 729  GAFLLASGSKGKRFCMPNARVMIHQPLGTSGGKASEMGLRIREMMYHKTKLNKILSRITG 550
            GAF+LASG+KGKR+CMPN+RVMIHQPLGT+GGKA+EM +RIREM YHK K+NKILSRITG
Sbjct: 161  GAFILASGTKGKRYCMPNSRVMIHQPLGTAGGKATEMSIRIREMAYHKIKINKILSRITG 220

Query: 549  KPEHQVELDTDRDNFMNPWEAKEYGLVDAVIDDGKPGLVAPIGDATAPPKTRVWDQWKVE 370
            KPE Q+ELDTDRDNFMNPWEAKEYGLVD VIDDGKPGLVAPIGD++ PPKTRVWD WK+E
Sbjct: 221  KPEEQIELDTDRDNFMNPWEAKEYGLVDGVIDDGKPGLVAPIGDSSPPPKTRVWDLWKIE 280

Query: 369  GRRKAMKNLPSEEKLYQNGGQ 307
            G RKA KNLPSE K  QN  +
Sbjct: 281  GSRKAKKNLPSEHKFLQNASK 301


>ref|XP_004167647.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
            chloroplastic-like [Cucumis sativus]
          Length = 339

 Score =  413 bits (1062), Expect = e-113
 Identities = 209/282 (74%), Positives = 231/282 (81%), Gaps = 16/282 (5%)
 Frame = -2

Query: 1074 NPISISIKCSRKTISTNW----NISNSAPEWMPRPEELDANNMLLRQRIVFLGSQVDDVT 907
            N  S S    R+T+S+NW    N S S+   +PR EELD  NMLLRQRI+FLGSQVDD+T
Sbjct: 58   NHPSHSSSSLRRTLSSNWDVFSNYSVSSARSLPRFEELDTTNMLLRQRIIFLGSQVDDMT 117

Query: 906  ADYIISQLLFLDAEDNTKDIKLFINSPGGSVTAGMGIYDAMKMCKADVSTVCLGLAASMG 727
            AD+IISQLLFLDAED TKDIKLFINSPGGSVTAGMGIYDAMK+CKADVSTVCLGLAASMG
Sbjct: 118  ADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMG 177

Query: 726  AFLLASGSKGKRFCMPNARVMIHQPLGTSGGKASEMGLRIREMMYHKTKLNKILSRITGK 547
            AFLLASGSKGKRFCMPN RVMIHQPLGT+GGKA+EM +RIREM YHK KLNKI SRITGK
Sbjct: 178  AFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGK 237

Query: 546  PEHQVELDTDRDNFMNPWEAKEYGLVDAVIDDGKPGLVAPIGDATAPPKTRVWDQWKVEG 367
            P  Q+ELDT+RDNFMNPWEAKEYGL+D VIDDGKPGL+API +AT PPKTR+WD WKVEG
Sbjct: 238  PIEQIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRIWDLWKVEG 297

Query: 366  RRKAMKNLPSEEKLYQNG------------GQEQEREAAAPV 277
             RKA KNLPSE K+ +NG            G +QE E  +PV
Sbjct: 298  SRKAKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSPV 339