BLASTX nr result
ID: Coptis23_contig00008162
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00008162
(1960 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285583.1| PREDICTED: glutamyl-tRNA reductase 1, chloro... 759 0.0
ref|XP_004148403.1| PREDICTED: glutamyl-tRNA reductase 1, chloro... 751 0.0
ref|XP_004167725.1| PREDICTED: LOW QUALITY PROTEIN: glutamyl-tRN... 749 0.0
ref|XP_002509995.1| Glutamyl-tRNA reductase 1, chloroplast precu... 736 0.0
gb|AAD16897.1| glutamyl-tRNA reductase precursor [Glycine max] 728 0.0
>ref|XP_002285583.1| PREDICTED: glutamyl-tRNA reductase 1, chloroplastic [Vitis vinifera]
gi|147816412|emb|CAN77439.1| hypothetical protein
VITISV_007402 [Vitis vinifera]
Length = 545
Score = 759 bits (1961), Expect = 0.0
Identities = 398/520 (76%), Positives = 443/520 (85%), Gaps = 8/520 (1%)
Frame = -1
Query: 1852 SSYSNSSQFRMICKPKRT--FLFRSGGV--TRCEAVSD----NNNNKISSLSALEQLKAS 1697
SS +SSQ+R+ CKP RT L + G +RCE SD ++ + SS+SALEQLK S
Sbjct: 26 SSSRSSSQYRIFCKPARTRRSLIQRGASLNSRCEVASDALVDTDSTRSSSVSALEQLKTS 85
Query: 1696 GADRYTKEKSSIIVLGLSIHTTPVEMREKLAIPEAEWPRAIGELCGLNHIEEAGVLSTCN 1517
ADRYTKE+SSI+V+GLSIHTTPVEMREKLAIPEAEWPRAIGELC LNHIEEA VLSTCN
Sbjct: 86 AADRYTKERSSIVVIGLSIHTTPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCN 145
Query: 1516 RMEIYVVALSWHRGVRELTEWMAKTSGIPASELRRHLFMLRDGDATQHLFEVSAGLDSLV 1337
RMEIYVVALS HRGV+E+TEWM+KTSG+P SEL H F+L + DATQHLFEVSAGLDSLV
Sbjct: 146 RMEIYVVALSQHRGVKEVTEWMSKTSGVPVSELCHHRFLLYNKDATQHLFEVSAGLDSLV 205
Query: 1336 LGEGQILAQVKQVVKSGEGVNGFGRNISGLFKHAITVGKRVRTETNIXXXXXXXXXXXVE 1157
LGEGQILAQVKQVVK G+GV GFGRNISGLFKHAITVGKRVRTETNI VE
Sbjct: 206 LGEGQILAQVKQVVKVGQGVVGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVE 265
Query: 1156 LAIMKLPQNSSATARVLVVGAGKMGKLVIKHLVAKGWTKIVVVNRSEERVEAIREEMRDI 977
LA+MKLP++S ATAR+LV+GAGKMGKLVIKHLVAKG TK+V+VNR EERV AIREEM+D+
Sbjct: 266 LALMKLPESSHATARMLVIGAGKMGKLVIKHLVAKGCTKMVIVNRGEERVAAIREEMKDV 325
Query: 976 EIIYKPLTEMLACAGESDVVFTSTASETLLFTKENVETLPPVGSINGGSRLFVDISVPRN 797
EIIY+PLTEMLACA E+DVVFTSTASET LF KE+V+ LP VG GG RLFVDISVPRN
Sbjct: 326 EIIYRPLTEMLACAAEADVVFTSTASETPLFLKEHVKDLPAVGQDVGGLRLFVDISVPRN 385
Query: 796 VGSCVSDVENTRVYNVDDLKEVVAANKEDRNRKAMEAQVIITEESKQFGAWRDSLETVPT 617
VG+CVSD+E RVYNVDDLKEVVAANKEDR RKAMEAQ IITEESKQF AWRDSLETVPT
Sbjct: 386 VGACVSDLETARVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFEAWRDSLETVPT 445
Query: 616 IKKLRALVEGIRMTELERCFSKIGDDIPKKTRAAIEGLSRGMMNKVLHGPMQHLRCDGSD 437
IKKLRA E IR+ ELE+C SK+GDDI KKTR A++ LSRG++NK+LHGPMQHLRCDGSD
Sbjct: 446 IKKLRAYAERIRVAELEKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSD 505
Query: 436 CSQLSETLENMHALNRMFSLETEASVLGQKVRAKVEQSQK 317
LSETLENMHALNRMFSLETE S+L QK+RAKVEQ+QK
Sbjct: 506 SRTLSETLENMHALNRMFSLETEISLLEQKIRAKVEQTQK 545
>ref|XP_004148403.1| PREDICTED: glutamyl-tRNA reductase 1, chloroplastic-like [Cucumis
sativus] gi|2495155|sp|P93111.1|HEM11_CUCSA RecName:
Full=Glutamyl-tRNA reductase 1, chloroplastic;
Short=GluTR; Flags: Precursor gi|1694926|dbj|BAA08910.1|
glutamyl-tRNA reductase [Cucumis sativus]
Length = 552
Score = 751 bits (1939), Expect = 0.0
Identities = 399/545 (73%), Positives = 452/545 (82%), Gaps = 23/545 (4%)
Frame = -1
Query: 1882 SMAAVKTMMESSYSNSSQFRMI--------CKPKRT--FLFRSGGVT-----RCEAVSDN 1748
S A ++ ++ S SNSS R + CK RT LF+ GV+ +CE S +
Sbjct: 8 SGAKLEALLFKSASNSSSTRNLSSSHLPGFCKSIRTRRILFQRTGVSSFTPFKCELASSD 67
Query: 1747 ---NNNKI-----SSLSALEQLKASGADRYTKEKSSIIVLGLSIHTTPVEMREKLAIPEA 1592
N++I S+LSALEQLK S DRYTKE+SSI+V+GLSIHTTPVEMREKLAIPEA
Sbjct: 68 VLVQNDEIDPPKSSNLSALEQLKTSAVDRYTKERSSIVVIGLSIHTTPVEMREKLAIPEA 127
Query: 1591 EWPRAIGELCGLNHIEEAGVLSTCNRMEIYVVALSWHRGVRELTEWMAKTSGIPASELRR 1412
EWPRAIGELCGLNHIEEA VLSTCNRMEIYVVALS HRGV+E+TEWM+KTSGIP SE+ +
Sbjct: 128 EWPRAIGELCGLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVSEICQ 187
Query: 1411 HLFMLRDGDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKSGEGVNGFGRNISGLFKHAI 1232
H F+L + DATQH+FEVSAGLDSLVLGEGQILAQVKQVVK G+GV GFGRNISGLFKHAI
Sbjct: 188 HRFLLYNNDATQHIFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVAGFGRNISGLFKHAI 247
Query: 1231 TVGKRVRTETNIXXXXXXXXXXXVELAIMKLPQNSSATARVLVVGAGKMGKLVIKHLVAK 1052
TVGKRVRTETNI VELA+MKLP+ S ATAR+LV+GAGKMGKLVIKHLVAK
Sbjct: 248 TVGKRVRTETNIAAGAVSVSSAAVELALMKLPEPSHATARMLVIGAGKMGKLVIKHLVAK 307
Query: 1051 GWTKIVVVNRSEERVEAIREEMRDIEIIYKPLTEMLACAGESDVVFTSTASETLLFTKEN 872
G TK+VVVNRSEERV AIREEM+D+EIIYKPLTEML+C E+DV+FTSTASE+LLFTKE
Sbjct: 308 GCTKMVVVNRSEERVTAIREEMKDVEIIYKPLTEMLSCTAEADVIFTSTASESLLFTKEQ 367
Query: 871 VETLPPVGSINGGSRLFVDISVPRNVGSCVSDVENTRVYNVDDLKEVVAANKEDRNRKAM 692
V+ LPPVG GG RLF+DISVPRNVG+C++++E+ RVYNVDDLKEVVAANKEDR RKAM
Sbjct: 368 VKDLPPVGHDVGGLRLFIDISVPRNVGACINNLEDVRVYNVDDLKEVVAANKEDRLRKAM 427
Query: 691 EAQVIITEESKQFGAWRDSLETVPTIKKLRALVEGIRMTELERCFSKIGDDIPKKTRAAI 512
EAQ IITEESKQF AWRDSLETVPTIKKLRA E IR ELE+C SK+GDDIPKKTR A+
Sbjct: 428 EAQSIITEESKQFEAWRDSLETVPTIKKLRAYAERIRTAELEKCLSKMGDDIPKKTRRAV 487
Query: 511 EGLSRGMMNKVLHGPMQHLRCDGSDCSQLSETLENMHALNRMFSLETEASVLGQKVRAKV 332
+ LSRG++NK+LHGPMQHLRCDGSD LSETLENMHALNRMFSLETE +VL QK+RAKV
Sbjct: 488 DDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMHALNRMFSLETEIAVLEQKIRAKV 547
Query: 331 EQSQK 317
EQ+QK
Sbjct: 548 EQNQK 552
>ref|XP_004167725.1| PREDICTED: LOW QUALITY PROTEIN: glutamyl-tRNA reductase 1,
chloroplastic-like [Cucumis sativus]
Length = 552
Score = 749 bits (1933), Expect = 0.0
Identities = 398/545 (73%), Positives = 451/545 (82%), Gaps = 23/545 (4%)
Frame = -1
Query: 1882 SMAAVKTMMESSYSNSSQFRMI--------CKPKRT--FLFRSGGVT-----RCEAVSDN 1748
S A ++ ++ S SNSS R + CK RT LF+ GV+ +CE S +
Sbjct: 8 SGAKLEALLFKSASNSSSTRNLSSSHLPGFCKSIRTRRILFQRTGVSSFTPFKCELASSD 67
Query: 1747 ---NNNKI-----SSLSALEQLKASGADRYTKEKSSIIVLGLSIHTTPVEMREKLAIPEA 1592
N++I S+LSALEQLK S DRYTKE+SSI+V+GLSIHTTPVEMREKLAIPEA
Sbjct: 68 VLVQNDEIDPPKSSNLSALEQLKTSAVDRYTKERSSIVVIGLSIHTTPVEMREKLAIPEA 127
Query: 1591 EWPRAIGELCGLNHIEEAGVLSTCNRMEIYVVALSWHRGVRELTEWMAKTSGIPASELRR 1412
EWPRAIGELCGLNHIEEA VLSTCNRMEIYVVALS HRGV+E+TEWM+KTSGIP SE+ +
Sbjct: 128 EWPRAIGELCGLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVSEICQ 187
Query: 1411 HLFMLRDGDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKSGEGVNGFGRNISGLFKHAI 1232
H F+L + DATQH+FEVSAGLDSLVLGEGQILAQVKQVVK G+GV GFGRNISGLFKHAI
Sbjct: 188 HRFLLYNNDATQHIFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVAGFGRNISGLFKHAI 247
Query: 1231 TVGKRVRTETNIXXXXXXXXXXXVELAIMKLPQNSSATARVLVVGAGKMGKLVIKHLVAK 1052
TVGKRVRTETNI VELA+MKLP+ S ATAR+LV+GAGKMGKLVIKHLVAK
Sbjct: 248 TVGKRVRTETNIAAGAVSVSSAAVELALMKLPEPSHATARMLVIGAGKMGKLVIKHLVAK 307
Query: 1051 GWTKIVVVNRSEERVEAIREEMRDIEIIYKPLTEMLACAGESDVVFTSTASETLLFTKEN 872
G TK+VVVNRSEERV AIREEM+D+EIIYKPLTEML+C E+DV+FTSTASE+LLFTKE
Sbjct: 308 GCTKMVVVNRSEERVTAIREEMKDVEIIYKPLTEMLSCTAEADVIFTSTASESLLFTKEQ 367
Query: 871 VETLPPVGSINGGSRLFVDISVPRNVGSCVSDVENTRVYNVDDLKEVVAANKEDRNRKAM 692
V+ LPPVG GG RLF+DISVPRNVG+C++++E+ RVYNVDDLKEVVAANKEDR RKAM
Sbjct: 368 VKDLPPVGHDVGGLRLFIDISVPRNVGACINNLEDVRVYNVDDLKEVVAANKEDRLRKAM 427
Query: 691 EAQVIITEESKQFGAWRDSLETVPTIKKLRALVEGIRMTELERCFSKIGDDIPKKTRAAI 512
EAQ IITEESKQF AWRDSLETVPTI KLRA E IR ELE+C SK+GDDIPKKTR A+
Sbjct: 428 EAQSIITEESKQFEAWRDSLETVPTIXKLRAYAERIRTAELEKCLSKMGDDIPKKTRRAV 487
Query: 511 EGLSRGMMNKVLHGPMQHLRCDGSDCSQLSETLENMHALNRMFSLETEASVLGQKVRAKV 332
+ LSRG++NK+LHGPMQHLRCDGSD LSETLENMHALNRMFSLETE +VL QK+RAKV
Sbjct: 488 DDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMHALNRMFSLETEIAVLEQKIRAKV 547
Query: 331 EQSQK 317
EQ+QK
Sbjct: 548 EQNQK 552
>ref|XP_002509995.1| Glutamyl-tRNA reductase 1, chloroplast precursor, putative [Ricinus
communis] gi|223550696|gb|EEF52182.1| Glutamyl-tRNA
reductase 1, chloroplast precursor, putative [Ricinus
communis]
Length = 565
Score = 736 bits (1900), Expect = 0.0
Identities = 394/561 (70%), Positives = 447/561 (79%), Gaps = 37/561 (6%)
Frame = -1
Query: 1897 TGFATSMAAVKT---MMESSYSNSS--------------QFRMICKPKRT---------- 1799
+GFAT+++ K ++ SS S+SS + R+ CKP R
Sbjct: 5 SGFATTLSGAKMEALLLNSSASSSSSGCSSFRTHLVSVPKIRVFCKPSRNNTNDNGKYRR 64
Query: 1798 FLFRSGGVTRCEAVSDNNNN----------KISSLSALEQLKASGADRYTKEKSSIIVLG 1649
L + GV RCE V+ ++ K+SSLSALEQLK S ADRYTKE++SI+V+G
Sbjct: 65 VLAQRAGV-RCEVVASTDSAVETDSNIDPAKVSSLSALEQLKTSAADRYTKERASIVVIG 123
Query: 1648 LSIHTTPVEMREKLAIPEAEWPRAIGELCGLNHIEEAGVLSTCNRMEIYVVALSWHRGVR 1469
LS+HT PVEMREKLAIPEAEWPRAIGELC LNHI+EA VLSTCNRMEIYVVALS HRGV+
Sbjct: 124 LSVHTAPVEMREKLAIPEAEWPRAIGELCSLNHIDEAAVLSTCNRMEIYVVALSQHRGVK 183
Query: 1468 ELTEWMAKTSGIPASELRRHLFMLRDGDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKS 1289
E+TEWM+KTSGIP SE+ H F+L + DATQHLFEVSAGLDSLVLGEGQILAQVKQVVK
Sbjct: 184 EVTEWMSKTSGIPVSEICEHQFLLYNNDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKV 243
Query: 1288 GEGVNGFGRNISGLFKHAITVGKRVRTETNIXXXXXXXXXXXVELAIMKLPQNSSATARV 1109
G+GV GFGRNISGLFKHAI+VGKRVRTETNI VELA+MKLP++S ATAR+
Sbjct: 244 GQGVVGFGRNISGLFKHAISVGKRVRTETNIAAGAVSVSSAAVELALMKLPESSHATARM 303
Query: 1108 LVVGAGKMGKLVIKHLVAKGWTKIVVVNRSEERVEAIREEMRDIEIIYKPLTEMLACAGE 929
LV+GAGKMGKLVIKHLVAKG TK+VVVNRSEERV AIREE++D+EIIYKPL EML CA E
Sbjct: 304 LVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREEIKDVEIIYKPLDEMLTCAAE 363
Query: 928 SDVVFTSTASETLLFTKENVETLPPVGSINGGSRLFVDISVPRNVGSCVSDVENTRVYNV 749
+DVVFTSTASET LF KENV+ LP V S G RLFVDISVPRNVGSCV+DVE RVYNV
Sbjct: 364 ADVVFTSTASETPLFLKENVKDLPSVSSEVGSLRLFVDISVPRNVGSCVNDVEKARVYNV 423
Query: 748 DDLKEVVAANKEDRNRKAMEAQVIITEESKQFGAWRDSLETVPTIKKLRALVEGIRMTEL 569
DDLKEVVAANKEDR RKAMEAQ IITEESKQF AWRDSLETVPTIKKLRA E IR+ EL
Sbjct: 424 DDLKEVVAANKEDRLRKAMEAQAIITEESKQFEAWRDSLETVPTIKKLRAYAERIRVAEL 483
Query: 568 ERCFSKIGDDIPKKTRAAIEGLSRGMMNKVLHGPMQHLRCDGSDCSQLSETLENMHALNR 389
++C SK+G++IPKKTR A++ LSRG++NK+LHGPMQHLRCDGSD LSETLENMHALNR
Sbjct: 484 DKCLSKMGEEIPKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMHALNR 543
Query: 388 MFSLETEASVLGQKVRAKVEQ 326
MFSLETE +VL QK+RAK Q
Sbjct: 544 MFSLETEVAVLEQKLRAKTSQ 564
>gb|AAD16897.1| glutamyl-tRNA reductase precursor [Glycine max]
Length = 542
Score = 728 bits (1880), Expect = 0.0
Identities = 376/511 (73%), Positives = 428/511 (83%), Gaps = 5/511 (0%)
Frame = -1
Query: 1843 SNSSQFRMICKPKRTFLFRSGGVTRCEAVSDNN-----NNKISSLSALEQLKASGADRYT 1679
+ ++ CK ++T + G RCEA S ++ K +S+SALEQLK S ADRYT
Sbjct: 30 TTTTHLSCFCKTRKTLVQSQRGPIRCEASSASDVVADATKKAASVSALEQLKTSAADRYT 89
Query: 1678 KEKSSIIVLGLSIHTTPVEMREKLAIPEAEWPRAIGELCGLNHIEEAGVLSTCNRMEIYV 1499
KE+SS++V+GLS+H+TPVEMREKLAIPEAEWPRAI ELC LNHIEEA VLSTCNRMEIYV
Sbjct: 90 KERSSVMVIGLSVHSTPVEMREKLAIPEAEWPRAIAELCSLNHIEEAAVLSTCNRMEIYV 149
Query: 1498 VALSWHRGVRELTEWMAKTSGIPASELRRHLFMLRDGDATQHLFEVSAGLDSLVLGEGQI 1319
VALS HRGV+E+TEWM+KTSGIP ++L +H F+L + DATQHLFEVSAGLDSLVLGEGQI
Sbjct: 150 VALSKHRGVKEVTEWMSKTSGIPVADLCQHQFLLYNKDATQHLFEVSAGLDSLVLGEGQI 209
Query: 1318 LAQVKQVVKSGEGVNGFGRNISGLFKHAITVGKRVRTETNIXXXXXXXXXXXVELAIMKL 1139
LAQVKQVVK G+GVNGFGRNISGLFKHAITVGKRVRTETNI VELA+MKL
Sbjct: 210 LAQVKQVVKVGQGVNGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVELALMKL 269
Query: 1138 PQNSSATARVLVVGAGKMGKLVIKHLVAKGWTKIVVVNRSEERVEAIREEMRDIEIIYKP 959
P+ S A AR+LV+GAGKMGKLVIKHLVAKG TK+VVVNRSEERV AIREE++D+EIIYKP
Sbjct: 270 PEASHANARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIREEIKDVEIIYKP 329
Query: 958 LTEMLACAGESDVVFTSTASETLLFTKENVETLPPVGSINGGSRLFVDISVPRNVGSCVS 779
L+EML C GE+DVVFTSTASE LF K++V+ LPP GG RLFVDISVPRNVGSC+S
Sbjct: 330 LSEMLTCIGEADVVFTSTASENPLFLKDDVKELPPATDEVGGRRLFVDISVPRNVGSCLS 389
Query: 778 DVENTRVYNVDDLKEVVAANKEDRNRKAMEAQVIITEESKQFGAWRDSLETVPTIKKLRA 599
D+E+ RVYNVDDLKEVVAANKEDR RKAMEAQ II EESKQF AWRDSLETVPTIKKLRA
Sbjct: 390 DLESVRVYNVDDLKEVVAANKEDRLRKAMEAQAIIGEESKQFEAWRDSLETVPTIKKLRA 449
Query: 598 LVEGIRMTELERCFSKIGDDIPKKTRAAIEGLSRGMMNKVLHGPMQHLRCDGSDCSQLSE 419
E IR+ ELE+C K+GDDI KKT+ A++ LSRG++NK+LHGPMQHLRCDGSD LSE
Sbjct: 450 YAERIRLAELEKCLGKMGDDINKKTQRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSE 509
Query: 418 TLENMHALNRMFSLETEASVLGQKVRAKVEQ 326
TLENMHALNRMF+LETE SVL QK+RAKVEQ
Sbjct: 510 TLENMHALNRMFNLETEISVLEQKIRAKVEQ 540